RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 ITGB1P05556 798 aa10.65□□□□□ -0.7
TUBGCP4-202ENST00000561691 ITGAVP06756 1048 aa10.65□□□□□ -0.7
TUBGCP4-202ENST00000561691 RARGP13631 454 aa10.65□□□□□ -0.7
TUBGCP4-202ENST00000561691 HOXD10P28358 340 aa10.65□□□□□ -0.7
TUBGCP4-202ENST00000561691 ABL2P42684 1182 aa10.65□□□□□ -0.7
TUBGCP4-202ENST00000561691 MAGEA8P43361 318 aa10.65□□□□□ -0.7
TUBGCP4-202ENST00000561691 RABGGTBP53611 331 aa10.65□□□□□ -0.7
TUBGCP4-202ENST00000561691 GDF10P55107 478 aa10.65□□□□□ -0.7
TUBGCP4-202ENST00000561691 FAM189BP81408 668 aa10.65□□□□□ -0.7
TUBGCP4-202ENST00000561691 OTUD4Q01804 1114 aaKnown RBP10.65□□□□□ -0.7
TUBGCP4-202ENST00000561691 LAMB3Q13751 1172 aa10.65□□□□□ -0.7
TUBGCP4-202ENST00000561691 MDH1BQ5I0G3 518 aa10.65□□□□□ -0.7
TUBGCP4-202ENST00000561691 HIBCHQ6NVY1 386 aaPredicted RBP10.65□□□□□ -0.7
TUBGCP4-202ENST00000561691 BHLHA9Q7RTU4 235 aa10.65□□□□□ -0.7
TUBGCP4-202ENST00000561691 SPATA21Q7Z572 469 aa10.65□□□□□ -0.7
TUBGCP4-202ENST00000561691 RBM12BQ8IXT5 1001 aaKnown RBP10.65□□□□□ -0.7
TUBGCP4-202ENST00000561691 TMEM86AQ8N2M4 240 aa10.65□□□□□ -0.7
TUBGCP4-202ENST00000561691 ARFGAP2Q8N6H7 521 aa10.65□□□□□ -0.7
TUBGCP4-202ENST00000561691 ACTL9Q8TC94 416 aa10.65□□□□□ -0.7
TUBGCP4-202ENST00000561691 RAET1EQ8TD07 263 aa10.65□□□□□ -0.7
TUBGCP4-202ENST00000561691 TEKT4Q8WW24 435 aa10.65□□□□□ -0.7
TUBGCP4-202ENST00000561691 NT5C3BQ969T7 300 aa10.65□□□□□ -0.7
TUBGCP4-202ENST00000561691 HAUS1Q96CS2 278 aa10.65□□□□□ -0.7
TUBGCP4-202ENST00000561691 FAF2Q96CS3 445 aa10.65□□□□□ -0.7
TUBGCP4-202ENST00000561691 SMOQ99835 787 aa10.65□□□□□ -0.7
TUBGCP4-202ENST00000561691 C10orf88Q9H8K7 445 aa10.65□□□□□ -0.7
TUBGCP4-202ENST00000561691 GPATCH2LQ9NWQ4 482 aa10.65□□□□□ -0.7
TUBGCP4-202ENST00000561691 DDX43Q9NXZ2 648 aaKnown RBP10.65□□□□□ -0.7
TUBGCP4-202ENST00000561691 PHF24Q9UPV7 400 aa10.65□□□□□ -0.7
TUBGCP4-202ENST00000561691 I3L4J1 428 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 M0QZQ0 153 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 RIPK2O43353 540 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 RNF8O76064 485 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 GAS8O95995 478 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 POMCP01189 267 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 FYNP06241 537 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 PYGBP11216 843 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 IMPDH2P12268 514 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 LCP1P13796 627 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 NPR3P17342 541 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 NDUFV1P49821 464 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 CDK7P50613 346 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 PITX1P78337 314 aaPredicted RBP10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 ATP11AP98196 1134 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 RAB41Q5JT25 222 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 ARMC3Q5W041 872 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 GPRIN1Q7Z2K8 1008 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 B4GALNT2Q8NHY0 566 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 ZNF296Q8WUU4 475 aaPredicted RBP10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 UBLCP1Q8WVY7 318 aaPredicted RBP10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 HSPH1Q92598 858 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 SYT15Q9BQS2 421 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 SNRNP25Q9BV90 132 aaKnown RBP10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 PCDH18Q9HCL0 1135 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 PPANQ9NQ55 473 aaKnown RBP10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 PAPOLBQ9NRJ5 636 aaKnown RBP10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 RGS18Q9NS28 235 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 ZFATQ9P243 1243 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 ASIC3Q9UHC3 531 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 SLC12A4Q9UP95 1085 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 MDM4O15151 490 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 LUC7L3O95232 432 aaKnown RBP10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 ATF2P15336 505 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 CETN2P41208 172 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 ACADSBP45954 432 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 BRCC3P46736 316 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 HTRA3P83110 453 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 CDO1Q16878 200 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 TNFAIP8L3Q5GJ75 292 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 CLLU1OSQ5K130 101 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 FAM171BQ6P995 826 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 NPNTQ6UXI9 565 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 FAM35AQ86V20 835 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 RELL1Q8IUW5 271 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 APLFQ8IW19 511 aaPredicted RBP10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 HACE1Q8IYU2 909 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 GALNT15Q8N3T1 639 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 PLD5Q8N7P1 536 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 RNF169Q8NCN4 708 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 SLAIN1Q8ND83 568 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 AGAP11Q8TF27 550 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 PCED1BQ96HM7 432 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 RNF157Q96PX1 679 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 SLC2A13Q96QE2 648 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 TBCBQ99426 244 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 TMEM121Q9BTD3 319 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 TMEM109Q9BVC6 243 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 FRMD8P1Q9BZ68 369 aaPredicted RBP10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 TMLHEQ9NVH6 421 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 USP3Q9Y6I4 520 aa10.64□□□□□ -0.71
TUBGCP4-202ENST00000561691 CFAP73A6NFT4 308 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 DCDC2CA8MYV0 355 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 ZNF487B1APH4 448 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 APOC4-APOC2K7ER74 178 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 DNALI1O14645 258 aaPredicted RBP10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 NRP1O14786 923 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 APOC2P02655 101 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 CDC25CP30307 473 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 SDC4P31431 198 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms