RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 TRNP1Q6NT89 227 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 C8orf74Q6P047 294 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 CC2D1AQ6P1N0 951 aaPredicted RBP7.87□□□□□ -1.15
TPM1-231ENST00000561395 WDR93Q6P2C0 686 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 FAM171BQ6P995 826 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 CLEC20AQ6ZU45 233 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 SLC26A9Q7LBE3 791 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 POLNQ7Z5Q5 900 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 SLC13A5Q86YT5 568 aaPredicted RBP7.87□□□□□ -1.15
TPM1-231ENST00000561395 CCDC105Q8IYK2 499 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 CMTR2Q8IYT2 770 aaKnown RBP7.87□□□□□ -1.15
TPM1-231ENST00000561395 EMC1Q8N766 993 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 FLCNQ8NFG4 579 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 OR10T2Q8NGX3 314 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 EXD1Q8NHP7 514 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 MYCBPAPQ8TBZ2 947 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 KCTD13Q8WZ19 329 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 MYLPFQ96A32 169 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 PCED1BQ96HM7 432 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 RBM41Q96IZ5 413 aaKnown RBP7.87□□□□□ -1.15
TPM1-231ENST00000561395 FAM193BQ96PV7 902 aaPredicted RBP7.87□□□□□ -1.15
TPM1-231ENST00000561395 KRT12Q99456 494 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 PKMYT1Q99640 499 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 SMOQ99835 787 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 HINFPQ9BQA5 517 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 CNPY3Q9BT09 278 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 MED10Q9BTT4 135 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 LRRC1Q9BTT6 524 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 APOL5Q9BWW9 433 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 AP1M1Q9BXS5 423 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 MRPL9Q9BYD2 267 aaKnown RBP7.87□□□□□ -1.15
TPM1-231ENST00000561395 NRDE2Q9H7Z3 1164 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 KRT82Q9NSB4 513 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 ARGLU1Q9NWB6 273 aaPredicted RBP7.87□□□□□ -1.15
TPM1-231ENST00000561395 PRG3Q9Y2Y8 225 aaPredicted RBP7.87□□□□□ -1.15
TPM1-231ENST00000561395 NR2E1Q9Y466 385 aa7.87□□□□□ -1.15
TPM1-231ENST00000561395 PKD1L2Q7Z442 2459 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 CCDC151A5D8V7 595 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 C2CD4DB7Z1M9 353 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 NRP1O14786 923 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 FSCN2O14926 492 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 SYN3O14994 580 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 TRAPPC3O43617 180 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 PHF2O75151 1096 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 BEST1O76090 585 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 KRT1P04264 644 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 LCP1P13796 627 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 PDGFRAP16234 1089 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 MCM3P25205 808 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 PTPN7P35236 360 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 PCK1P35558 622 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 GJC1P36383 396 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 FLT3P36888 993 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 SLC11A1P49279 550 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 VSNL1P62760 191 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 TSPY1Q01534 308 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 YWHAHQ04917 246 aaPredicted RBP7.86□□□□□ -1.15
TPM1-231ENST00000561395 ADIGQ0VDE8 80 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 BRD3Q15059 726 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 TAF5Q15542 800 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 MAPRE1Q15691 268 aaKnown RBP7.86□□□□□ -1.15
TPM1-231ENST00000561395 PPP2R5EQ16537 467 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 DUSP6Q16828 381 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 ARCQ7LC44 396 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 PIGZQ86VD9 579 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 SCUBE3Q8IX30 993 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 THEM5Q8N1Q8 247 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 LRRC43Q8N309 656 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 ARFGAP1Q8N6T3 406 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 CLEC4CQ8WTT0 213 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 RXFP2Q8WXD0 754 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 SMARCD1Q96GM5 515 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 SLITRK1Q96PX8 696 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 CDCA3Q99618 268 aaPredicted RBP7.86□□□□□ -1.15
TPM1-231ENST00000561395 TMEM175Q9BSA9 504 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 HERPUD2Q9BSE4 406 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 DDX47Q9H0S4 455 aaKnown RBP7.86□□□□□ -1.15
TPM1-231ENST00000561395 S1PR5Q9H228 398 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 SEMA4AQ9H3S1 761 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 SLITRK6Q9H5Y7 841 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 TMEM30AQ9NV96 361 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 TMLHEQ9NVH6 421 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.86□□□□□ -1.15
TPM1-231ENST00000561395 ASNSD1Q9NWL6 643 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 DDX56Q9NY93 547 aaKnown RBP7.86□□□□□ -1.15
TPM1-231ENST00000561395 STIM2Q9P246 746 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 CDH22Q9UJ99 828 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 ADAM28Q9UKQ2 775 aa7.86□□□□□ -1.15
TPM1-231ENST00000561395 MYO16Q9Y6X6 1858 aa7.85□□□□□ -1.15
TPM1-231ENST00000561395 DOCK8Q8NF50 2099 aa7.85□□□□□ -1.15
TPM1-231ENST00000561395 SF3B1O75533 1304 aaKnown RBP eCLIP7.85□□□□□ -1.15
TPM1-231ENST00000561395 TCRBV7S2A1N4TA0A589 114 aa7.85□□□□□ -1.15
TPM1-231ENST00000561395 TBKBP1A7MCY6 615 aa7.85□□□□□ -1.15
TPM1-231ENST00000561395 HHLA1C9JL84 531 aa7.85□□□□□ -1.15
TPM1-231ENST00000561395 SART1O43290 800 aaKnown RBP7.85□□□□□ -1.15
TPM1-231ENST00000561395 RAD51CO43502 376 aa7.85□□□□□ -1.15
TPM1-231ENST00000561395 TADA2AO75478 443 aa7.85□□□□□ -1.15
TPM1-231ENST00000561395 DAB1O75553 588 aa7.85□□□□□ -1.15
TPM1-231ENST00000561395 GRAP2O75791 330 aa7.85□□□□□ -1.15
TPM1-231ENST00000561395 FBXO21O94952 628 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms