RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 KDSRQ06136 332 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 MESP2Q0VG99 397 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 DMP1Q13316 513 aaPredicted RBP5.73□□□□□ -1.49
HERC1-213ENST00000561359 ZNF211Q13398 564 aaPredicted RBP5.73□□□□□ -1.49
HERC1-213ENST00000561359 MYBPC2Q14324 1141 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 SETDB1Q15047 1291 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 EPHA7Q15375 998 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 ZNF77Q15935 545 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 INF2Q27J81 1249 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 INAVAQ3KP66 663 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 SLC39A12Q504Y0 691 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 ATF7IP2Q5U623 682 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 KIAA1614Q5VZ46 1190 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 CDCA2Q69YH5 1023 aaPredicted RBP5.73□□□□□ -1.49
HERC1-213ENST00000561359 NCAPH2Q6IBW4 605 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 OVOS1Q6IE37 1185 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 TRMT11Q7Z4G4 463 aaKnown RBP5.73□□□□□ -1.49
HERC1-213ENST00000561359 TMEM150AQ86TG1 271 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 C1orf127Q8N9H9 656 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 SH3RF2Q8TEC5 729 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 RUFY2Q8WXA3 655 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 PMEPA1Q969W9 287 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 ZMAT2Q96NC0 199 aaKnown RBP5.73□□□□□ -1.49
HERC1-213ENST00000561359 CYP2S1Q96SQ9 504 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 ANP32EQ9BTT0 268 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 AKTIPQ9H8T0 292 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 GPRC5CQ9NQ84 441 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 ARHGEF4Q9NR80 690 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 CNTN3Q9P232 1028 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 DDX25Q9UHL0 483 aaKnown RBP5.73□□□□□ -1.49
HERC1-213ENST00000561359 VAV3Q9UKW4 847 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 PCDHGA1Q9Y5H4 931 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 PTPRDP23468 1912 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 TSC2P49815 1807 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 NID2Q14112 1375 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 TRAV19A0A0A6YYK7 116 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 TBC1D3BA6NDS4 549 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 BTBD18B2RXH4 712 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 CCER2I3L3R5 266 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 M0QZQ0 153 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 ENC1O14682 589 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 KLK10O43240 276 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 SLC37A4O43826 429 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 RFPL3O75679 317 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 USP17L7P0C7H9 530 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 CDK4P11802 303 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 NCAM1P13591 858 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 KCNE1P15382 129 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 NOS3P29474 1203 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 TNFSF9P41273 254 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 GRIA2P42262 883 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 TNFRSF4P43489 277 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 CSNK1EP49674 416 aaKnown RBP5.72□□□□□ -1.49
HERC1-213ENST00000561359 CCT8P50990 548 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 NLRP5P59047 1200 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 AKAP17AQ02040 695 aaKnown RBP5.72□□□□□ -1.49
HERC1-213ENST00000561359 RESTQ13127 1097 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 GAB4Q2WGN9 574 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 XKR4Q5GH76 650 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 HIST2H2BCQ6DN03 193 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 XKR5Q6UX68 686 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 KIAA1324Q6UXG2 1013 aaKnown RBP5.72□□□□□ -1.49
HERC1-213ENST00000561359 ALKAL1Q6UXT8 129 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 DSTYKQ6XUX3 929 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 DHX40Q8IX18 779 aaKnown RBP5.72□□□□□ -1.49
HERC1-213ENST00000561359 CEP120Q8N960 986 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 CCDC148Q8NFR7 591 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 DEPTORQ8TB45 409 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 KCNE4Q8WWG9 221 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 DNASE2BQ8WZ79 361 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 LIN37Q96GY3 246 aaPredicted RBP5.72□□□□□ -1.49
HERC1-213ENST00000561359 DRC1Q96MC2 740 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 FAM20AQ96MK3 541 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 SLC22A12Q96S37 553 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.72□□□□□ -1.49
HERC1-213ENST00000561359 GPR174Q9BXC1 333 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 C22orf23Q9BZE7 217 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 TMEM206Q9H813 350 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 ANKEF1Q9NU02 776 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 HSPBP1Q9NZL4 362 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 HSFX1Q9UBD0 423 aa5.72□□□□□ -1.49
HERC1-213ENST00000561359 RBM8AQ9Y5S9 174 aaKnown RBP5.72□□□□□ -1.49
HERC1-213ENST00000561359 MYO18AQ92614 2054 aaKnown RBP5.71□□□□□ -1.49
HERC1-213ENST00000561359 A0A087WWV3 80 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 SCO2A0A1W2PP80 73 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 E2F8A0AVK6 867 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 ANO9A1A5B4 782 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 CBX4O00257 560 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 KCNK3O14649 394 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 SUV39H1O43463 412 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 PCDHGA12O60330 932 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 PHACTR2O75167 634 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 ALX3O95076 343 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 CYP17A1P05093 508 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 EDN1P05305 212 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 C1SP09871 688 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 H2AFB1P0C5Y9 115 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 H2AFB2P0C5Z0 115 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 GLB1P16278 677 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 HMGA1P17096 107 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms