RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 ATXN2Q99700 1313 aaKnown RBP11.34□□□□□ -0.59
TPM1-227ENST00000560970 TCRBV21S2A2A0A5A6 115 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 E2F8A0AVK6 867 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 ANTXRLA6NF34 631 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 CLDN5O00501 218 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 CDX4O14627 284 aaPredicted RBP11.33□□□□□ -0.6
TPM1-227ENST00000560970 TNFRSF10BO14763 440 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 GIPC1O14908 333 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 HOXC11O43248 304 aaPredicted RBP11.33□□□□□ -0.6
TPM1-227ENST00000560970 COCHO43405 550 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 FAM163BP0C2L3 166 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 CEACAM1P13688 526 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 PTPN1P18031 435 aaKnown RBP11.33□□□□□ -0.6
TPM1-227ENST00000560970 YWHAQP27348 245 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 HOXD12P35452 270 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 GRIA2P42262 883 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 KIR2DL1P43626 348 aaPredicted RBP11.33□□□□□ -0.6
TPM1-227ENST00000560970 FMO5P49326 533 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 SLC5A3P53794 718 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 MESP2Q0VG99 397 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 PREPLQ4J6C6 727 aaPredicted RBP11.33□□□□□ -0.6
TPM1-227ENST00000560970 TRIM61Q5EBN2 209 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 CCDC183Q5T5S1 534 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 PEAR1Q5VY43 1037 aaPredicted RBP11.33□□□□□ -0.6
TPM1-227ENST00000560970 LYSMD4Q5XG99 296 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 C11orf57Q6ZUT1 292 aaPredicted RBP11.33□□□□□ -0.6
TPM1-227ENST00000560970 ARMCX6Q7L4S7 300 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 TRMT11Q7Z4G4 463 aaKnown RBP11.33□□□□□ -0.6
TPM1-227ENST00000560970 ETFBKMTQ8IXQ9 262 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 NUP93Q8N1F7 819 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 PHTF2Q8N3S3 785 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 FBXL13Q8NEE6 735 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 HMGB4Q8WW32 186 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 PIGKQ92643 395 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 TAF4BQ92750 862 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 TATDN2Q93075 761 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 TWNKQ96RR1 684 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 ARID3AQ99856 593 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 NUSAP1Q9BXS6 441 aaKnown RBP11.33□□□□□ -0.6
TPM1-227ENST00000560970 B3GNT5Q9BYG0 378 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 NIF3L1Q9GZT8 377 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 METTL14Q9HCE5 456 aaKnown RBP11.33□□□□□ -0.6
TPM1-227ENST00000560970 KRT82Q9NSB4 513 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 COQ4Q9Y3A0 265 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 SH3BP1Q9Y3L3 701 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 CACNA1EQ15878 2313 aa11.33□□□□□ -0.6
TPM1-227ENST00000560970 PTPRBP23467 1997 aa11.32□□□□□ -0.6
TPM1-227ENST00000560970 TMEM8BA6NDV4 472 aa11.32□□□□□ -0.6
TPM1-227ENST00000560970 C1QTNF9BB2RNN3 333 aa11.32□□□□□ -0.6
TPM1-227ENST00000560970 STX10O60499 249 aa11.32□□□□□ -0.6
TPM1-227ENST00000560970 ADAM23O75077 832 aa11.32□□□□□ -0.6
TPM1-227ENST00000560970 C1QTNF9P0C862 333 aa11.32□□□□□ -0.6
TPM1-227ENST00000560970 SLC6A11P48066 632 aa11.32□□□□□ -0.6
TPM1-227ENST00000560970 NDST1P52848 882 aa11.32□□□□□ -0.6
TPM1-227ENST00000560970 GAD2Q05329 585 aa11.32□□□□□ -0.6
TPM1-227ENST00000560970 INCA1Q0VD86 236 aa11.32□□□□□ -0.6
TPM1-227ENST00000560970 BYSLQ13895 437 aaKnown RBP11.32□□□□□ -0.6
TPM1-227ENST00000560970 SPDYCQ5MJ68 293 aa11.32□□□□□ -0.6
TPM1-227ENST00000560970 LY6G5CQ5SRR4 150 aa11.32□□□□□ -0.6
TPM1-227ENST00000560970 HECTD3Q5T447 861 aa11.32□□□□□ -0.6
TPM1-227ENST00000560970 BTBD8Q5XKL5 378 aa11.32□□□□□ -0.6
TPM1-227ENST00000560970 RHBDF2Q6PJF5 856 aa11.32□□□□□ -0.6
TPM1-227ENST00000560970 SYT12Q8IV01 421 aa11.32□□□□□ -0.6
TPM1-227ENST00000560970 ADGRG2Q8IZP9 1017 aa11.32□□□□□ -0.6
TPM1-227ENST00000560970 TERB1Q8NA31 727 aa11.32□□□□□ -0.6
TPM1-227ENST00000560970 RLN3Q8WXF3 142 aa11.32□□□□□ -0.6
TPM1-227ENST00000560970 TNIP3Q96KP6 325 aa11.32□□□□□ -0.6
TPM1-227ENST00000560970 IMPG2Q9BZV3 1241 aa11.32□□□□□ -0.6
TPM1-227ENST00000560970 ZDHHC4Q9NPG8 344 aa11.32□□□□□ -0.6
TPM1-227ENST00000560970 WASF3Q9UPY6 502 aa11.32□□□□□ -0.6
TPM1-227ENST00000560970 PKD1L2Q7Z442 2459 aa11.31□□□□□ -0.6
TPM1-227ENST00000560970 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.31□□□□□ -0.6
TPM1-227ENST00000560970 MAP3K13O43283 966 aa11.31□□□□□ -0.6
TPM1-227ENST00000560970 CILPO75339 1184 aa11.31□□□□□ -0.6
TPM1-227ENST00000560970 TULP3O75386 442 aa11.31□□□□□ -0.6
TPM1-227ENST00000560970 GNA14O95837 355 aa11.31□□□□□ -0.6
TPM1-227ENST00000560970 P4HA1P13674 534 aa11.31□□□□□ -0.6
TPM1-227ENST00000560970 HOXB2P14652 356 aa11.31□□□□□ -0.6
TPM1-227ENST00000560970 ENGP17813 658 aa11.31□□□□□ -0.6
TPM1-227ENST00000560970 CD58P19256 250 aa11.31□□□□□ -0.6
TPM1-227ENST00000560970 PTGER3P43115 390 aa11.31□□□□□ -0.6
TPM1-227ENST00000560970 TNFRSF4P43489 277 aa11.31□□□□□ -0.6
TPM1-227ENST00000560970 MAPK8P45983 427 aa11.31□□□□□ -0.6
TPM1-227ENST00000560970 IRX4P78413 519 aa11.31□□□□□ -0.6
TPM1-227ENST00000560970 KCNH2Q12809 1159 aa11.31□□□□□ -0.6
TPM1-227ENST00000560970 LRMPQ12912 555 aa11.31□□□□□ -0.6
TPM1-227ENST00000560970 MAP7D1Q3KQU3 841 aa11.31□□□□□ -0.6
TPM1-227ENST00000560970 UAP1L1Q3KQV9 507 aa11.31□□□□□ -0.6
TPM1-227ENST00000560970 HSP90AA4PQ58FG1 418 aa11.31□□□□□ -0.6
TPM1-227ENST00000560970 C10orf76Q5T2E6 689 aa11.31□□□□□ -0.6
TPM1-227ENST00000560970 SNX30Q5VWJ9 437 aa11.31□□□□□ -0.6
TPM1-227ENST00000560970 CAVIN1Q6NZI2 390 aaKnown RBP11.31□□□□□ -0.6
TPM1-227ENST00000560970 PAQR9Q6ZVX9 377 aa11.31□□□□□ -0.6
TPM1-227ENST00000560970 ACOT1Q86TX2 421 aa11.31□□□□□ -0.6
TPM1-227ENST00000560970 BBS7Q8IWZ6 715 aa11.31□□□□□ -0.6
TPM1-227ENST00000560970 TMEFF1Q8IYR6 380 aa11.31□□□□□ -0.6
TPM1-227ENST00000560970 ZNF513Q8N8E2 541 aaPredicted RBP11.31□□□□□ -0.6
TPM1-227ENST00000560970 DEFB124Q8NES8 71 aa11.31□□□□□ -0.6
TPM1-227ENST00000560970 LMO3Q8TAP4 145 aa11.31□□□□□ -0.6
TPM1-227ENST00000560970 KCNV2Q8TDN2 545 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms