RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 CYP27A1Q02318 531 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 RAD51AP2Q09MP3 1159 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 TAF10Q12962 218 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 MAPK7Q13164 816 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 TOB2Q14106 344 aaPredicted RBP10.14□□□□□ -0.79
HERC1-210ENST00000560897 TRIM29Q14134 588 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 NUMA1Q14980 2115 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 MAPRE1Q15691 268 aaKnown RBP10.14□□□□□ -0.79
HERC1-210ENST00000560897 ECM1Q16610 540 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 RINT1Q6NUQ1 792 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 INO80CQ6PI98 192 aaPredicted RBP10.14□□□□□ -0.79
HERC1-210ENST00000560897 XKR5Q6UX68 686 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 TPGS1Q6ZTW0 290 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 ADGRF2Q8IZF7 708 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 PDZD8Q8NEN9 1154 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 SNX29Q8TEQ0 813 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 TNFRSF25Q93038 417 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 MYLPFQ96A32 169 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 VCPIP1Q96JH7 1222 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 TTLL2Q9BWV7 592 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 RAB34Q9BZG1 259 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 LRWD1Q9UFC0 647 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 CPSF3Q9UKF6 684 aaKnown RBP10.14□□□□□ -0.79
HERC1-210ENST00000560897 R3HCC1Q9Y3T6 440 aaKnown RBP10.14□□□□□ -0.79
HERC1-210ENST00000560897 SLCO1B1Q9Y6L6 691 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 DOPEY1Q5JWR5 2465 aa10.14□□□□□ -0.79
HERC1-210ENST00000560897 E9PMD0 336 aa10.13□□□□□ -0.79
HERC1-210ENST00000560897 WNT7AO00755 349 aa10.13□□□□□ -0.79
HERC1-210ENST00000560897 KRT38O76015 456 aa10.13□□□□□ -0.79
HERC1-210ENST00000560897 DXOO77932 396 aaKnown RBP10.13□□□□□ -0.79
HERC1-210ENST00000560897 SEMA4FO95754 770 aa10.13□□□□□ -0.79
HERC1-210ENST00000560897 SFTPCP11686 197 aa10.13□□□□□ -0.79
HERC1-210ENST00000560897 CKMT2P17540 419 aa10.13□□□□□ -0.79
HERC1-210ENST00000560897 AFMP43652 599 aa10.13□□□□□ -0.79
HERC1-210ENST00000560897 NOP14P78316 857 aaKnown RBP10.13□□□□□ -0.79
HERC1-210ENST00000560897 INSM1Q01101 510 aaPredicted RBP10.13□□□□□ -0.79
HERC1-210ENST00000560897 ARID5AQ03989 594 aa10.13□□□□□ -0.79
HERC1-210ENST00000560897 GOLGA8FQ08AF8 430 aa10.13□□□□□ -0.79
HERC1-210ENST00000560897 GOLGA8DPQ0D2H9 430 aa10.13□□□□□ -0.79
HERC1-210ENST00000560897 HS1BP3Q53T59 392 aa10.13□□□□□ -0.79
HERC1-210ENST00000560897 HECTD3Q5T447 861 aa10.13□□□□□ -0.79
HERC1-210ENST00000560897 RUFY3Q7L099 469 aa10.13□□□□□ -0.79
HERC1-210ENST00000560897 CCDC83Q8IWF9 413 aa10.13□□□□□ -0.79
HERC1-210ENST00000560897 DIS3L2Q8IYB7 885 aaKnown RBP10.13□□□□□ -0.79
HERC1-210ENST00000560897 KCNB2Q92953 911 aa10.13□□□□□ -0.79
HERC1-210ENST00000560897 DEPDC7Q96QD5 511 aa10.13□□□□□ -0.79
HERC1-210ENST00000560897 PKMYT1Q99640 499 aa10.13□□□□□ -0.79
HERC1-210ENST00000560897 SYT15Q9BQS2 421 aa10.13□□□□□ -0.79
HERC1-210ENST00000560897 LARP6Q9BRS8 491 aaKnown RBP10.13□□□□□ -0.79
HERC1-210ENST00000560897 TRIM9Q9C026 710 aa10.13□□□□□ -0.79
HERC1-210ENST00000560897 BTBD1Q9H0C5 482 aa10.13□□□□□ -0.79
HERC1-210ENST00000560897 LHX5Q9H2C1 402 aa10.13□□□□□ -0.79
HERC1-210ENST00000560897 LARSQ9P2J5 1176 aaKnown RBP10.13□□□□□ -0.79
HERC1-210ENST00000560897 LSM7Q9UK45 103 aaKnown RBP10.13□□□□□ -0.79
HERC1-210ENST00000560897 FARP1Q9Y4F1 1045 aaPredicted RBP10.13□□□□□ -0.79
HERC1-210ENST00000560897 PCDHB1Q9Y5F3 818 aa10.13□□□□□ -0.79
HERC1-210ENST00000560897 CYP46A1Q9Y6A2 500 aa10.13□□□□□ -0.79
HERC1-210ENST00000560897 ANKRD17O75179 2603 aaKnown RBP10.13□□□□□ -0.79
HERC1-210ENST00000560897 VILLO15195 856 aa10.12□□□□□ -0.79
HERC1-210ENST00000560897 COCHO43405 550 aa10.12□□□□□ -0.79
HERC1-210ENST00000560897 SUV39H1O43463 412 aa10.12□□□□□ -0.79
HERC1-210ENST00000560897 FAM189A1O60320 539 aa10.12□□□□□ -0.79
HERC1-210ENST00000560897 USP12O75317 370 aa10.12□□□□□ -0.79
HERC1-210ENST00000560897 GUCY2CP25092 1073 aa10.12□□□□□ -0.79
HERC1-210ENST00000560897 RBMS1P29558 406 aaKnown RBP10.12□□□□□ -0.79
HERC1-210ENST00000560897 CDC25AP30304 524 aa10.12□□□□□ -0.79
HERC1-210ENST00000560897 POLR2BP30876 1174 aaKnown RBP10.12□□□□□ -0.79
HERC1-210ENST00000560897 ACOT2P49753 483 aa10.12□□□□□ -0.79
HERC1-210ENST00000560897 INHBCP55103 352 aa10.12□□□□□ -0.79
HERC1-210ENST00000560897 PSMC1P62191 440 aaKnown RBP10.12□□□□□ -0.79
HERC1-210ENST00000560897 RACK1P63244 317 aaKnown RBP10.12□□□□□ -0.79
HERC1-210ENST00000560897 DAB2P98082 770 aa10.12□□□□□ -0.79
HERC1-210ENST00000560897 TLE1Q04724 770 aa10.12□□□□□ -0.79
HERC1-210ENST00000560897 GRIN1Q05586 938 aa10.12□□□□□ -0.79
HERC1-210ENST00000560897 ORC2Q13416 577 aaPredicted RBP10.12□□□□□ -0.79
HERC1-210ENST00000560897 CCDC142Q17RM4 750 aa10.12□□□□□ -0.79
HERC1-210ENST00000560897 ZSCAN23Q3MJ62 389 aa10.12□□□□□ -0.79
HERC1-210ENST00000560897 KCNT1Q5JUK3 1230 aa10.12□□□□□ -0.79
HERC1-210ENST00000560897 PRAMEF14Q5SWL7 426 aa10.12□□□□□ -0.79
HERC1-210ENST00000560897 KRT79Q5XKE5 535 aa10.12□□□□□ -0.79
HERC1-210ENST00000560897 C1orf186Q6ZWK4 172 aa10.12□□□□□ -0.79
HERC1-210ENST00000560897 NT5DC4Q86YG4 428 aa10.12□□□□□ -0.79
HERC1-210ENST00000560897 TOP6BLQ8N6T0 577 aa10.12□□□□□ -0.79
HERC1-210ENST00000560897 NSUN7Q8NE18 718 aaKnown RBP10.12□□□□□ -0.79
HERC1-210ENST00000560897 SAP25Q8TEE9 199 aa10.12□□□□□ -0.79
HERC1-210ENST00000560897 FBXO32Q969P5 355 aa10.12□□□□□ -0.79
HERC1-210ENST00000560897 BIRC7Q96CA5 298 aa10.12□□□□□ -0.79
HERC1-210ENST00000560897 DUSP9Q99956 384 aaKnown RBP10.12□□□□□ -0.79
HERC1-210ENST00000560897 POLR1BQ9H9Y6 1135 aa10.12□□□□□ -0.79
HERC1-210ENST00000560897 GDF3Q9NR23 364 aa10.12□□□□□ -0.79
HERC1-210ENST00000560897 STARD5Q9NSY2 213 aa10.12□□□□□ -0.79
HERC1-210ENST00000560897 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.12□□□□□ -0.79
HERC1-210ENST00000560897 CDH9Q9ULB4 789 aa10.12□□□□□ -0.79
HERC1-210ENST00000560897 AGAP1Q9UPQ3 857 aa10.12□□□□□ -0.79
HERC1-210ENST00000560897 SNX9Q9Y5X1 595 aa10.12□□□□□ -0.79
HERC1-210ENST00000560897 CKAP5Q14008 2032 aa10.11□□□□□ -0.79
HERC1-210ENST00000560897 ABCA12Q86UK0 2595 aa10.11□□□□□ -0.79
HERC1-210ENST00000560897 A0A0B4J269 797 aa10.11□□□□□ -0.79
HERC1-210ENST00000560897 F8VP50 259 aa10.11□□□□□ -0.79
HERC1-210ENST00000560897 K7ENM7 598 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms