RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 KSR2Q6VAB6 950 aa4.43□□□□□ -1.7
SPG11-218ENST00000559754 RANBP10Q6VN20 620 aa4.43□□□□□ -1.7
SPG11-218ENST00000559754 SESTD1Q86VW0 696 aa4.43□□□□□ -1.7
SPG11-218ENST00000559754 LIX1LQ8IVB5 337 aa4.43□□□□□ -1.7
SPG11-218ENST00000559754 C12orf76Q8N812 135 aaPredicted RBP4.43□□□□□ -1.7
SPG11-218ENST00000559754 PNPLA1Q8N8W4 532 aa4.43□□□□□ -1.7
SPG11-218ENST00000559754 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.43□□□□□ -1.7
SPG11-218ENST00000559754 COQ8BQ96D53 544 aa4.43□□□□□ -1.7
SPG11-218ENST00000559754 ZDHHC12Q96GR4 267 aa4.43□□□□□ -1.7
SPG11-218ENST00000559754 HIST1H2AAQ96QV6 131 aa4.43□□□□□ -1.7
SPG11-218ENST00000559754 BTBD1Q9H0C5 482 aa4.43□□□□□ -1.7
SPG11-218ENST00000559754 TERF2IPQ9NYB0 399 aa4.43□□□□□ -1.7
SPG11-218ENST00000559754 RIMKLBQ9ULI2 386 aa4.43□□□□□ -1.7
SPG11-218ENST00000559754 CAPN11Q9UMQ6 739 aa4.43□□□□□ -1.7
SPG11-218ENST00000559754 FRMPD2Q68DX3 1309 aaPredicted RBP4.43□□□□□ -1.7
SPG11-218ENST00000559754 CCDC189A1A4V9 331 aa4.42□□□□□ -1.7
SPG11-218ENST00000559754 KRTAP29-1A8MX34 341 aaPredicted RBP4.42□□□□□ -1.7
SPG11-218ENST00000559754 VSTM5A8MXK1 200 aa4.42□□□□□ -1.7
SPG11-218ENST00000559754 FOXN3O00409 490 aaPredicted RBP4.42□□□□□ -1.7
SPG11-218ENST00000559754 IL1R1P14778 569 aa4.42□□□□□ -1.7
SPG11-218ENST00000559754 TXNL4AP83876 142 aaKnown RBP4.42□□□□□ -1.7
SPG11-218ENST00000559754 TWIST1Q15672 202 aa4.42□□□□□ -1.7
SPG11-218ENST00000559754 CC2D1BQ5T0F9 858 aaKnown RBP4.42□□□□□ -1.7
SPG11-218ENST00000559754 PLAG1Q6DJT9 500 aa4.42□□□□□ -1.7
SPG11-218ENST00000559754 SHC4Q6S5L8 630 aa4.42□□□□□ -1.7
SPG11-218ENST00000559754 UNC13DQ70J99 1090 aa4.42□□□□□ -1.7
SPG11-218ENST00000559754 MAP4K1Q92918 833 aa4.42□□□□□ -1.7
SPG11-218ENST00000559754 WDYHV1Q96HA8 205 aa4.42□□□□□ -1.7
SPG11-218ENST00000559754 HIC2Q96JB3 615 aa4.42□□□□□ -1.7
SPG11-218ENST00000559754 ZC3H10Q96K80 434 aaKnown RBP4.42□□□□□ -1.7
SPG11-218ENST00000559754 STRBPQ96SI9 672 aaKnown RBP4.42□□□□□ -1.7
SPG11-218ENST00000559754 ARPC5LQ9BPX5 153 aa4.42□□□□□ -1.7
SPG11-218ENST00000559754 PRDM11Q9NQV5 511 aa4.42□□□□□ -1.7
SPG11-218ENST00000559754 ZNF212Q9UDV6 495 aa4.42□□□□□ -1.7
SPG11-218ENST00000559754 DDX20Q9UHI6 824 aaKnown RBP4.42□□□□□ -1.7
SPG11-218ENST00000559754 AFG3L2Q9Y4W6 797 aa4.42□□□□□ -1.7
SPG11-218ENST00000559754 MYMKA6NI61 221 aa4.41□□□□□ -1.7
SPG11-218ENST00000559754 IKBKBO14920 756 aa4.41□□□□□ -1.7
SPG11-218ENST00000559754 KCNAB3O43448 404 aa4.41□□□□□ -1.7
SPG11-218ENST00000559754 TRIM27P14373 513 aa4.41□□□□□ -1.7
SPG11-218ENST00000559754 RBL1P28749 1068 aa4.41□□□□□ -1.7
SPG11-218ENST00000559754 POLGP54098 1239 aaPredicted RBP4.41□□□□□ -1.7
SPG11-218ENST00000559754 EIF4A1P60842 406 aaKnown RBP4.41□□□□□ -1.7
SPG11-218ENST00000559754 ID2Q02363 134 aa4.41□□□□□ -1.7
SPG11-218ENST00000559754 MFSD13AQ14CX5 517 aa4.41□□□□□ -1.7
SPG11-218ENST00000559754 TMTC4Q5T4D3 741 aa4.41□□□□□ -1.7
SPG11-218ENST00000559754 C10orf25Q5T742 122 aa4.41□□□□□ -1.7
SPG11-218ENST00000559754 DEF8Q6ZN54 512 aa4.41□□□□□ -1.7
SPG11-218ENST00000559754 USP49Q70CQ1 688 aa4.41□□□□□ -1.7
SPG11-218ENST00000559754 EDC3Q96F86 508 aaKnown RBP4.41□□□□□ -1.7
SPG11-218ENST00000559754 SIGLEC11Q96RL6 698 aa4.41□□□□□ -1.7
SPG11-218ENST00000559754 CINPQ9BW66 212 aaPredicted RBP4.41□□□□□ -1.7
SPG11-218ENST00000559754 NUP62CLQ9H1M0 184 aa4.41□□□□□ -1.7
SPG11-218ENST00000559754 OBP2AQ9NY56 170 aa4.41□□□□□ -1.7
SPG11-218ENST00000559754 AGPSO00116 658 aa4.4□□□□□ -1.71
SPG11-218ENST00000559754 CLIC1O00299 241 aa4.4□□□□□ -1.71
SPG11-218ENST00000559754 WDHD1O75717 1129 aaPredicted RBP4.4□□□□□ -1.71
SPG11-218ENST00000559754 MT-ND5P03915 603 aa4.4□□□□□ -1.71
SPG11-218ENST00000559754 CENPBP07199 599 aaPredicted RBP4.4□□□□□ -1.71
SPG11-218ENST00000559754 TACR3P29371 465 aa4.4□□□□□ -1.71
SPG11-218ENST00000559754 MCM5P33992 734 aa4.4□□□□□ -1.71
SPG11-218ENST00000559754 RPS13P62277 151 aaKnown RBP4.4□□□□□ -1.71
SPG11-218ENST00000559754 HSF1Q00613 529 aa4.4□□□□□ -1.71
SPG11-218ENST00000559754 SEMA5AQ13591 1074 aa4.4□□□□□ -1.71
SPG11-218ENST00000559754 GRM3Q14832 879 aa4.4□□□□□ -1.71
SPG11-218ENST00000559754 RBMS2Q15434 407 aaKnown RBP4.4□□□□□ -1.71
SPG11-218ENST00000559754 PFKFB3Q16875 520 aaPredicted RBP4.4□□□□□ -1.71
SPG11-218ENST00000559754 CLEC9AQ6UXN8 241 aa4.4□□□□□ -1.71
SPG11-218ENST00000559754 TECPR1Q7Z6L1 1165 aa4.4□□□□□ -1.71
SPG11-218ENST00000559754 C11orf44Q8N8P7 122 aa4.4□□□□□ -1.71
SPG11-218ENST00000559754 FAM71DQ8N9W8 422 aa4.4□□□□□ -1.71
SPG11-218ENST00000559754 PPM1EQ8WY54 764 aa4.4□□□□□ -1.71
SPG11-218ENST00000559754 SNX22Q96L94 193 aa4.4□□□□□ -1.71
SPG11-218ENST00000559754 FAM227BQ96M60 508 aa4.4□□□□□ -1.71
SPG11-218ENST00000559754 UNKQ9C0B0 810 aaKnown RBP4.4□□□□□ -1.71
SPG11-218ENST00000559754 MTMR4Q9NYA4 1195 aa4.4□□□□□ -1.71
SPG11-218ENST00000559754 VPS51Q9UID3 782 aa4.4□□□□□ -1.71
SPG11-218ENST00000559754 FZD4Q9ULV1 537 aa4.4□□□□□ -1.71
SPG11-218ENST00000559754 HPSEQ9Y251 543 aa4.4□□□□□ -1.71
SPG11-218ENST00000559754 USP12O75317 370 aa4.39□□□□□ -1.71
SPG11-218ENST00000559754 ANXA2P07355 339 aaKnown RBP4.39□□□□□ -1.71
SPG11-218ENST00000559754 IFIT2P09913 472 aaKnown RBP4.39□□□□□ -1.71
SPG11-218ENST00000559754 TMEM225BP0DP42 221 aa4.39□□□□□ -1.71
SPG11-218ENST00000559754 ATF7P17544 494 aaPredicted RBP4.39□□□□□ -1.71
SPG11-218ENST00000559754 RHCEP18577 417 aa4.39□□□□□ -1.71
SPG11-218ENST00000559754 HTR3AP46098 478 aa4.39□□□□□ -1.71
SPG11-218ENST00000559754 RHDQ02161 417 aa4.39□□□□□ -1.71
SPG11-218ENST00000559754 ZNF91Q05481 1191 aa4.39□□□□□ -1.71
SPG11-218ENST00000559754 DEUP1Q05D60 604 aa4.39□□□□□ -1.71
SPG11-218ENST00000559754 CCDC15Q0P6D6 951 aa4.39□□□□□ -1.71
SPG11-218ENST00000559754 KCNAB1Q14722 419 aa4.39□□□□□ -1.71
SPG11-218ENST00000559754 ZNF260Q3ZCT1 412 aa4.39□□□□□ -1.71
SPG11-218ENST00000559754 AWAT1Q58HT5 328 aa4.39□□□□□ -1.71
SPG11-218ENST00000559754 C10orf62Q5T681 223 aaPredicted RBP4.39□□□□□ -1.71
SPG11-218ENST00000559754 MANEALQ5VSG8 457 aa4.39□□□□□ -1.71
SPG11-218ENST00000559754 AWAT2Q6E213 333 aa4.39□□□□□ -1.71
SPG11-218ENST00000559754 RNF44Q7L0R7 432 aa4.39□□□□□ -1.71
SPG11-218ENST00000559754 BHLHA9Q7RTU4 235 aa4.39□□□□□ -1.71
SPG11-218ENST00000559754 SKAP1Q86WV1 359 aa4.39□□□□□ -1.71
SPG11-218ENST00000559754 FSTL5Q8N475 847 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms