RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 ATP6V1DQ9Y5K8 247 aa21.59■■□□□ 1.05
TSPAN3-206ENST00000559373 ATXN2Q99700 1313 aaKnown RBP21.58■■□□□ 1.05
TSPAN3-206ENST00000559373 LNP1A1A4G5 178 aa21.58■■□□□ 1.05
TSPAN3-206ENST00000559373 TRIM21P19474 475 aaKnown RBP21.58■■□□□ 1.05
TSPAN3-206ENST00000559373 MXI1P50539 228 aa21.58■■□□□ 1.05
TSPAN3-206ENST00000559373 KIF11P52732 1056 aa21.58■■□□□ 1.05
TSPAN3-206ENST00000559373 PMS1P54277 932 aaKnown RBP21.58■■□□□ 1.05
TSPAN3-206ENST00000559373 DCAF17Q5H9S7 520 aaPredicted RBP21.58■■□□□ 1.05
TSPAN3-206ENST00000559373 TCERG1LQ5VWI1 586 aa21.58■■□□□ 1.05
TSPAN3-206ENST00000559373 ISM2Q6H9L7 571 aa21.58■■□□□ 1.05
TSPAN3-206ENST00000559373 CYP2U1Q7Z449 544 aa21.58■■□□□ 1.05
TSPAN3-206ENST00000559373 SLC4A11Q8NBS3 891 aa21.58■■□□□ 1.05
TSPAN3-206ENST00000559373 OLIG1Q8TAK6 271 aa21.58■■□□□ 1.05
TSPAN3-206ENST00000559373 NDRG1Q92597 394 aaKnown RBP21.58■■□□□ 1.05
TSPAN3-206ENST00000559373 CISHQ9NSE2 258 aa21.58■■□□□ 1.05
TSPAN3-206ENST00000559373 RAB20Q9NX57 234 aa21.58■■□□□ 1.05
TSPAN3-206ENST00000559373 RASAL2Q9UJF2 1139 aa21.58■■□□□ 1.05
TSPAN3-206ENST00000559373 DNMT3LQ9UJW3 386 aa21.58■■□□□ 1.05
TSPAN3-206ENST00000559373 LSM7Q9UK45 103 aaKnown RBP21.58■■□□□ 1.05
TSPAN3-206ENST00000559373 PCDHA5Q9Y5H7 936 aa21.58■■□□□ 1.05
TSPAN3-206ENST00000559373 EPG5Q9HCE0 2579 aa21.58■■□□□ 1.04
TSPAN3-206ENST00000559373 PCNX2A6NKB5 2137 aa21.58■■□□□ 1.04
TSPAN3-206ENST00000559373 TRIM49BA6NDI0 452 aa21.57■■□□□ 1.04
TSPAN3-206ENST00000559373 PRRT4C9JH25 899 aa21.57■■□□□ 1.04
TSPAN3-206ENST00000559373 EPB41P11171 864 aaKnown RBP21.57■■□□□ 1.04
TSPAN3-206ENST00000559373 P2RY2P41231 377 aa21.57■■□□□ 1.04
TSPAN3-206ENST00000559373 PTGER3P43115 390 aa21.57■■□□□ 1.04
TSPAN3-206ENST00000559373 RAD23BP54727 409 aa21.57■■□□□ 1.04
TSPAN3-206ENST00000559373 IRX4P78413 519 aa21.57■■□□□ 1.04
TSPAN3-206ENST00000559373 CBWD6Q4V339 395 aa21.57■■□□□ 1.04
TSPAN3-206ENST00000559373 CBWD3Q5JTY5 395 aa21.57■■□□□ 1.04
TSPAN3-206ENST00000559373 CBWD5Q5RIA9 395 aa21.57■■□□□ 1.04
TSPAN3-206ENST00000559373 GRAMD4Q6IC98 578 aa21.57■■□□□ 1.04
TSPAN3-206ENST00000559373 FMR1NBQ8N0W7 255 aaPredicted RBP21.57■■□□□ 1.04
TSPAN3-206ENST00000559373 FBXL13Q8NEE6 735 aa21.57■■□□□ 1.04
TSPAN3-206ENST00000559373 SLC6A17Q9H1V8 727 aa21.57■■□□□ 1.04
TSPAN3-206ENST00000559373 RAD54BQ9Y620 910 aa21.57■■□□□ 1.04
TSPAN3-206ENST00000559373 TULP2O00295 520 aa21.56■■□□□ 1.04
TSPAN3-206ENST00000559373 GIPC1O14908 333 aa21.56■■□□□ 1.04
TSPAN3-206ENST00000559373 CETN3O15182 167 aa21.56■■□□□ 1.04
TSPAN3-206ENST00000559373 STC2O76061 302 aa21.56■■□□□ 1.04
TSPAN3-206ENST00000559373 HOXB2P14652 356 aa21.56■■□□□ 1.04
TSPAN3-206ENST00000559373 GABRG2P18507 467 aa21.56■■□□□ 1.04
TSPAN3-206ENST00000559373 PLA2G4AP47712 749 aa21.56■■□□□ 1.04
TSPAN3-206ENST00000559373 EFEMP1Q12805 493 aa21.56■■□□□ 1.04
TSPAN3-206ENST00000559373 LRMPQ12912 555 aa21.56■■□□□ 1.04
TSPAN3-206ENST00000559373 EDRF1Q3B7T1 1238 aa21.56■■□□□ 1.04
TSPAN3-206ENST00000559373 MAP7D1Q3KQU3 841 aa21.56■■□□□ 1.04
TSPAN3-206ENST00000559373 ANKRD40Q6AI12 368 aa21.56■■□□□ 1.04
TSPAN3-206ENST00000559373 TMEM176AQ96HP8 235 aa21.56■■□□□ 1.04
TSPAN3-206ENST00000559373 FSCN3Q9NQT6 498 aa21.56■■□□□ 1.04
TSPAN3-206ENST00000559373 TMEM74BQ9NUR3 256 aa21.56■■□□□ 1.04
TSPAN3-206ENST00000559373 KMT2BQ9UMN6 2715 aaPredicted RBP21.55■■□□□ 1.04
TSPAN3-206ENST00000559373 FRYQ5TBA9 3013 aa21.55■■□□□ 1.04
TSPAN3-206ENST00000559373 WASH3PC4AMC7 463 aa21.55■■□□□ 1.04
TSPAN3-206ENST00000559373 KHNYNO15037 678 aaKnown RBP21.55■■□□□ 1.04
TSPAN3-206ENST00000559373 KLKB1P03952 638 aa21.55■■□□□ 1.04
TSPAN3-206ENST00000559373 GOLGA8FQ08AF8 430 aa21.55■■□□□ 1.04
TSPAN3-206ENST00000559373 GOLGA8DPQ0D2H9 430 aa21.55■■□□□ 1.04
TSPAN3-206ENST00000559373 PSAPL1Q6NUJ1 521 aa21.55■■□□□ 1.04
TSPAN3-206ENST00000559373 KIAA1211LQ6NV74 962 aa21.55■■□□□ 1.04
TSPAN3-206ENST00000559373 SPACA7Q96KW9 195 aa21.55■■□□□ 1.04
TSPAN3-206ENST00000559373 XPO6Q96QU8 1125 aaKnown RBP21.55■■□□□ 1.04
TSPAN3-206ENST00000559373 LSM14BQ9BX40 385 aaKnown RBP21.55■■□□□ 1.04
TSPAN3-206ENST00000559373 CD93Q9NPY3 652 aa21.55■■□□□ 1.04
TSPAN3-206ENST00000559373 NUMA1Q14980 2115 aa21.55■■□□□ 1.04
TSPAN3-206ENST00000559373 CKAP5Q14008 2032 aa21.55■■□□□ 1.04
TSPAN3-206ENST00000559373 CACNG3O60359 315 aa21.54■■□□□ 1.04
TSPAN3-206ENST00000559373 KCNK5O95279 499 aa21.54■■□□□ 1.04
TSPAN3-206ENST00000559373 NTSR1P30989 418 aa21.54■■□□□ 1.04
TSPAN3-206ENST00000559373 GTF2H1P32780 548 aa21.54■■□□□ 1.04
TSPAN3-206ENST00000559373 HSF5Q4G112 596 aaPredicted RBP21.54■■□□□ 1.04
TSPAN3-206ENST00000559373 Q6ZNB5 142 aa21.54■■□□□ 1.04
TSPAN3-206ENST00000559373 LPCAT2Q7L5N7 544 aa21.54■■□□□ 1.04
TSPAN3-206ENST00000559373 CCDC186Q7Z3E2 898 aa21.54■■□□□ 1.04
TSPAN3-206ENST00000559373 PIGZQ86VD9 579 aa21.54■■□□□ 1.04
TSPAN3-206ENST00000559373 CHPFQ8IZ52 775 aa21.54■■□□□ 1.04
TSPAN3-206ENST00000559373 DDX1Q92499 740 aaKnown RBP21.54■■□□□ 1.04
TSPAN3-206ENST00000559373 PNPLA8Q9NP80 782 aa21.54■■□□□ 1.04
TSPAN3-206ENST00000559373 CACNA2D2Q9NY47 1150 aa21.54■■□□□ 1.04
TSPAN3-206ENST00000559373 CALCOCO1Q9P1Z2 691 aa21.54■■□□□ 1.04
TSPAN3-206ENST00000559373 USP3Q9Y6I4 520 aa21.54■■□□□ 1.04
TSPAN3-206ENST00000559373 A0A1W2PQF6 199 aa21.53■■□□□ 1.04
TSPAN3-206ENST00000559373 KRT37O76014 449 aa21.53■■□□□ 1.04
TSPAN3-206ENST00000559373 CISD3P0C7P0 127 aa21.53■■□□□ 1.04
TSPAN3-206ENST00000559373 RALAP11233 206 aa21.53■■□□□ 1.04
TSPAN3-206ENST00000559373 DGKGP49619 791 aa21.53■■□□□ 1.04
TSPAN3-206ENST00000559373 GOLGA7BQ2TAP0 167 aa21.53■■□□□ 1.04
TSPAN3-206ENST00000559373 UAP1L1Q3KQV9 507 aa21.53■■□□□ 1.04
TSPAN3-206ENST00000559373 ZNF658Q5TYW1 1059 aaPredicted RBP21.53■■□□□ 1.04
TSPAN3-206ENST00000559373 NUDT18Q6ZVK8 323 aa21.53■■□□□ 1.04
TSPAN3-206ENST00000559373 C11orf74Q86VG3 221 aa21.53■■□□□ 1.04
TSPAN3-206ENST00000559373 DUSP9Q99956 384 aaKnown RBP21.53■■□□□ 1.04
TSPAN3-206ENST00000559373 WDR35Q9P2L0 1181 aa21.53■■□□□ 1.04
TSPAN3-206ENST00000559373 GOLGA6L4A6NEF3 574 aa21.52■■□□□ 1.04
TSPAN3-206ENST00000559373 CDX4O14627 284 aaPredicted RBP21.52■■□□□ 1.04
TSPAN3-206ENST00000559373 ITPKAP23677 461 aa21.52■■□□□ 1.04
TSPAN3-206ENST00000559373 CORO1AP31146 461 aaKnown RBP21.52■■□□□ 1.04
TSPAN3-206ENST00000559373 TKTL1P51854 596 aa21.52■■□□□ 1.04
TSPAN3-206ENST00000559373 ENPEPQ07075 957 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms