RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 CYLC1P35663 651 aaPredicted RBP13□□□□□ -0.33
GABPB1-208ENST00000558970 PPP3CCP48454 512 aa13□□□□□ -0.33
GABPB1-208ENST00000558970 PSEN1P49768 467 aa13□□□□□ -0.33
GABPB1-208ENST00000558970 GALCP54803 685 aa13□□□□□ -0.33
GABPB1-208ENST00000558970 YWHAZP63104 245 aaKnown RBP13□□□□□ -0.33
GABPB1-208ENST00000558970 PITX1P78337 314 aaPredicted RBP13□□□□□ -0.33
GABPB1-208ENST00000558970 CDK17Q00537 523 aa13□□□□□ -0.33
GABPB1-208ENST00000558970 CDO1Q16878 200 aa13□□□□□ -0.33
GABPB1-208ENST00000558970 DCAF6Q58WW2 860 aa13□□□□□ -0.33
GABPB1-208ENST00000558970 EFHC1Q5JVL4 640 aa13□□□□□ -0.33
GABPB1-208ENST00000558970 PARM1Q6UWI2 310 aa13□□□□□ -0.33
GABPB1-208ENST00000558970 TMTC1Q8IUR5 882 aa13□□□□□ -0.33
GABPB1-208ENST00000558970 ACRBPQ8NEB7 543 aa13□□□□□ -0.33
GABPB1-208ENST00000558970 FGF14Q92915 247 aa13□□□□□ -0.33
GABPB1-208ENST00000558970 ARHGEF26Q96DR7 871 aa13□□□□□ -0.33
GABPB1-208ENST00000558970 DESI2Q9BSY9 194 aa13□□□□□ -0.33
GABPB1-208ENST00000558970 ISCUQ9H1K1 167 aa13□□□□□ -0.33
GABPB1-208ENST00000558970 POPDC2Q9HBU9 364 aa13□□□□□ -0.33
GABPB1-208ENST00000558970 GKN1Q9NS71 199 aa13□□□□□ -0.33
GABPB1-208ENST00000558970 LIMD1Q9UGP4 676 aa13□□□□□ -0.33
GABPB1-208ENST00000558970 SLC12A8A0AV02 714 aa12.99□□□□□ -0.33
GABPB1-208ENST00000558970 DPYSL4O14531 572 aa12.99□□□□□ -0.33
GABPB1-208ENST00000558970 DAB1O75553 588 aa12.99□□□□□ -0.33
GABPB1-208ENST00000558970 ASGR2P07307 311 aa12.99□□□□□ -0.33
GABPB1-208ENST00000558970 KRT3P12035 628 aa12.99□□□□□ -0.33
GABPB1-208ENST00000558970 TFE3P19532 575 aaPredicted RBP12.99□□□□□ -0.33
GABPB1-208ENST00000558970 DDX6P26196 483 aaKnown RBP eCLIP12.99□□□□□ -0.336e-6■■■■□ 19.3
GABPB1-208ENST00000558970 ATP5C1P36542 298 aaKnown RBP12.99□□□□□ -0.33
GABPB1-208ENST00000558970 FLT3P36888 993 aa12.99□□□□□ -0.33
GABPB1-208ENST00000558970 SULT1E1P49888 294 aa12.99□□□□□ -0.33
GABPB1-208ENST00000558970 RPL7AP62424 266 aaKnown RBP12.99□□□□□ -0.33
GABPB1-208ENST00000558970 ATP11AP98196 1134 aa12.99□□□□□ -0.33
GABPB1-208ENST00000558970 GRM2Q14416 872 aa12.99□□□□□ -0.33
GABPB1-208ENST00000558970 ZNF268Q14587 947 aaPredicted RBP12.99□□□□□ -0.33
GABPB1-208ENST00000558970 SPA17Q15506 151 aa12.99□□□□□ -0.33
GABPB1-208ENST00000558970 SNX30Q5VWJ9 437 aa12.99□□□□□ -0.33
GABPB1-208ENST00000558970 TANGO2Q6ICL3 276 aa12.99□□□□□ -0.33
GABPB1-208ENST00000558970 TRNP1Q6NT89 227 aa12.99□□□□□ -0.33
GABPB1-208ENST00000558970 DCUN1D2Q6PH85 259 aa12.99□□□□□ -0.33
GABPB1-208ENST00000558970 SLC26A9Q7LBE3 791 aa12.99□□□□□ -0.33
GABPB1-208ENST00000558970 ZDHHC17Q8IUH5 632 aa12.99□□□□□ -0.33
GABPB1-208ENST00000558970 SCML4Q8N228 414 aa12.99□□□□□ -0.33
GABPB1-208ENST00000558970 C3orf20Q8ND61 904 aa12.99□□□□□ -0.33
GABPB1-208ENST00000558970 SMARCD2Q92925 531 aa12.99□□□□□ -0.33
GABPB1-208ENST00000558970 USP13Q92995 863 aaPredicted RBP12.99□□□□□ -0.33
GABPB1-208ENST00000558970 RSPRY1Q96DX4 576 aa12.99□□□□□ -0.33
GABPB1-208ENST00000558970 CFAP57Q96MR6 1250 aa12.99□□□□□ -0.33
GABPB1-208ENST00000558970 ZNF830Q96NB3 372 aaPredicted RBP12.99□□□□□ -0.33
GABPB1-208ENST00000558970 ASB16Q96NS5 453 aa12.99□□□□□ -0.33
GABPB1-208ENST00000558970 NECAB3Q96P71 396 aaPredicted RBP12.99□□□□□ -0.33
GABPB1-208ENST00000558970 FAM204AQ9H8W3 233 aa12.99□□□□□ -0.33
GABPB1-208ENST00000558970 CLIC5Q9NZA1 410 aa12.99□□□□□ -0.33
GABPB1-208ENST00000558970 GDE1Q9NZC3 331 aa12.99□□□□□ -0.33
GABPB1-208ENST00000558970 MARCH2Q9P0N8 246 aa12.99□□□□□ -0.33
GABPB1-208ENST00000558970 NUMBLQ9Y6R0 609 aa12.99□□□□□ -0.33
GABPB1-208ENST00000558970 MIA3Q5JRA6 1907 aa12.98□□□□□ -0.33
GABPB1-208ENST00000558970 NDUFA10O95299 355 aa12.98□□□□□ -0.33
GABPB1-208ENST00000558970 IPO7O95373 1038 aaKnown RBP12.98□□□□□ -0.33
GABPB1-208ENST00000558970 H2AFZP0C0S5 128 aa12.98□□□□□ -0.33
GABPB1-208ENST00000558970 MAGEA1P43355 309 aa12.98□□□□□ -0.33
GABPB1-208ENST00000558970 ZXDBP98169 803 aa12.98□□□□□ -0.33
GABPB1-208ENST00000558970 NME3Q13232 169 aa12.98□□□□□ -0.33
GABPB1-208ENST00000558970 C15orf59Q2T9L4 293 aaPredicted RBP12.98□□□□□ -0.33
GABPB1-208ENST00000558970 PPP1R2P3Q6NXS1 205 aa12.98□□□□□ -0.33
GABPB1-208ENST00000558970 H2AFVQ71UI9 128 aa12.98□□□□□ -0.33
GABPB1-208ENST00000558970 TADA2BQ86TJ2 420 aa12.98□□□□□ -0.33
GABPB1-208ENST00000558970 TAC4Q86UU9 113 aa12.98□□□□□ -0.33
GABPB1-208ENST00000558970 LRRC8AQ8IWT6 810 aa12.98□□□□□ -0.33
GABPB1-208ENST00000558970 CCDC170Q8IYT3 715 aa12.98□□□□□ -0.33
GABPB1-208ENST00000558970 RIN3Q8TB24 985 aa12.98□□□□□ -0.33
GABPB1-208ENST00000558970 DQX1Q8TE96 717 aaKnown RBP12.98□□□□□ -0.33
GABPB1-208ENST00000558970 SH3RF2Q8TEC5 729 aa12.98□□□□□ -0.33
GABPB1-208ENST00000558970 CTNNBL1Q8WYA6 563 aaPredicted RBP12.98□□□□□ -0.33
GABPB1-208ENST00000558970 KHSRPQ92945 711 aaKnown RBP eCLIP12.98□□□□□ -0.332e-9■□□□□ 9.6
GABPB1-208ENST00000558970 WBP2Q969T9 261 aa12.98□□□□□ -0.33
GABPB1-208ENST00000558970 TRIM11Q96F44 468 aa12.98□□□□□ -0.33
GABPB1-208ENST00000558970 RPP25Q9BUL9 199 aaKnown RBP12.98□□□□□ -0.33
GABPB1-208ENST00000558970 PLA2G2FQ9BZM2 168 aa12.98□□□□□ -0.33
GABPB1-208ENST00000558970 TRIM7Q9C029 511 aa12.98□□□□□ -0.33
GABPB1-208ENST00000558970 TDP1Q9NUW8 608 aa12.98□□□□□ -0.33
GABPB1-208ENST00000558970 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.98□□□□□ -0.33
GABPB1-208ENST00000558970 CFAP97Q9P2B7 532 aa12.98□□□□□ -0.33
GABPB1-208ENST00000558970 WDR35Q9P2L0 1181 aa12.98□□□□□ -0.33
GABPB1-208ENST00000558970 DNMT3LQ9UJW3 386 aa12.98□□□□□ -0.33
GABPB1-208ENST00000558970 NENFQ9UMX5 172 aa12.98□□□□□ -0.33
GABPB1-208ENST00000558970 EPN1Q9Y6I3 576 aaPredicted RBP12.98□□□□□ -0.33
GABPB1-208ENST00000558970 MYO10Q9HD67 2058 aa12.98□□□□□ -0.33
GABPB1-208ENST00000558970 ANKRD62A6NC57 917 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 HEPACAM2A8MVW5 462 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 M0QYT0 321 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 LEFTY2O00292 366 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 TRUB2O95900 331 aaKnown RBP12.97□□□□□ -0.33
GABPB1-208ENST00000558970 PDGFRAP16234 1089 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 FECHP22830 423 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 FCARP24071 287 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 RFC1P35251 1148 aaPredicted RBP12.97□□□□□ -0.33
GABPB1-208ENST00000558970 TUBP50607 506 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 GPC5P78333 572 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 ZP2Q05996 745 aa12.97□□□□□ -0.33
GABPB1-208ENST00000558970 CCDC173Q0VFZ6 552 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms