RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 RBL1P28749 1068 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 YWHAGP61981 247 aaKnown RBP eCLIP11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 GBE1Q04446 702 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 IRF5Q13568 498 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 DPYSL3Q14195 570 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 TMCO2Q7Z6W1 182 aaPredicted RBP11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 PALM2Q8IXS6 379 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 TTC13Q8NBP0 860 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 ZNF784Q8NCA9 323 aaPredicted RBP11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 PCDH18Q9HCL0 1135 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 TPX2Q9ULW0 747 aaKnown RBP11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 XPO1O14980 1071 aaKnown RBP11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 GBP1P32455 592 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 IFI35P80217 286 aaPredicted RBP11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 PPP2R5DQ14738 602 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 LRRC14Q15048 493 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 UPP1Q16831 310 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 DDR2Q16832 855 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 NOMO2Q5JPE7 1267 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 ERMARDQ5T6L9 678 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 ARHGAP17Q68EM7 881 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 SLC24A5Q71RS6 500 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 POLNQ7Z5Q5 900 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 CTAGE3PQ8IX95 158 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 FNIP1Q8TF40 1166 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 CHMP2BQ9UQN3 213 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 EXOC1LA0A1B0GW35 172 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 TBKBP1A7MCY6 615 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 HGSO14964 777 aaPredicted RBP11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 RIPK2O43353 540 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 NEBLO76041 1014 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 DDHD2O94830 711 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 KRT15P19012 456 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 WARSP23381 471 aaKnown RBP11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 MRPS5P82675 430 aaKnown RBP11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 GRIK3Q13003 919 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 DEPDC1BQ8WUY9 529 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 ART4Q93070 314 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 CFAP36Q96G28 342 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 AGAP3Q96P47 875 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 HNRNPABQ99729 332 aaKnown RBP11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 SMOQ99835 787 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 XPO7Q9UIA9 1087 aaKnown RBP11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 SLC27A5Q9Y2P5 690 aa11.24□□□□□ -0.61
CSPG4P5-201ENST00000558731 LRPAP1P30533 357 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 CYP2C18P33260 490 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 MAGEA4P43358 317 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 MBTPS1Q14703 1052 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 MGAT5BQ3V5L5 792 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 ANKRD20A8PQ5CZ79 823 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 EFHC2Q5JST6 749 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 KIAA1841Q6NSI8 718 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 BBS12Q6ZW61 710 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 ALLCQ8N6M5 410 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 ATAD1Q8NBU5 361 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 SLAIN1Q8ND83 568 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 PYROXD1Q8WU10 500 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 SMARCD1Q96GM5 515 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 RNF157Q96PX1 679 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 CCDC77Q9BR77 488 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 TMEM30AQ9NV96 361 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 TMLHEQ9NVH6 421 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 WHRNQ9P202 907 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 MYO18AQ92614 2054 aaKnown RBP11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 MOXD2PA6NHM9 499 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 APOC4-APOC2K7ER74 178 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 APOC2P02655 101 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 GABRB2P47870 512 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 SEC24CP53992 1094 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 COPS2P61201 443 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 MGAT3Q09327 533 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 MYO9BQ13459 2157 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 ANKRD22Q5VYY1 191 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 SRRM1Q8IYB3 904 aaKnown RBP11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 NIPA2Q8N8Q9 360 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 C12orf50Q8NA57 414 aaPredicted RBP11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 OR10T2Q8NGX3 314 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 HHIPL1Q96JK4 782 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 HSFY1Q96LI6 401 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 ARVCFO00192 962 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 PPFIA2O75334 1257 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 RARGP13631 454 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 RPL22P35268 128 aaKnown RBP11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 PCK1P35558 622 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 HIF1AQ16665 826 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 CTXN3Q4LDR2 81 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 BTBD8Q5XKL5 378 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 SLC26A9Q7LBE3 791 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 BBOF1Q8ND07 529 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 PCDH19Q8TAB3 1148 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 RNF139Q8WU17 664 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 RSPH1Q8WYR4 309 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 ETNK2Q9NVF9 386 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 TBC1D13Q9NVG8 400 aa11.23□□□□□ -0.61
CSPG4P5-201ENST00000558731 KCNK1O00180 336 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 MSI1O43347 362 aaKnown RBP11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 B4GALT3O60512 393 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 AVILO75366 819 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 MATKP42679 507 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms