RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 KRT13P13646 458 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 GARTP22102 1010 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 LMO2P25791 158 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 MAGEA11P43364 429 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 POLR2FP61218 127 aaKnown RBP11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 USP46P62068 366 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 COL9A2Q14055 689 aaPredicted RBP11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 CRY1Q16526 586 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 EXOC3L4Q17RC7 722 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 E4F1Q66K89 784 aaPredicted RBP11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 LMBRD2Q68DH5 695 aaPredicted RBP11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 TOGARAM2Q6ZUX3 1019 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 INTS8Q75QN2 995 aaKnown RBP11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 RRAGAQ7L523 313 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 C11orf74Q86VG3 221 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 TTC30AQ86WT1 665 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 CNGA4Q8IV77 575 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 ADGRF2Q8IZF7 708 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 GPD1LQ8N335 351 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 LRRC52Q8N7C0 313 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 NEK11Q8NG66 645 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 OR8K1Q8NGG5 319 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 NUP58Q9BVL2 599 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 SCNM1Q9BWG6 230 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 RNF38Q9H0F5 515 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 PDE11AQ9HCR9 933 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 PLXND1Q9Y4D7 1925 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 DMXL2Q8TDJ6 3036 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 LRRIQ3A6PVS8 624 aaPredicted RBP11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 NFATC1O95644 943 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 CYP17A1P05093 508 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 KRT19P08727 400 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 LHX1P48742 406 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 EMC10Q5UCC4 262 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 RAD9BQ6WBX8 426 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 LIMS2Q7Z4I7 341 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 ADGRG2Q8IZP9 1017 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 TOP6BLQ8N6T0 577 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 PARD3BQ8TEW8 1205 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 BAP1Q92560 729 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 ZNF516Q92618 1163 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 FUBP3Q96I24 572 aaKnown RBP eCLIP11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 FNBP1Q96RU3 617 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 DESI2Q9BSY9 194 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 CRTAC1Q9NQ79 661 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 TMEM74BQ9NUR3 256 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 RBAKQ9NYW8 714 aaPredicted RBP11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 MBD1Q9UIS9 605 aaPredicted RBP11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 AJAP1Q9UKB5 411 aaPredicted RBP11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 ITGA11Q9UKX5 1188 aa11.83□□□□□ -0.52
RABGGTA-204ENST00000558376 ZNF233A6NK53 670 aa11.82□□□□□ -0.52
RABGGTA-204ENST00000558376 LRRC53A6NM62 1247 aa11.82□□□□□ -0.52
RABGGTA-204ENST00000558376 SGK1O00141 431 aa11.82□□□□□ -0.52
RABGGTA-204ENST00000558376 SCAMP3O14828 347 aaKnown RBP11.82□□□□□ -0.52
RABGGTA-204ENST00000558376 STX10O60499 249 aa11.82□□□□□ -0.52
RABGGTA-204ENST00000558376 PLEKP08567 350 aaPredicted RBP11.82□□□□□ -0.52
RABGGTA-204ENST00000558376 BDNFP23560 247 aa11.82□□□□□ -0.52
RABGGTA-204ENST00000558376 PCSK1P29120 753 aa11.82□□□□□ -0.52
RABGGTA-204ENST00000558376 P2RY2P41231 377 aa11.82□□□□□ -0.52
RABGGTA-204ENST00000558376 PSMC1P62191 440 aaKnown RBP11.82□□□□□ -0.52
RABGGTA-204ENST00000558376 MRPS21P82921 87 aaKnown RBP11.82□□□□□ -0.52
RABGGTA-204ENST00000558376 RBP5P82980 135 aa11.82□□□□□ -0.52
RABGGTA-204ENST00000558376 CYP24A1Q07973 514 aa11.82□□□□□ -0.52
RABGGTA-204ENST00000558376 KIAA1211LQ6NV74 962 aa11.82□□□□□ -0.52
RABGGTA-204ENST00000558376 GBP6Q6ZN66 633 aa11.82□□□□□ -0.52
RABGGTA-204ENST00000558376 ALLCQ8N6M5 410 aa11.82□□□□□ -0.52
RABGGTA-204ENST00000558376 CCDC26Q8TAB7 109 aa11.82□□□□□ -0.52
RABGGTA-204ENST00000558376 SPATA18Q8TC71 538 aa11.82□□□□□ -0.52
RABGGTA-204ENST00000558376 KBTBD7Q8WVZ9 684 aa11.82□□□□□ -0.52
RABGGTA-204ENST00000558376 MYLPFQ96A32 169 aa11.82□□□□□ -0.52
RABGGTA-204ENST00000558376 SPATA17Q96L03 361 aa11.82□□□□□ -0.52
RABGGTA-204ENST00000558376 DNAJC7Q99615 494 aa11.82□□□□□ -0.52
RABGGTA-204ENST00000558376 SYT15Q9BQS2 421 aa11.82□□□□□ -0.52
RABGGTA-204ENST00000558376 MTMR12Q9C0I1 747 aa11.82□□□□□ -0.52
RABGGTA-204ENST00000558376 SIX2Q9NPC8 291 aa11.82□□□□□ -0.52
RABGGTA-204ENST00000558376 ZDHHC4Q9NPG8 344 aa11.82□□□□□ -0.52
RABGGTA-204ENST00000558376 EVLQ9UI08 416 aaPredicted RBP11.82□□□□□ -0.52
RABGGTA-204ENST00000558376 ANKRD11Q6UB99 2663 aaPredicted RBP11.81□□□□□ -0.52
RABGGTA-204ENST00000558376 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.81□□□□□ -0.52
RABGGTA-204ENST00000558376 A0A0U1RQJ8 604 aa11.81□□□□□ -0.52
RABGGTA-204ENST00000558376 ZNF840PA6NDX5 716 aa11.81□□□□□ -0.52
RABGGTA-204ENST00000558376 SRRM3A6NNA2 597 aaPredicted RBP11.81□□□□□ -0.52
RABGGTA-204ENST00000558376 ZNF500O60304 480 aaPredicted RBP11.81□□□□□ -0.52
RABGGTA-204ENST00000558376 KLF8O95600 359 aaPredicted RBP11.81□□□□□ -0.52
RABGGTA-204ENST00000558376 PDGFRBP09619 1106 aa11.81□□□□□ -0.52
RABGGTA-204ENST00000558376 PTGER3P43115 390 aa11.81□□□□□ -0.52
RABGGTA-204ENST00000558376 ZBED6P86452 979 aa11.81□□□□□ -0.52
RABGGTA-204ENST00000558376 ARID5AQ03989 594 aa11.81□□□□□ -0.52
RABGGTA-204ENST00000558376 TRIM14Q14142 442 aa11.81□□□□□ -0.52
RABGGTA-204ENST00000558376 DHCR24Q15392 516 aa11.81□□□□□ -0.52
RABGGTA-204ENST00000558376 KLHDC7AQ5VTJ3 777 aa11.81□□□□□ -0.52
RABGGTA-204ENST00000558376 ARMCX6Q7L4S7 300 aa11.81□□□□□ -0.52
RABGGTA-204ENST00000558376 C12orf40Q86WS4 652 aa11.81□□□□□ -0.52
RABGGTA-204ENST00000558376 TMEFF1Q8IYR6 380 aa11.81□□□□□ -0.52
RABGGTA-204ENST00000558376 IL17RCQ8NAC3 791 aa11.81□□□□□ -0.52
RABGGTA-204ENST00000558376 TXNDC5Q8NBS9 432 aaKnown RBP11.81□□□□□ -0.52
RABGGTA-204ENST00000558376 OR5B17Q8NGF7 314 aa11.81□□□□□ -0.52
RABGGTA-204ENST00000558376 LMO3Q8TAP4 145 aa11.81□□□□□ -0.52
RABGGTA-204ENST00000558376 GANQ9H2C0 597 aa11.81□□□□□ -0.52
RABGGTA-204ENST00000558376 TRPM5Q9NZQ8 1165 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms