RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-208ENST00000557702 TCHHQ07283 1943 aa9.99□□□□□ -0.81
PABPN1-208ENST00000557702 ARID1BQ8NFD5 2236 aaPredicted RBP9.99□□□□□ -0.81
PABPN1-208ENST00000557702 H0YCG3 227 aa9.99□□□□□ -0.81
PABPN1-208ENST00000557702 HNRNPDLO14979 420 aaKnown RBP9.99□□□□□ -0.81
PABPN1-208ENST00000557702 COCHO43405 550 aa9.99□□□□□ -0.81
PABPN1-208ENST00000557702 TSPAN3O60637 253 aa9.99□□□□□ -0.81
PABPN1-208ENST00000557702 FSBPO95073 299 aa9.99□□□□□ -0.81
PABPN1-208ENST00000557702 OR52Z1P0C646 297 aa9.99□□□□□ -0.81
PABPN1-208ENST00000557702 ITGB6P18564 788 aa9.99□□□□□ -0.81
PABPN1-208ENST00000557702 BDNFP23560 247 aa9.99□□□□□ -0.81
PABPN1-208ENST00000557702 ACP1P24666 158 aa9.99□□□□□ -0.81
PABPN1-208ENST00000557702 ACSL1P33121 698 aa9.99□□□□□ -0.81
PABPN1-208ENST00000557702 LHX1P48742 406 aa9.99□□□□□ -0.81
PABPN1-208ENST00000557702 BCAT1P54687 386 aa9.99□□□□□ -0.81
PABPN1-208ENST00000557702 INHBCP55103 352 aa9.99□□□□□ -0.81
PABPN1-208ENST00000557702 RACK1P63244 317 aaKnown RBP9.99□□□□□ -0.81
PABPN1-208ENST00000557702 NOP14P78316 857 aaKnown RBP9.99□□□□□ -0.81
PABPN1-208ENST00000557702 GRIN1Q05586 938 aa9.99□□□□□ -0.81
PABPN1-208ENST00000557702 TOB2Q14106 344 aaPredicted RBP9.99□□□□□ -0.81
PABPN1-208ENST00000557702 CCDC142Q17RM4 750 aa9.99□□□□□ -0.81
PABPN1-208ENST00000557702 ARL13BQ3SXY8 428 aa9.99□□□□□ -0.81
PABPN1-208ENST00000557702 LINC00303Q3SY05 128 aa9.99□□□□□ -0.81
PABPN1-208ENST00000557702 FAM171BQ6P995 826 aa9.99□□□□□ -0.81
PABPN1-208ENST00000557702 C1orf186Q6ZWK4 172 aa9.99□□□□□ -0.81
PABPN1-208ENST00000557702 CACUL1Q86Y37 369 aa9.99□□□□□ -0.81
PABPN1-208ENST00000557702 UCMAQ8WVF2 138 aa9.99□□□□□ -0.81
PABPN1-208ENST00000557702 WASF1Q92558 559 aa9.99□□□□□ -0.81
PABPN1-208ENST00000557702 MSTO1Q9BUK6 570 aa9.99□□□□□ -0.81
PABPN1-208ENST00000557702 RUSC1Q9BVN2 902 aa9.99□□□□□ -0.81
PABPN1-208ENST00000557702 TIPINQ9BVW5 301 aa9.99□□□□□ -0.81
PABPN1-208ENST00000557702 POLR1BQ9H9Y6 1135 aa9.99□□□□□ -0.81
PABPN1-208ENST00000557702 L1RE1Q9UN81 338 aa9.99□□□□□ -0.81
PABPN1-208ENST00000557702 SNX14Q9Y5W7 946 aa9.99□□□□□ -0.81
PABPN1-208ENST00000557702 TLN1Q9Y490 2541 aaKnown RBP9.99□□□□□ -0.81
PABPN1-208ENST00000557702 ICE1Q9Y2F5 2266 aa9.99□□□□□ -0.81
PABPN1-208ENST00000557702 CACNA1DQ01668 2161 aa9.98□□□□□ -0.81
PABPN1-208ENST00000557702 A0A0B4J269 797 aa9.98□□□□□ -0.81
PABPN1-208ENST00000557702 E9PMD0 336 aa9.98□□□□□ -0.81
PABPN1-208ENST00000557702 USP12O75317 370 aa9.98□□□□□ -0.81
PABPN1-208ENST00000557702 SEMA4FO95754 770 aa9.98□□□□□ -0.81
PABPN1-208ENST00000557702 CISD3P0C7P0 127 aa9.98□□□□□ -0.81
PABPN1-208ENST00000557702 ARRB1P49407 418 aaPredicted RBP9.98□□□□□ -0.81
PABPN1-208ENST00000557702 FOSBP53539 338 aa9.98□□□□□ -0.81
PABPN1-208ENST00000557702 COPAP53621 1224 aa9.98□□□□□ -0.81
PABPN1-208ENST00000557702 CDH8P55286 799 aa9.98□□□□□ -0.81
PABPN1-208ENST00000557702 ST3GAL1Q11201 340 aa9.98□□□□□ -0.81
PABPN1-208ENST00000557702 E2F5Q15329 346 aa9.98□□□□□ -0.81
PABPN1-208ENST00000557702 SHBQ15464 509 aa9.98□□□□□ -0.81
PABPN1-208ENST00000557702 MAPRE1Q15691 268 aaKnown RBP9.98□□□□□ -0.81
PABPN1-208ENST00000557702 TPGS1Q6ZTW0 290 aa9.98□□□□□ -0.81
PABPN1-208ENST00000557702 FAM26EQ8N5C1 309 aa9.98□□□□□ -0.81
PABPN1-208ENST00000557702 LIN37Q96GY3 246 aaPredicted RBP9.98□□□□□ -0.81
PABPN1-208ENST00000557702 DEPDC7Q96QD5 511 aa9.98□□□□□ -0.81
PABPN1-208ENST00000557702 LARP6Q9BRS8 491 aaKnown RBP9.98□□□□□ -0.81
PABPN1-208ENST00000557702 TRIM9Q9C026 710 aa9.98□□□□□ -0.81
PABPN1-208ENST00000557702 BTBD1Q9H0C5 482 aa9.98□□□□□ -0.81
PABPN1-208ENST00000557702 LRRC4CQ9HCJ2 640 aa9.98□□□□□ -0.81
PABPN1-208ENST00000557702 ASCL3Q9NQ33 180 aa9.98□□□□□ -0.81
PABPN1-208ENST00000557702 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.98□□□□□ -0.811e-10■■■□□ 15
PABPN1-208ENST00000557702 THAP10Q9P2Z0 257 aaPredicted RBP9.98□□□□□ -0.81
PABPN1-208ENST00000557702 ORC3Q9UBD5 711 aaPredicted RBP9.98□□□□□ -0.81
PABPN1-208ENST00000557702 BLACEA4D250 179 aa9.97□□□□□ -0.81
PABPN1-208ENST00000557702 CLEC18AA5D8T8 446 aa9.97□□□□□ -0.81
PABPN1-208ENST00000557702 GABRDO14764 452 aa9.97□□□□□ -0.81
PABPN1-208ENST00000557702 ATP2C2O75185 946 aa9.97□□□□□ -0.81
PABPN1-208ENST00000557702 IRF1P10914 325 aa9.97□□□□□ -0.81
PABPN1-208ENST00000557702 GUCY2CP25092 1073 aa9.97□□□□□ -0.81
PABPN1-208ENST00000557702 EPHA8P29322 1005 aaPredicted RBP9.97□□□□□ -0.81
PABPN1-208ENST00000557702 ACOT2P49753 483 aa9.97□□□□□ -0.81
PABPN1-208ENST00000557702 ASIC1P78348 528 aa9.97□□□□□ -0.81
PABPN1-208ENST00000557702 IFRD2Q12894 506 aaPredicted RBP9.97□□□□□ -0.81
PABPN1-208ENST00000557702 ENPP2Q13822 863 aa9.97□□□□□ -0.81
PABPN1-208ENST00000557702 ZSCAN23Q3MJ62 389 aa9.97□□□□□ -0.81
PABPN1-208ENST00000557702 HECTD3Q5T447 861 aa9.97□□□□□ -0.81
PABPN1-208ENST00000557702 CLEC18BQ6UXF7 455 aa9.97□□□□□ -0.81
PABPN1-208ENST00000557702 OSTM1Q86WC4 334 aa9.97□□□□□ -0.81
PABPN1-208ENST00000557702 ADGRF2Q8IZF7 708 aa9.97□□□□□ -0.81
PABPN1-208ENST00000557702 CLEC18CQ8NCF0 446 aa9.97□□□□□ -0.81
PABPN1-208ENST00000557702 PDZD8Q8NEN9 1154 aa9.97□□□□□ -0.81
PABPN1-208ENST00000557702 MYLPFQ96A32 169 aa9.97□□□□□ -0.81
PABPN1-208ENST00000557702 SEMA3CQ99985 751 aa9.97□□□□□ -0.81
PABPN1-208ENST00000557702 LHX5Q9H2C1 402 aa9.97□□□□□ -0.81
PABPN1-208ENST00000557702 GDF3Q9NR23 364 aa9.97□□□□□ -0.81
PABPN1-208ENST00000557702 MARK1Q9P0L2 795 aa9.97□□□□□ -0.81
PABPN1-208ENST00000557702 PTPRJQ12913 1337 aa9.97□□□□□ -0.81
PABPN1-208ENST00000557702 F8VP50 259 aa9.96□□□□□ -0.82
PABPN1-208ENST00000557702 HCRTO43612 131 aa9.96□□□□□ -0.82
PABPN1-208ENST00000557702 PIGRP01833 764 aa9.96□□□□□ -0.82
PABPN1-208ENST00000557702 EPHX1P07099 455 aa9.96□□□□□ -0.82
PABPN1-208ENST00000557702 ACO1P21399 889 aaKnown RBP9.96□□□□□ -0.82
PABPN1-208ENST00000557702 RBMS1P29558 406 aaKnown RBP9.96□□□□□ -0.82
PABPN1-208ENST00000557702 POLR2BP30876 1174 aaKnown RBP9.96□□□□□ -0.82
PABPN1-208ENST00000557702 AFMP43652 599 aa9.96□□□□□ -0.82
PABPN1-208ENST00000557702 CYP27A1Q02318 531 aa9.96□□□□□ -0.82
PABPN1-208ENST00000557702 RAD51AP2Q09MP3 1159 aa9.96□□□□□ -0.82
PABPN1-208ENST00000557702 BNIP3Q12983 259 aa9.96□□□□□ -0.82
PABPN1-208ENST00000557702 IGF2-ASQ6U949 168 aa9.96□□□□□ -0.82
PABPN1-208ENST00000557702 HTR3DQ70Z44 454 aa9.96□□□□□ -0.82
PABPN1-208ENST00000557702 RUFY3Q7L099 469 aa9.96□□□□□ -0.82
PABPN1-208ENST00000557702 NT5DC4Q86YG4 428 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms