RNA–Protein interactions for RNA: ENST00000557428.1

PCNX1-215, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 541 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-215ENST00000557428 SNX11Q9Y5W9 270 aa8.55□□□□□ -1.04
PCNX1-215ENST00000557428 KCNJ18B7U540 433 aa8.54□□□□□ -1.04
PCNX1-215ENST00000557428 TLX3O43711 291 aaPredicted RBP8.54□□□□□ -1.04
PCNX1-215ENST00000557428 PRPF6O94906 941 aaKnown RBP8.54□□□□□ -1.04
PCNX1-215ENST00000557428 RTN3O95197 1032 aaPredicted RBP8.54□□□□□ -1.04
PCNX1-215ENST00000557428 GCNT3O95395 438 aa8.54□□□□□ -1.04
PCNX1-215ENST00000557428 WARSP23381 471 aaKnown RBP8.54□□□□□ -1.04
PCNX1-215ENST00000557428 ADSSP30520 456 aa8.54□□□□□ -1.04
PCNX1-215ENST00000557428 HNF1BP35680 557 aa8.54□□□□□ -1.04
PCNX1-215ENST00000557428 GRK6P43250 576 aa8.54□□□□□ -1.04
PCNX1-215ENST00000557428 CCT8P50990 548 aa8.54□□□□□ -1.04
PCNX1-215ENST00000557428 TPMTP51580 245 aa8.54□□□□□ -1.04
PCNX1-215ENST00000557428 CCDC173Q0VFZ6 552 aa8.54□□□□□ -1.04
PCNX1-215ENST00000557428 TEAD4Q15561 434 aa8.54□□□□□ -1.04
PCNX1-215ENST00000557428 SMAD1Q15797 465 aaKnown RBP8.54□□□□□ -1.04
PCNX1-215ENST00000557428 KIF19Q2TAC6 998 aa8.54□□□□□ -1.04
PCNX1-215ENST00000557428 INAVAQ3KP66 663 aa8.54□□□□□ -1.04
PCNX1-215ENST00000557428 NUP93Q8N1F7 819 aa8.54□□□□□ -1.04
PCNX1-215ENST00000557428 DNASE2BQ8WZ79 361 aa8.54□□□□□ -1.04
PCNX1-215ENST00000557428 PRCCQ92733 491 aaPredicted RBP8.54□□□□□ -1.04
PCNX1-215ENST00000557428 SIPA1Q96FS4 1042 aa8.54□□□□□ -1.04
PCNX1-215ENST00000557428 ZFRQ96KR1 1074 aaKnown RBP8.54□□□□□ -1.04
PCNX1-215ENST00000557428 C8orf48Q96LL4 319 aa8.54□□□□□ -1.04
PCNX1-215ENST00000557428 CEP295NLQ96MC4 621 aa8.54□□□□□ -1.04
PCNX1-215ENST00000557428 ACCSQ96QU6 501 aa8.54□□□□□ -1.04
PCNX1-215ENST00000557428 FIZ1Q96SL8 496 aa8.54□□□□□ -1.04
PCNX1-215ENST00000557428 MRPL45Q9BRJ2 306 aaKnown RBP8.54□□□□□ -1.04
PCNX1-215ENST00000557428 ELOVL4Q9GZR5 314 aa8.54□□□□□ -1.04
PCNX1-215ENST00000557428 DPEP3Q9H4B8 488 aa8.54□□□□□ -1.04
PCNX1-215ENST00000557428 PLK2Q9NYY3 685 aa8.54□□□□□ -1.04
PCNX1-215ENST00000557428 LSM7Q9UK45 103 aaKnown RBP8.54□□□□□ -1.04
PCNX1-215ENST00000557428 STARD13Q9Y3M8 1113 aa8.54□□□□□ -1.04
PCNX1-215ENST00000557428 PCDHGB2Q9Y5G2 931 aa8.54□□□□□ -1.04
PCNX1-215ENST00000557428 STYXL1Q9Y6J8 313 aa8.54□□□□□ -1.04
PCNX1-215ENST00000557428 STON1Q9Y6Q2 735 aa8.54□□□□□ -1.04
PCNX1-215ENST00000557428 ZNF462Q96JM2 2506 aa8.54□□□□□ -1.04
PCNX1-215ENST00000557428 ATP8B3O60423 1300 aa8.54□□□□□ -1.04
PCNX1-215ENST00000557428 PLXNA2O75051 1894 aa8.53□□□□□ -1.04
PCNX1-215ENST00000557428 CBX4O00257 560 aa8.53□□□□□ -1.04
PCNX1-215ENST00000557428 CACNG3O60359 315 aa8.53□□□□□ -1.04
PCNX1-215ENST00000557428 LDHAP00338 332 aaKnown RBP8.53□□□□□ -1.04
PCNX1-215ENST00000557428 C7P10643 843 aa8.53□□□□□ -1.04
PCNX1-215ENST00000557428 OXTRP30559 389 aa8.53□□□□□ -1.04
PCNX1-215ENST00000557428 GNL1P36915 607 aaPredicted RBP8.53□□□□□ -1.04
PCNX1-215ENST00000557428 AFF3P51826 1226 aaKnown RBP8.53□□□□□ -1.04
PCNX1-215ENST00000557428 CDH8P55286 799 aa8.53□□□□□ -1.04
PCNX1-215ENST00000557428 TNNC1P63316 161 aa8.53□□□□□ -1.04
PCNX1-215ENST00000557428 POU5F1Q01860 360 aaKnown RBP8.53□□□□□ -1.04
PCNX1-215ENST00000557428 GOLGA8FQ08AF8 430 aa8.53□□□□□ -1.04
PCNX1-215ENST00000557428 KCNA1Q09470 495 aa8.53□□□□□ -1.04
PCNX1-215ENST00000557428 GOLGA8DPQ0D2H9 430 aa8.53□□□□□ -1.04
PCNX1-215ENST00000557428 L1TD1Q5T7N2 865 aaKnown RBP8.53□□□□□ -1.04
PCNX1-215ENST00000557428 GPR155Q7Z3F1 870 aa8.53□□□□□ -1.04
PCNX1-215ENST00000557428 KCTD17Q8N5Z5 321 aa8.53□□□□□ -1.04
PCNX1-215ENST00000557428 CADM4Q8NFZ8 388 aa8.53□□□□□ -1.04
PCNX1-215ENST00000557428 OR5B17Q8NGF7 314 aa8.53□□□□□ -1.04
PCNX1-215ENST00000557428 SCAMP5Q8TAC9 235 aa8.53□□□□□ -1.04
PCNX1-215ENST00000557428 LARP4BQ92615 738 aaKnown RBP8.53□□□□□ -1.04
PCNX1-215ENST00000557428 KCNN1Q92952 543 aa8.53□□□□□ -1.04
PCNX1-215ENST00000557428 HVCN1Q96D96 273 aa8.53□□□□□ -1.04
PCNX1-215ENST00000557428 NAF1Q96HR8 494 aaKnown RBP8.53□□□□□ -1.04
PCNX1-215ENST00000557428 LLPHQ9BRT6 129 aaKnown RBP8.53□□□□□ -1.04
PCNX1-215ENST00000557428 CBWD1Q9BRT8 395 aa8.53□□□□□ -1.04
PCNX1-215ENST00000557428 MKRN2Q9H000 416 aaKnown RBP8.53□□□□□ -1.04
PCNX1-215ENST00000557428 CD248Q9HCU0 757 aa8.53□□□□□ -1.04
PCNX1-215ENST00000557428 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.53□□□□□ -1.04
PCNX1-215ENST00000557428 BLOC1S4Q9NUP1 217 aa8.53□□□□□ -1.04
PCNX1-215ENST00000557428 TMEM30AQ9NV96 361 aa8.53□□□□□ -1.04
PCNX1-215ENST00000557428 USP36Q9P275 1121 aaKnown RBP8.53□□□□□ -1.04
PCNX1-215ENST00000557428 WDR35Q9P2L0 1181 aa8.53□□□□□ -1.04
PCNX1-215ENST00000557428 DNMT3LQ9UJW3 386 aa8.53□□□□□ -1.04
PCNX1-215ENST00000557428 LIMCH1Q9UPQ0 1083 aa8.53□□□□□ -1.04
PCNX1-215ENST00000557428 ANKRD6Q9Y2G4 727 aa8.53□□□□□ -1.04
PCNX1-215ENST00000557428 SLCO1B1Q9Y6L6 691 aa8.53□□□□□ -1.04
PCNX1-215ENST00000557428 CFAP46Q8IYW2 2715 aa8.53□□□□□ -1.04
PCNX1-215ENST00000557428 NUMA1Q14980 2115 aa8.53□□□□□ -1.04
PCNX1-215ENST00000557428 NAV2Q8IVL1 2488 aa8.53□□□□□ -1.04
PCNX1-215ENST00000557428 ATMQ13315 3056 aa8.52□□□□□ -1.04
PCNX1-215ENST00000557428 TEX51A0A1B0GUA7 166 aa8.52□□□□□ -1.05
PCNX1-215ENST00000557428 METTL12A8MUP2 240 aa8.52□□□□□ -1.05
PCNX1-215ENST00000557428 A8MXQ7 604 aa8.52□□□□□ -1.05
PCNX1-215ENST00000557428 E9PAM4 449 aa8.52□□□□□ -1.05
PCNX1-215ENST00000557428 H0Y8X5 98 aa8.52□□□□□ -1.05
PCNX1-215ENST00000557428 GFRA2O00451 464 aa8.52□□□□□ -1.05
PCNX1-215ENST00000557428 ENC1O14682 589 aa8.52□□□□□ -1.05
PCNX1-215ENST00000557428 ARHGAP6O43182 974 aa8.52□□□□□ -1.05
PCNX1-215ENST00000557428 TLR5O60602 858 aa8.52□□□□□ -1.05
PCNX1-215ENST00000557428 DKK1O94907 266 aa8.52□□□□□ -1.05
PCNX1-215ENST00000557428 FSBPO95073 299 aa8.52□□□□□ -1.05
PCNX1-215ENST00000557428 PTPN1P18031 435 aaKnown RBP8.52□□□□□ -1.05
PCNX1-215ENST00000557428 IL12RB1P42701 662 aa8.52□□□□□ -1.05
PCNX1-215ENST00000557428 SLC5A3P53794 718 aa8.52□□□□□ -1.05
PCNX1-215ENST00000557428 C21orf59P57076 290 aa8.52□□□□□ -1.05
PCNX1-215ENST00000557428 ARID5AQ03989 594 aa8.52□□□□□ -1.05
PCNX1-215ENST00000557428 DNAJC3Q13217 504 aa8.52□□□□□ -1.05
PCNX1-215ENST00000557428 DSG2Q14126 1118 aa8.52□□□□□ -1.05
PCNX1-215ENST00000557428 RABEP1Q15276 862 aa8.52□□□□□ -1.05
PCNX1-215ENST00000557428 RILPL1Q5EBL4 403 aa8.52□□□□□ -1.05
PCNX1-215ENST00000557428 SMYD5Q6GMV2 418 aa8.52□□□□□ -1.05
PCNX1-215ENST00000557428 SCARA5Q6ZMJ2 495 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms