RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 DPH1Q9BZG8 443 aa13.3□□□□□ -0.28
PSEN1-220ENST00000557037 PCED1AQ9H1Q7 454 aa13.3□□□□□ -0.28
PSEN1-220ENST00000557037 C2CD2Q9Y426 696 aa13.3□□□□□ -0.28
PSEN1-220ENST00000557037 F8VP50 259 aa13.29□□□□□ -0.28
PSEN1-220ENST00000557037 CD27P26842 260 aa13.29□□□□□ -0.28
PSEN1-220ENST00000557037 PCSK1P29120 753 aa13.29□□□□□ -0.28
PSEN1-220ENST00000557037 POLR2BP30876 1174 aaKnown RBP13.29□□□□□ -0.28
PSEN1-220ENST00000557037 COPAP53621 1224 aa13.29□□□□□ -0.28
PSEN1-220ENST00000557037 CYP27A1Q02318 531 aa13.29□□□□□ -0.28
PSEN1-220ENST00000557037 ILKQ13418 452 aa13.29□□□□□ -0.28
PSEN1-220ENST00000557037 SERINC3Q13530 473 aa13.29□□□□□ -0.28
PSEN1-220ENST00000557037 TDRD10Q5VZ19 366 aaKnown RBP13.29□□□□□ -0.28
PSEN1-220ENST00000557037 SLC39A4Q6P5W5 647 aa13.29□□□□□ -0.28
PSEN1-220ENST00000557037 FAM171BQ6P995 826 aa13.29□□□□□ -0.28
PSEN1-220ENST00000557037 VSTM1Q6UX27 236 aa13.29□□□□□ -0.28
PSEN1-220ENST00000557037 RUFY3Q7L099 469 aa13.29□□□□□ -0.28
PSEN1-220ENST00000557037 KCNK18Q7Z418 384 aa13.29□□□□□ -0.28
PSEN1-220ENST00000557037 ADGRF2Q8IZF7 708 aa13.29□□□□□ -0.28
PSEN1-220ENST00000557037 CACTIN-AS1Q8N1I8 211 aa13.29□□□□□ -0.28
PSEN1-220ENST00000557037 TMEM86AQ8N2M4 240 aa13.29□□□□□ -0.28
PSEN1-220ENST00000557037 RFFLQ8WZ73 363 aa13.29□□□□□ -0.28
PSEN1-220ENST00000557037 FAM84AQ96KN4 292 aa13.29□□□□□ -0.28
PSEN1-220ENST00000557037 ACE2Q9BYF1 805 aaPredicted RBP13.29□□□□□ -0.28
PSEN1-220ENST00000557037 ASB7Q9H672 318 aa13.29□□□□□ -0.28
PSEN1-220ENST00000557037 STARD5Q9NSY2 213 aa13.29□□□□□ -0.28
PSEN1-220ENST00000557037 HSPBP1Q9NZL4 362 aa13.29□□□□□ -0.28
PSEN1-220ENST00000557037 SEPT3Q9UH03 358 aa13.29□□□□□ -0.28
PSEN1-220ENST00000557037 AGAP1Q9UPQ3 857 aa13.29□□□□□ -0.28
PSEN1-220ENST00000557037 CACNA1DQ01668 2161 aa13.28□□□□□ -0.28
PSEN1-220ENST00000557037 NPHP3-ACAD11A0A0J9YXS1 232 aa13.28□□□□□ -0.28
PSEN1-220ENST00000557037 SEMA4FO95754 770 aa13.28□□□□□ -0.28
PSEN1-220ENST00000557037 CKMT2P17540 419 aa13.28□□□□□ -0.28
PSEN1-220ENST00000557037 TLE1Q04724 770 aa13.28□□□□□ -0.28
PSEN1-220ENST00000557037 LINC00303Q3SY05 128 aa13.28□□□□□ -0.28
PSEN1-220ENST00000557037 DIEXFQ68CQ4 756 aaKnown RBP13.28□□□□□ -0.28
PSEN1-220ENST00000557037 CCDC81Q6ZN84 652 aa13.28□□□□□ -0.28
PSEN1-220ENST00000557037 SLC6A18Q96N87 628 aa13.28□□□□□ -0.28
PSEN1-220ENST00000557037 SLITRK1Q96PX8 696 aa13.28□□□□□ -0.28
PSEN1-220ENST00000557037 SYT15Q9BQS2 421 aa13.28□□□□□ -0.28
PSEN1-220ENST00000557037 CCSER2Q9H7U1 834 aa13.28□□□□□ -0.28
PSEN1-220ENST00000557037 CRTAC1Q9NQ79 661 aa13.28□□□□□ -0.28
PSEN1-220ENST00000557037 PLK2Q9NYY3 685 aa13.28□□□□□ -0.28
PSEN1-220ENST00000557037 EHD2Q9NZN4 543 aa13.28□□□□□ -0.28
PSEN1-220ENST00000557037 WDR35Q9P2L0 1181 aa13.28□□□□□ -0.28
PSEN1-220ENST00000557037 THAP10Q9P2Z0 257 aaPredicted RBP13.28□□□□□ -0.28
PSEN1-220ENST00000557037 ADAMTS1Q9UHI8 967 aa13.28□□□□□ -0.28
PSEN1-220ENST00000557037 MAN2B2Q9Y2E5 1009 aa13.28□□□□□ -0.28
PSEN1-220ENST00000557037 SNX9Q9Y5X1 595 aa13.28□□□□□ -0.28
PSEN1-220ENST00000557037 MYH10P35580 1976 aa13.28□□□□□ -0.28
PSEN1-220ENST00000557037 PP2D1A8MPX8 630 aa13.27□□□□□ -0.29
PSEN1-220ENST00000557037 TISP43B9A030 160 aa13.27□□□□□ -0.29
PSEN1-220ENST00000557037 VILLO15195 856 aa13.27□□□□□ -0.29
PSEN1-220ENST00000557037 TSPAN3O60637 253 aa13.27□□□□□ -0.29
PSEN1-220ENST00000557037 USP12O75317 370 aa13.27□□□□□ -0.29
PSEN1-220ENST00000557037 CTDNEP1O95476 244 aa13.27□□□□□ -0.29
PSEN1-220ENST00000557037 ITGB3P05106 788 aa13.27□□□□□ -0.29
PSEN1-220ENST00000557037 FDPSP14324 419 aaKnown RBP13.27□□□□□ -0.29
PSEN1-220ENST00000557037 PLCG1P19174 1290 aa13.27□□□□□ -0.29
PSEN1-220ENST00000557037 GUCY2CP25092 1073 aa13.27□□□□□ -0.29
PSEN1-220ENST00000557037 LMO2P25791 158 aa13.27□□□□□ -0.29
PSEN1-220ENST00000557037 PNPLA4P41247 253 aa13.27□□□□□ -0.29
PSEN1-220ENST00000557037 LHX1P48742 406 aa13.27□□□□□ -0.29
PSEN1-220ENST00000557037 NOP14P78316 857 aaKnown RBP13.27□□□□□ -0.29
PSEN1-220ENST00000557037 TFAMQ00059 246 aaKnown RBP13.27□□□□□ -0.29
PSEN1-220ENST00000557037 BNIP3Q12983 259 aa13.27□□□□□ -0.29
PSEN1-220ENST00000557037 HECTD3Q5T447 861 aa13.27□□□□□ -0.29
PSEN1-220ENST00000557037 LSMEM2Q8N112 164 aa13.27□□□□□ -0.29
PSEN1-220ENST00000557037 WASF1Q92558 559 aa13.27□□□□□ -0.29
PSEN1-220ENST00000557037 ORAI3Q9BRQ5 295 aa13.27□□□□□ -0.29
PSEN1-220ENST00000557037 LHX5Q9H2C1 402 aa13.27□□□□□ -0.29
PSEN1-220ENST00000557037 WDR70Q9NW82 654 aa13.27□□□□□ -0.29
PSEN1-220ENST00000557037 CHORDC1Q9UHD1 332 aaPredicted RBP13.27□□□□□ -0.29
PSEN1-220ENST00000557037 KCNG1Q9UIX4 513 aa13.27□□□□□ -0.29
PSEN1-220ENST00000557037 PTPRJQ12913 1337 aa13.27□□□□□ -0.29
PSEN1-220ENST00000557037 ANKRD63C9JTQ0 380 aa13.26□□□□□ -0.29
PSEN1-220ENST00000557037 GABRDO14764 452 aa13.26□□□□□ -0.29
PSEN1-220ENST00000557037 DXOO77932 396 aaKnown RBP13.26□□□□□ -0.29
PSEN1-220ENST00000557037 WNT1P04628 370 aa13.26□□□□□ -0.29
PSEN1-220ENST00000557037 PDGFRBP09619 1106 aa13.26□□□□□ -0.29
PSEN1-220ENST00000557037 PRKCHP24723 683 aa13.26□□□□□ -0.29
PSEN1-220ENST00000557037 EPHA8P29322 1005 aaPredicted RBP13.26□□□□□ -0.29
PSEN1-220ENST00000557037 FBN2P35556 2912 aa13.26□□□□□ -0.29
PSEN1-220ENST00000557037 LSSP48449 732 aa13.26□□□□□ -0.29
PSEN1-220ENST00000557037 CACNA2D1P54289 1103 aa13.26□□□□□ -0.29
PSEN1-220ENST00000557037 BCAT1P54687 386 aa13.26□□□□□ -0.29
PSEN1-220ENST00000557037 NCKAP1LP55160 1127 aa13.26□□□□□ -0.29
PSEN1-220ENST00000557037 CDH8P55286 799 aa13.26□□□□□ -0.29
PSEN1-220ENST00000557037 ERVPABLB-1P60509 514 aa13.26□□□□□ -0.29
PSEN1-220ENST00000557037 CKAP5Q14008 2032 aa13.26□□□□□ -0.29
PSEN1-220ENST00000557037 ZRSR1Q15695 479 aaKnown RBP13.26□□□□□ -0.29
PSEN1-220ENST00000557037 FBXO32Q969P5 355 aa13.26□□□□□ -0.29
PSEN1-220ENST00000557037 CEP295NLQ96MC4 621 aa13.26□□□□□ -0.29
PSEN1-220ENST00000557037 TIPINQ9BVW5 301 aa13.26□□□□□ -0.29
PSEN1-220ENST00000557037 POLR1BQ9H9Y6 1135 aa13.26□□□□□ -0.29
PSEN1-220ENST00000557037 ZSWIM6Q9HCJ5 1215 aa13.26□□□□□ -0.29
PSEN1-220ENST00000557037 ASCL3Q9NQ33 180 aa13.26□□□□□ -0.29
PSEN1-220ENST00000557037 THSD1Q9NS62 852 aa13.26□□□□□ -0.29
PSEN1-220ENST00000557037 FOXD4L1Q9NU39 408 aa13.26□□□□□ -0.29
PSEN1-220ENST00000557037 SSUH2Q9Y2M2 353 aa13.26□□□□□ -0.29
PSEN1-220ENST00000557037 CYP46A1Q9Y6A2 500 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms