RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 IMPG2Q9BZV3 1241 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 DNAI2Q9GZS0 605 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.46□□□□□ -1.38
CPSF2-205ENST00000556622 CCDC134Q9H6E4 229 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 SIX2Q9NPC8 291 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 UBE2TQ9NPD8 197 aaPredicted RBP6.46□□□□□ -1.38
CPSF2-205ENST00000556622 HOMER2Q9NSB8 354 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 PRR13Q9NZ81 148 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 FBXO40Q9UH90 709 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 AMACRQ9UHK6 382 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 ZNF214Q9UL59 606 aaPredicted RBP6.46□□□□□ -1.38
CPSF2-205ENST00000556622 TFR2Q9UP52 801 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 COQ4Q9Y3A0 265 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 RIPK3Q9Y572 518 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 PCDHB2Q9Y5E7 798 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 PCDHA3Q9Y5H8 950 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 ALG6Q9Y672 507 aa6.46□□□□□ -1.38
CPSF2-205ENST00000556622 MYH7BA7E2Y1 1941 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 NPHP3-ACAD11A0A0J9YXS1 232 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 C5orf60A6NFR6 353 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 MYO1FO00160 1098 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 O00370 1275 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 RASGRF2O14827 1237 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 CLIC2O15247 247 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 DAPK3O43293 454 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 HNRNPCL1O60812 293 aaKnown RBP6.45□□□□□ -1.38
CPSF2-205ENST00000556622 HIP1RO75146 1068 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 TCEA3O75764 348 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 SUN1O94901 812 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 CYP1A2P05177 515 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 HOXC6P09630 235 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 TCF3P15923 654 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 TPP2P29144 1249 aaPredicted RBP6.45□□□□□ -1.38
CPSF2-205ENST00000556622 CCND3P30281 292 aaPredicted RBP6.45□□□□□ -1.38
CPSF2-205ENST00000556622 POLR2BP30876 1174 aaKnown RBP6.45□□□□□ -1.38
CPSF2-205ENST00000556622 YWHABP31946 246 aaKnown RBP6.45□□□□□ -1.38
CPSF2-205ENST00000556622 HPDP32754 393 aaPredicted RBP6.45□□□□□ -1.38
CPSF2-205ENST00000556622 RASSF2P50749 326 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 CYP2J2P51589 502 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 GPC3P51654 580 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 YWHAEP62258 255 aaKnown RBP6.45□□□□□ -1.38
CPSF2-205ENST00000556622 PSMC6P62333 389 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 CDR2Q01850 454 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 ACTN3Q08043 901 aaPredicted RBP6.45□□□□□ -1.38
CPSF2-205ENST00000556622 ZNF844Q08AG5 666 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 STRN3Q13033 797 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 PDCLQ13371 301 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 CTTNQ14247 550 aaKnown RBP6.45□□□□□ -1.38
CPSF2-205ENST00000556622 LACTB2Q53H82 288 aaPredicted RBP6.45□□□□□ -1.38
CPSF2-205ENST00000556622 ANKRD39Q53RE8 183 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 TTMPQ5BVD1 217 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 PRAMEF19Q5SWL8 479 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 OLFML2BQ68BL8 750 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 MFSD5Q6N075 450 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 CCDC137Q6PK04 289 aaKnown RBP6.45□□□□□ -1.38
CPSF2-205ENST00000556622 MPZL3Q6UWV2 235 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 HAUS6Q7Z4H7 955 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 PCGF5Q86SE9 256 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 FAM71AQ8IYT1 594 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 ATL2Q8NHH9 583 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 SYTL5Q8TDW5 730 aaPredicted RBP6.45□□□□□ -1.38
CPSF2-205ENST00000556622 DYDC1Q8WWB3 177 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 RIN2Q8WYP3 895 aaPredicted RBP6.45□□□□□ -1.38
CPSF2-205ENST00000556622 DPF3Q92784 378 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 CCDC120Q96HB5 630 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 DHRS1Q96LJ7 313 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 ANKRD27Q96NW4 1050 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 TUBB6Q9BUF5 446 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 AP1M1Q9BXS5 423 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 TRIM7Q9C029 511 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 MIS12Q9H081 205 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 LRRC19Q9H756 370 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 CARS2Q9HA77 564 aaKnown RBP6.45□□□□□ -1.38
CPSF2-205ENST00000556622 UBN1Q9NPG3 1134 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 C1orf112Q9NSG2 853 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 INTS9Q9NV88 658 aaKnown RBP6.45□□□□□ -1.38
CPSF2-205ENST00000556622 C19orf73Q9NVV2 129 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 FLRT1Q9NZU1 646 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 CCPG1Q9ULG6 757 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 PPT2Q9UMR5 302 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 GRIN2DO15399 1336 aa6.45□□□□□ -1.38
CPSF2-205ENST00000556622 RLFQ13129 1914 aa6.44□□□□□ -1.38
CPSF2-205ENST00000556622 WASH4PA8MWX3 477 aa6.44□□□□□ -1.38
CPSF2-205ENST00000556622 H0YGN5 161 aa6.44□□□□□ -1.38
CPSF2-205ENST00000556622 NFIBO00712 420 aa6.44□□□□□ -1.38
CPSF2-205ENST00000556622 TTI1O43156 1089 aa6.44□□□□□ -1.38
CPSF2-205ENST00000556622 PSTPIP1O43586 416 aa6.44□□□□□ -1.38
CPSF2-205ENST00000556622 CHMP2AO43633 222 aa6.44□□□□□ -1.38
CPSF2-205ENST00000556622 CLEC3AO75596 197 aa6.44□□□□□ -1.38
CPSF2-205ENST00000556622 ZNF189O75820 626 aaPredicted RBP6.44□□□□□ -1.38
CPSF2-205ENST00000556622 ACTN1P12814 892 aa6.44□□□□□ -1.38
CPSF2-205ENST00000556622 ATP2A2P16615 1042 aaKnown RBP6.44□□□□□ -1.38
CPSF2-205ENST00000556622 ABCB4P21439 1286 aa6.44□□□□□ -1.38
CPSF2-205ENST00000556622 CCND2P30279 289 aa6.44□□□□□ -1.38
CPSF2-205ENST00000556622 NMT1P30419 496 aaKnown RBP6.44□□□□□ -1.38
CPSF2-205ENST00000556622 ALDH3A1P30838 453 aa6.44□□□□□ -1.38
CPSF2-205ENST00000556622 HOXA13P31271 388 aaPredicted RBP6.44□□□□□ -1.38
CPSF2-205ENST00000556622 GDNFP39905 211 aa6.44□□□□□ -1.38
CPSF2-205ENST00000556622 NSFP46459 744 aaKnown RBP6.44□□□□□ -1.38
CPSF2-205ENST00000556622 DNA2P51530 1060 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms