RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 CHRNA4P43681 627 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 PCP4P48539 62 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 GSK3AP49840 483 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 FXR1P51114 621 aaKnown RBP eCLIP6.43□□□□□ -1.38
TDP1-215ENST00000556498 CCR3P51677 355 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 TGFB2P61812 414 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 ECT2LQ008S8 904 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 TFAP4Q01664 338 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 KRT17Q04695 432 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 RAD51Q06609 339 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 KCNMA1Q12791 1236 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 SERINC3Q13530 473 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 GALNT3Q14435 633 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 NCAPHQ15003 741 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 CNPY1Q3B7I2 92 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 MINDY4Q4G0A6 757 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 HERC4Q5GLZ8 1057 aaPredicted RBP6.43□□□□□ -1.38
TDP1-215ENST00000556498 TMEM201Q5SNT2 666 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 ITPRIPL1Q6GPH6 555 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 ALKBH5Q6P6C2 394 aaKnown RBP6.43□□□□□ -1.38
TDP1-215ENST00000556498 TOGARAM2Q6ZUX3 1019 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 STXBP4Q6ZWJ1 553 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 KRT26Q7Z3Y9 468 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 GPR141Q7Z602 305 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 KIAA0907Q7Z7F0 614 aaPredicted RBP6.43□□□□□ -1.38
TDP1-215ENST00000556498 ASPGQ86U10 573 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 CTAGE6Q86UF2 777 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 CDR2LQ86X02 465 aaPredicted RBP6.43□□□□□ -1.38
TDP1-215ENST00000556498 PALB2Q86YC2 1186 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 RHPN2Q8IUC4 686 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 CTAGE4Q8IX94 777 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 LRRC34Q8IZ02 419 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 ZBED8Q8IZ13 594 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 CBARPQ8N350 705 aaPredicted RBP6.43□□□□□ -1.38
TDP1-215ENST00000556498 ANKRD44Q8N8A2 993 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 ANKS4BQ8N8V4 417 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 TERB1Q8NA31 727 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 PIK3C3Q8NEB9 887 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 ZNF507Q8TCN5 953 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 SSH3Q8TE77 659 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 CPLX3Q8WVH0 158 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 SLC29A1Q99808 456 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 LLPHQ9BRT6 129 aaKnown RBP6.43□□□□□ -1.38
TDP1-215ENST00000556498 WACQ9BTA9 647 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 DSCC1Q9BVC3 393 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 TRIM62Q9BVG3 475 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 PHF20Q9BVI0 1012 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 FTOQ9C0B1 505 aaKnown RBP eCLIP6.43□□□□□ -1.38
TDP1-215ENST00000556498 TTYH3Q9C0H2 523 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 ATP13A3Q9H7F0 1226 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 KAT14Q9H8E8 782 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 KCNK13Q9HB14 408 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 DDX4Q9NQI0 724 aaKnown RBP6.43□□□□□ -1.38
TDP1-215ENST00000556498 GGA3Q9NZ52 723 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 WWOXQ9NZC7 414 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 ZIM2Q9NZV7 527 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 CEP72Q9P209 647 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 HSFX1Q9UBD0 423 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 SRP68Q9UHB9 627 aaKnown RBP6.43□□□□□ -1.38
TDP1-215ENST00000556498 ADAM30Q9UKF2 790 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 ERVK-11Q9UQG0 969 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 FRMPD4Q14CM0 1322 aa6.43□□□□□ -1.38
TDP1-215ENST00000556498 PBRM1Q86U86 1689 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 CARMIL2Q6F5E8 1435 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 SETD1BQ9UPS6 1966 aaKnown RBP6.42□□□□□ -1.38
TDP1-215ENST00000556498 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.42□□□□□ -1.38
TDP1-215ENST00000556498 A0A1B0GVL5 298 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 SLC12A8A0AV02 714 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 FAM221BA6H8Z2 402 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 VWA3AA6NCI4 1184 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 PRR5-ARHGAP8B1AHC4 643 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 C1QTNF9BB2RNN3 333 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 CHURC1-FNTBB4DL54 471 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 H0YCG3 227 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 FOXP2O15409 715 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 MAGEB3O15480 346 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 NOL3O60936 208 aaKnown RBP6.42□□□□□ -1.38
TDP1-215ENST00000556498 JRKO75564 520 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 DNAJB5O75953 348 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 PLEKHA8P1O95397 391 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 FAM107AO95990 144 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 CYP1A1P04798 512 aaPredicted RBP6.42□□□□□ -1.38
TDP1-215ENST00000556498 SSBP05455 408 aaKnown RBP eCLIP6.42□□□□□ -1.38
TDP1-215ENST00000556498 PGRP06401 933 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 ASNSP08243 561 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 PABPC4LP0CB38 370 aaKnown RBP6.42□□□□□ -1.38
TDP1-215ENST00000556498 MYL4P12829 197 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 GFAPP14136 432 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 HDCP19113 662 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 PTX3P26022 381 aaPredicted RBP6.42□□□□□ -1.38
TDP1-215ENST00000556498 GSTM2P28161 218 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 TTKP33981 857 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 GARSP41250 739 aaKnown RBP6.42□□□□□ -1.38
TDP1-215ENST00000556498 MAGEA11P43364 429 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 PTPN9P43378 593 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 ZNF75DP51815 510 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 ATP6V0D1P61421 351 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 GNGT1P63211 74 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 RNF4P78317 190 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 KIF23Q02241 960 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms