RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 GLB1LQ6UWU2 654 aa5.08□□□□□ -1.6
ATXN3-238ENST00000556288 CD300LDQ6UXZ3 194 aa5.08□□□□□ -1.6
ATXN3-238ENST00000556288 ARHGAP36Q6ZRI8 547 aa5.08□□□□□ -1.6
ATXN3-238ENST00000556288 CCDC73Q6ZRK6 1079 aa5.08□□□□□ -1.6
ATXN3-238ENST00000556288 C1orf186Q6ZWK4 172 aa5.08□□□□□ -1.6
ATXN3-238ENST00000556288 APBB1IPQ7Z5R6 666 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-238ENST00000556288 OSTM1Q86WC4 334 aa5.08□□□□□ -1.6
ATXN3-238ENST00000556288 TRIM48Q8IWZ4 208 aa5.08□□□□□ -1.6
ATXN3-238ENST00000556288 THNSL1Q8IYQ7 743 aa5.08□□□□□ -1.6
ATXN3-238ENST00000556288 HACE1Q8IYU2 909 aa5.08□□□□□ -1.6
ATXN3-238ENST00000556288 SYCP3Q8IZU3 236 aa5.08□□□□□ -1.6
ATXN3-238ENST00000556288 LINC00301Q8NCQ3 95 aa5.08□□□□□ -1.6
ATXN3-238ENST00000556288 SLC17A8Q8NDX2 589 aa5.08□□□□□ -1.6
ATXN3-238ENST00000556288 MAFAQ8NHW3 353 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-238ENST00000556288 UHMK1Q8TAS1 419 aaKnown RBP5.08□□□□□ -1.6
ATXN3-238ENST00000556288 PHOSPHO1Q8TCT1 267 aa5.08□□□□□ -1.6
ATXN3-238ENST00000556288 URGCPQ8TCY9 931 aa5.08□□□□□ -1.6
ATXN3-238ENST00000556288 GDPD5Q8WTR4 605 aa5.08□□□□□ -1.6
ATXN3-238ENST00000556288 CPA5Q8WXQ8 436 aa5.08□□□□□ -1.6
ATXN3-238ENST00000556288 LARP4BQ92615 738 aaKnown RBP5.08□□□□□ -1.6
ATXN3-238ENST00000556288 RAD54LQ92698 747 aa5.08□□□□□ -1.6
ATXN3-238ENST00000556288 GUCD1Q96NT3 240 aa5.08□□□□□ -1.6
ATXN3-238ENST00000556288 ADPGKQ9BRR6 497 aa5.08□□□□□ -1.6
ATXN3-238ENST00000556288 EIF2AQ9BY44 585 aaKnown RBP5.08□□□□□ -1.6
ATXN3-238ENST00000556288 C2orf40Q9H1Z8 148 aa5.08□□□□□ -1.6
ATXN3-238ENST00000556288 TRIM39Q9HCM9 518 aa5.08□□□□□ -1.6
ATXN3-238ENST00000556288 TMEM161AQ9NX61 479 aa5.08□□□□□ -1.6
ATXN3-238ENST00000556288 ASH2LQ9UBL3 628 aa5.08□□□□□ -1.6
ATXN3-238ENST00000556288 PCDHA7Q9UN72 937 aa5.08□□□□□ -1.6
ATXN3-238ENST00000556288 TMA7Q9Y2S6 64 aaKnown RBP5.08□□□□□ -1.6
ATXN3-238ENST00000556288 HES2Q9Y543 173 aa5.08□□□□□ -1.6
ATXN3-238ENST00000556288 PLXNA3P51805 1871 aa5.08□□□□□ -1.6
ATXN3-238ENST00000556288 A0A0U1RQF3 1178 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 EPOPA6NHQ4 379 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 K7ENM7 598 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 WNT9AO14904 365 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 NUAK1O60285 661 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 TSPAN1O60635 241 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 ZC3H11AO75152 810 aaKnown RBP eCLIP5.07□□□□□ -1.6
ATXN3-238ENST00000556288 PPP6R2O75170 966 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 YEATS4O95619 227 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 ALDH2P05091 517 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 KRT15P19012 456 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 NMT1P30419 496 aaKnown RBP5.07□□□□□ -1.6
ATXN3-238ENST00000556288 AXLP30530 894 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 HOXA11P31270 313 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-238ENST00000556288 BMPR1AP36894 532 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 PBX3P40426 434 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 STAT5AP42229 794 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 NAMPTP43490 491 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 OR1G1P47890 313 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 NPTX2P47972 431 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 ALDH7A1P49419 539 aaKnown RBP5.07□□□□□ -1.6
ATXN3-238ENST00000556288 RAB27AP51159 221 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 EFNA5P52803 228 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 SLC12A3P55017 1021 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 ERVK-21P61565 698 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 FAM189BP81408 668 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 HTRA4P83105 476 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-238ENST00000556288 AMPD3Q01432 767 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 KRT17Q04695 432 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 MBTD1Q05BQ5 628 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 TUSC3Q13454 348 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 GIT2Q14161 759 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 GPR19Q15760 415 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 CRY1Q16526 586 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 PTPROQ16827 1216 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 TMEM119Q4V9L6 283 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 HERC4Q5GLZ8 1057 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-238ENST00000556288 NOMO2Q5JPE7 1267 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 L1TD1Q5T7N2 865 aaKnown RBP5.07□□□□□ -1.6
ATXN3-238ENST00000556288 ATF7IP2Q5U623 682 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 ATL3Q6DD88 541 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 HAUS6Q7Z4H7 955 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 B3GNT8Q7Z7M8 397 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 RBM23Q86U06 439 aaKnown RBP5.07□□□□□ -1.6
ATXN3-238ENST00000556288 ZC3H18Q86VM9 953 aaKnown RBP5.07□□□□□ -1.6
ATXN3-238ENST00000556288 MIB1Q86YT6 1006 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 TMEFF1Q8IYR6 380 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 CEP57L1Q8IYX8 460 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 FAM26EQ8N5C1 309 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 IQUBQ8NA54 791 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 KCNG4Q8TDN1 519 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 RABGGTAQ92696 567 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 TOE1Q96GM8 510 aaKnown RBP5.07□□□□□ -1.6
ATXN3-238ENST00000556288 ZBTB45Q96K62 511 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-238ENST00000556288 RPS6KC1Q96S38 1066 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 GAD1Q99259 594 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 REEP2Q9BRK0 252 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 TARS2Q9BW92 718 aaKnown RBP5.07□□□□□ -1.6
ATXN3-238ENST00000556288 CCSER1Q9C0I3 900 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 LRRC27Q9C0I9 530 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 TMEM117Q9H0C3 514 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 IRF2BPLQ9H1B7 796 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 BLZF1Q9H2G9 400 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 MRPL44Q9H9J2 332 aaKnown RBP5.07□□□□□ -1.6
ATXN3-238ENST00000556288 BLOC1S4Q9NUP1 217 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 AGPAT5Q9NUQ2 364 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 PANK4Q9NVE7 773 aa5.07□□□□□ -1.6
ATXN3-238ENST00000556288 PRMT7Q9NVM4 692 aaPredicted RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms