RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 RSAD2Q8WXG1 361 aa14.8□□□□□ -0.04
SNX6-206ENST00000556162 NECAB3Q96P71 396 aaPredicted RBP14.8□□□□□ -0.04
SNX6-206ENST00000556162 UHRF1Q96T88 793 aaPredicted RBP14.8□□□□□ -0.04
SNX6-206ENST00000556162 SMPD4Q9NXE4 827 aa14.8□□□□□ -0.04
SNX6-206ENST00000556162 DENND4CQ5VZ89 1909 aa14.8□□□□□ -0.04
SNX6-206ENST00000556162 MDM4O15151 490 aa14.8□□□□□ -0.04
SNX6-206ENST00000556162 GRAP2O75791 330 aa14.8□□□□□ -0.04
SNX6-206ENST00000556162 FYNP06241 537 aa14.8□□□□□ -0.04
SNX6-206ENST00000556162 ASGR2P07307 311 aa14.8□□□□□ -0.04
SNX6-206ENST00000556162 RNASE9P60153 205 aaKnown RBP14.8□□□□□ -0.04
SNX6-206ENST00000556162 SLC18A3Q16572 532 aa14.8□□□□□ -0.04
SNX6-206ENST00000556162 CCDC122Q5T0U0 273 aa14.8□□□□□ -0.04
SNX6-206ENST00000556162 ALKBH5Q6P6C2 394 aaKnown RBP14.8□□□□□ -0.04
SNX6-206ENST00000556162 PHLDB2Q86SQ0 1253 aa14.8□□□□□ -0.04
SNX6-206ENST00000556162 DDX42Q86XP3 938 aaKnown RBP eCLIP14.8□□□□□ -0.04
SNX6-206ENST00000556162 MIB1Q86YT6 1006 aa14.8□□□□□ -0.04
SNX6-206ENST00000556162 MFSD6LQ8IWD5 586 aa14.8□□□□□ -0.04
SNX6-206ENST00000556162 SH3RF2Q8TEC5 729 aa14.8□□□□□ -0.04
SNX6-206ENST00000556162 RPP25Q9BUL9 199 aaKnown RBP14.8□□□□□ -0.04
SNX6-206ENST00000556162 ISCUQ9H1K1 167 aa14.8□□□□□ -0.04
SNX6-206ENST00000556162 MARCH2Q9P0N8 246 aa14.8□□□□□ -0.04
SNX6-206ENST00000556162 RASAL2Q9UJF2 1139 aa14.8□□□□□ -0.04
SNX6-206ENST00000556162 NAALADL1Q9UQQ1 740 aa14.8□□□□□ -0.04
SNX6-206ENST00000556162 MYO16Q9Y6X6 1858 aa14.8□□□□□ -0.04
SNX6-206ENST00000556162 ANAPC1Q9H1A4 1944 aa14.8□□□□□ -0.04
SNX6-206ENST00000556162 OBSL1O75147 1896 aa14.79□□□□□ -0.04
SNX6-206ENST00000556162 LEFTY2O00292 366 aa14.79□□□□□ -0.04
SNX6-206ENST00000556162 PSMC3P17980 439 aa14.79□□□□□ -0.04
SNX6-206ENST00000556162 COG7P83436 770 aa14.79□□□□□ -0.04
SNX6-206ENST00000556162 GFPT1Q06210 699 aaPredicted RBP14.79□□□□□ -0.04
SNX6-206ENST00000556162 ASTE1Q2TB18 679 aaPredicted RBP14.79□□□□□ -0.04
SNX6-206ENST00000556162 DCAF6Q58WW2 860 aa14.79□□□□□ -0.04
SNX6-206ENST00000556162 RNF135Q8IUD6 432 aa14.79□□□□□ -0.04
SNX6-206ENST00000556162 YAF2Q8IY57 180 aa14.79□□□□□ -0.04
SNX6-206ENST00000556162 DEFB106AQ8N104 65 aa14.79□□□□□ -0.04
SNX6-206ENST00000556162 SLC44A3Q8N4M1 653 aa14.79□□□□□ -0.04
SNX6-206ENST00000556162 BPIFB1Q8TDL5 484 aa14.79□□□□□ -0.04
SNX6-206ENST00000556162 DEPDC1BQ8WUY9 529 aa14.79□□□□□ -0.04
SNX6-206ENST00000556162 KHSRPQ92945 711 aaKnown RBP eCLIP14.79□□□□□ -0.048e-9■■■□□ 15.5
SNX6-206ENST00000556162 RSPRY1Q96DX4 576 aa14.79□□□□□ -0.04
SNX6-206ENST00000556162 TRIM11Q96F44 468 aa14.79□□□□□ -0.04
SNX6-206ENST00000556162 PLA2G2FQ9BZM2 168 aa14.79□□□□□ -0.04
SNX6-206ENST00000556162 GKN1Q9NS71 199 aa14.79□□□□□ -0.04
SNX6-206ENST00000556162 THG1LQ9NWX6 298 aaKnown RBP14.79□□□□□ -0.04
SNX6-206ENST00000556162 GSCP56915 257 aaPredicted RBP14.78□□□□□ -0.04
SNX6-206ENST00000556162 GSDMDP57764 484 aa14.78□□□□□ -0.04
SNX6-206ENST00000556162 ZXDBP98169 803 aa14.78□□□□□ -0.04
SNX6-206ENST00000556162 TDGQ13569 410 aa14.78□□□□□ -0.04
SNX6-206ENST00000556162 SYPL2Q5VXT5 272 aa14.78□□□□□ -0.04
SNX6-206ENST00000556162 CC2D1AQ6P1N0 951 aaPredicted RBP14.78□□□□□ -0.04
SNX6-206ENST00000556162 MSANTD2Q6P1R3 559 aa14.78□□□□□ -0.04
SNX6-206ENST00000556162 VITQ6UXI7 678 aa14.78□□□□□ -0.04
SNX6-206ENST00000556162 DNAAF5Q86Y56 855 aa14.78□□□□□ -0.04
SNX6-206ENST00000556162 C3orf20Q8ND61 904 aa14.78□□□□□ -0.04
SNX6-206ENST00000556162 LRRC3BQ96PB8 259 aa14.78□□□□□ -0.04
SNX6-206ENST00000556162 SLC2A13Q96QE2 648 aa14.78□□□□□ -0.04
SNX6-206ENST00000556162 SELENOOQ9BVL4 669 aa14.78□□□□□ -0.04
SNX6-206ENST00000556162 TRMT61BQ9BVS5 477 aaKnown RBP14.78□□□□□ -0.04
SNX6-206ENST00000556162 KLF16Q9BXK1 252 aaPredicted RBP14.78□□□□□ -0.04
SNX6-206ENST00000556162 CD320Q9NPF0 282 aa14.78□□□□□ -0.04
SNX6-206ENST00000556162 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.78□□□□□ -0.04
SNX6-206ENST00000556162 SFMBT1Q9UHJ3 866 aa14.78□□□□□ -0.04
SNX6-206ENST00000556162 SLC12A8A0AV02 714 aa14.78□□□□□ -0.04
SNX6-206ENST00000556162 MYBL1P10243 752 aa14.78□□□□□ -0.04
SNX6-206ENST00000556162 KRT3P12035 628 aa14.78□□□□□ -0.04
SNX6-206ENST00000556162 TCF3P15923 654 aa14.78□□□□□ -0.04
SNX6-206ENST00000556162 RRM1P23921 792 aa14.78□□□□□ -0.04
SNX6-206ENST00000556162 NOS2P35228 1153 aa14.78□□□□□ -0.04
SNX6-206ENST00000556162 MATKP42679 507 aa14.78□□□□□ -0.04
SNX6-206ENST00000556162 KPNA1P52294 538 aaPredicted RBP14.78□□□□□ -0.04
SNX6-206ENST00000556162 DNAJC24Q6P3W2 148 aa14.78□□□□□ -0.04
SNX6-206ENST00000556162 ARCQ7LC44 396 aa14.78□□□□□ -0.04
SNX6-206ENST00000556162 TMTC1Q8IUR5 882 aa14.78□□□□□ -0.04
SNX6-206ENST00000556162 DQX1Q8TE96 717 aaKnown RBP14.78□□□□□ -0.04
SNX6-206ENST00000556162 ZFRQ96KR1 1074 aaKnown RBP14.78□□□□□ -0.04
SNX6-206ENST00000556162 METTL5Q9NRN9 209 aaKnown RBP14.78□□□□□ -0.04
SNX6-206ENST00000556162 PARVAQ9NVD7 372 aa14.78□□□□□ -0.04
SNX6-206ENST00000556162 CFAP97Q9P2B7 532 aa14.78□□□□□ -0.04
SNX6-206ENST00000556162 TMEM59LQ9UK28 342 aa14.78□□□□□ -0.04
SNX6-206ENST00000556162 SH3BP1Q9Y3L3 701 aa14.78□□□□□ -0.04
SNX6-206ENST00000556162 SIGLEC16A6NMB1 481 aa14.77□□□□□ -0.05
SNX6-206ENST00000556162 DAB1O75553 588 aa14.77□□□□□ -0.05
SNX6-206ENST00000556162 IRF1P10914 325 aa14.77□□□□□ -0.05
SNX6-206ENST00000556162 FCHO2Q0JRZ9 810 aa14.77□□□□□ -0.05
SNX6-206ENST00000556162 GRM2Q14416 872 aa14.77□□□□□ -0.05
SNX6-206ENST00000556162 MTF1Q14872 753 aa14.77□□□□□ -0.05
SNX6-206ENST00000556162 ZNF77Q15935 545 aa14.77□□□□□ -0.05
SNX6-206ENST00000556162 CCDC170Q8IYT3 715 aa14.77□□□□□ -0.05
SNX6-206ENST00000556162 ZNF653Q96CK0 615 aa14.77□□□□□ -0.05
SNX6-206ENST00000556162 SERPINB11Q96P15 392 aa14.77□□□□□ -0.05
SNX6-206ENST00000556162 SMOC2Q9H3U7 446 aa14.77□□□□□ -0.05
SNX6-206ENST00000556162 RRN3Q9NYV6 651 aa14.77□□□□□ -0.05
SNX6-206ENST00000556162 CNOT8Q9UFF9 292 aaKnown RBP14.77□□□□□ -0.05
SNX6-206ENST00000556162 STAP1Q9ULZ2 295 aa14.77□□□□□ -0.05
SNX6-206ENST00000556162 SORCS3Q9UPU3 1222 aa14.77□□□□□ -0.05
SNX6-206ENST00000556162 HBS1LQ9Y450 684 aaKnown RBP14.77□□□□□ -0.05
SNX6-206ENST00000556162 E2F8A0AVK6 867 aa14.76□□□□□ -0.05
SNX6-206ENST00000556162 ANKRD62A6NC57 917 aa14.76□□□□□ -0.05
SNX6-206ENST00000556162 HMBSP08397 361 aa14.76□□□□□ -0.05
SNX6-206ENST00000556162 ABCB4P21439 1286 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms