RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 BTBD10Q9BSF8 475 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 TMEM120AQ9BXJ8 343 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 TLE6Q9H808 572 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 DCLRE1BQ9H816 532 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 ALG13Q9NP73 1137 aaKnown RBP7.27□□□□□ -1.25
TDP1-213ENST00000555880 NGRNQ9NPE2 291 aaKnown RBP7.27□□□□□ -1.25
TDP1-213ENST00000555880 DONSONQ9NYP3 566 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 ZNF180Q9UJW8 692 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 TSPAN16Q9UKR8 245 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 MCM3APO60318 1980 aa7.27□□□□□ -1.25
TDP1-213ENST00000555880 BCLAF3A2AJT9 711 aaKnown RBP7.26□□□□□ -1.25
TDP1-213ENST00000555880 E5RJQ4 531 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 GPR25O00155 361 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 KLF11O14901 512 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 PEX10O60683 326 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 PEX11AO75192 247 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 USP2O75604 605 aaPredicted RBP7.26□□□□□ -1.25
TDP1-213ENST00000555880 TOMM70O94826 608 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 PGK2P07205 417 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 TXNP10599 105 aaKnown RBP7.26□□□□□ -1.25
TDP1-213ENST00000555880 ESRRAP11474 423 aaPredicted RBP7.26□□□□□ -1.25
TDP1-213ENST00000555880 ZFXP17010 805 aaPredicted RBP7.26□□□□□ -1.25
TDP1-213ENST00000555880 BGNP21810 368 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 SERPINB3P29508 390 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 IREB2P48200 963 aaKnown RBP7.26□□□□□ -1.25
TDP1-213ENST00000555880 YWHAZP63104 245 aaKnown RBP7.26□□□□□ -1.25
TDP1-213ENST00000555880 IGBP1P78318 339 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 POU5F1BQ06416 359 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 CBLBQ13191 982 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 TTLL4Q14679 1199 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 KRT72Q14CN4 511 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 PRKD1Q15139 912 aaPredicted RBP7.26□□□□□ -1.25
TDP1-213ENST00000555880 CCDC6Q16204 474 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 C15orf59Q2T9L4 293 aaPredicted RBP7.26□□□□□ -1.25
TDP1-213ENST00000555880 GOLGA7BQ2TAP0 167 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 PLEKHG4Q58EX7 1191 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 SYCP2LQ5T4T6 812 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 BZW1Q7L1Q6 419 aaKnown RBP7.26□□□□□ -1.25
TDP1-213ENST00000555880 APBB1IPQ7Z5R6 666 aaPredicted RBP7.26□□□□□ -1.25
TDP1-213ENST00000555880 SESTD1Q86VW0 696 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 NT5DC4Q86YG4 428 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 LMNTD2Q8IXW0 634 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.26□□□□□ -1.25
TDP1-213ENST00000555880 ZNF276Q8N554 614 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 TEX9Q8N6V9 391 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 PLD5Q8N7P1 536 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 USP6NLQ92738 828 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 STMN2Q93045 179 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 RTP4Q96DX8 246 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 MMP19Q99542 508 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 ZNF670Q9BS34 389 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 DNAI2Q9GZS0 605 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 PDZD7Q9H5P4 517 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 MINDY3Q9H8M7 445 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 DPP3Q9NY33 737 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 STOML1Q9UBI4 398 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 HESX1Q9UBX0 185 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 SUFUQ9UMX1 484 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 AKT3Q9Y243 479 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 C2CD2Q9Y426 696 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 POLR2AP24928 1970 aaKnown RBP7.26□□□□□ -1.25
TDP1-213ENST00000555880 A6NJR5 290 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 H0Y3Z8 333 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 PIK3R2O00459 728 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 AVILO75366 819 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 GRAP2O75791 330 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 C22orf31O95567 290 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 STAU1O95793 577 aaKnown RBP7.26□□□□□ -1.25
TDP1-213ENST00000555880 DLDP09622 509 aaKnown RBP7.26□□□□□ -1.25
TDP1-213ENST00000555880 TPBGLP0DKB5 382 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 SETSIPP0DME0 302 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 GNAZP19086 355 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 ETV4P43268 484 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 MAGEA6P43360 314 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 SERPINB9P50453 376 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 SARNPP82979 210 aaKnown RBP7.26□□□□□ -1.25
TDP1-213ENST00000555880 TMPRSS15P98073 1019 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 TTLL12Q14166 644 aaPredicted RBP7.26□□□□□ -1.25
TDP1-213ENST00000555880 CTC1Q2NKJ3 1217 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 MUM1Q2TAK8 710 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 PPP6R3Q5H9R7 873 aaPredicted RBP7.26□□□□□ -1.25
TDP1-213ENST00000555880 SH3PXD2AQ5TCZ1 1133 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 C9orf131Q5VYM1 1079 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 SLC9A4Q6AI14 798 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 ZDHHC17Q8IUH5 632 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 FBXO16Q8IX29 292 aaPredicted RBP7.26□□□□□ -1.25
TDP1-213ENST00000555880 MCUQ8NE86 351 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 RAB3IL1Q8TBN0 382 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 FAM172AQ8WUF8 416 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 AFG1LQ8WV93 481 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 PTPRN2Q92932 1015 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 SKA1Q96BD8 255 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 PTCD3Q96EY7 689 aaKnown RBP7.26□□□□□ -1.25
TDP1-213ENST00000555880 OXNAD1Q96HP4 312 aaPredicted RBP7.26□□□□□ -1.25
TDP1-213ENST00000555880 NAF1Q96HR8 494 aaKnown RBP7.26□□□□□ -1.25
TDP1-213ENST00000555880 ACAP3Q96P50 834 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 SYT17Q9BSW7 474 aa7.26□□□□□ -1.25
TDP1-213ENST00000555880 GCOM2Q9BZD3 368 aaPredicted RBP7.26□□□□□ -1.25
TDP1-213ENST00000555880 TRIM6Q9C030 488 aaPredicted RBP7.26□□□□□ -1.25
TDP1-213ENST00000555880 WWP1Q9H0M0 922 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms