RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 GLOD4Q9HC38 313 aa3.96□□□□□ -1.78
SRP54-209ENST00000555746 EPN1Q9Y6I3 576 aaPredicted RBP3.96□□□□□ -1.78
SRP54-209ENST00000555746 COL15A1P39059 1388 aa3.96□□□□□ -1.78
SRP54-209ENST00000555746 MAP3K5Q99683 1374 aa3.96□□□□□ -1.78
SRP54-209ENST00000555746 KIF27Q86VH2 1401 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 CASZ1Q86V15 1759 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 MAST1Q9Y2H9 1570 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 PZPP20742 1482 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 ARHGAP35Q9NRY4 1499 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 A1L4Q6 167 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 AGPSO00116 658 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 NPC1O15118 1278 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 COQ9O75208 318 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 SKAP2O75563 359 aaPredicted RBP3.95□□□□□ -1.78
SRP54-209ENST00000555746 TJP3O95049 919 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 NXPH3O95157 252 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 GLP2RO95838 553 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 ERBB2P04626 1255 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 IL6RP08887 468 aaPredicted RBP3.95□□□□□ -1.78
SRP54-209ENST00000555746 ARP10275 920 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 HGFP14210 728 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 TYRP1P17643 537 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 KRT4P19013 534 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 TACR2P21452 398 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 PCSK6P29122 969 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 PDIA3P30101 505 aaKnown RBP3.95□□□□□ -1.78
SRP54-209ENST00000555746 ADRA1BP35368 520 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 TRAPPC10P48553 1259 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 GATMP50440 423 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 NSUN2Q08J23 767 aaKnown RBP eCLIP3.95□□□□□ -1.78
SRP54-209ENST00000555746 GALNT1Q10472 559 aaPredicted RBP3.95□□□□□ -1.78
SRP54-209ENST00000555746 FOXI1Q12951 378 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 FHL3Q13643 280 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 BMPR2Q13873 1038 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 PTK2BQ14289 1009 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 SPARCL1Q14515 664 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 CLCA4Q14CN2 919 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 TBCCQ15814 346 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 TUBB8Q3ZCM7 444 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 ZACNQ401N2 412 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 PRR16Q569H4 304 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 TMTC4Q5T4D3 741 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 SLC9A4Q6AI14 798 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 ABLIM2Q6H8Q1 611 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 KRTAP5-3Q6L8H2 238 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 GGT6Q6P531 493 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 USP49Q70CQ1 688 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 USP51Q70EK9 711 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 ZNF627Q7L945 461 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 MBD3L2Q8NHZ7 208 aaPredicted RBP3.95□□□□□ -1.78
SRP54-209ENST00000555746 FAM71BQ8TC56 605 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 MUL1Q969V5 352 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 HIST1H2AAQ96QV6 131 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.95□□□□□ -1.782e-6■■■□□ 14.8
SRP54-209ENST00000555746 MYH16Q9H6N6 1097 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 TMOD4Q9NZQ9 345 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 IGSF9Q9P2J2 1179 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 DKK3Q9UBP4 350 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 GABRQQ9UN88 632 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 MAGED2Q9UNF1 606 aaPredicted RBP3.95□□□□□ -1.78
SRP54-209ENST00000555746 DTNAQ9Y4J8 743 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 MYO5CQ9NQX4 1742 aa3.95□□□□□ -1.78
SRP54-209ENST00000555746 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.95□□□□□ -1.78
SRP54-209ENST00000555746 CACNA1AO00555 2505 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 CCDC151A5D8V7 595 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 TMEM191CA6NGB0 347 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 M0R3H8 397 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 SYT5O00445 386 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 CCNT2O60583 730 aaKnown RBP3.94□□□□□ -1.78
SRP54-209ENST00000555746 FZD7O75084 574 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 CSTBP04080 98 aaKnown RBP3.94□□□□□ -1.78
SRP54-209ENST00000555746 CHRM2P08172 466 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 ITGA5P08648 1049 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 PECAM1P16284 738 aaPredicted RBP3.94□□□□□ -1.78
SRP54-209ENST00000555746 ZFXP17010 805 aaPredicted RBP3.94□□□□□ -1.78
SRP54-209ENST00000555746 HTR7P34969 479 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 LIPAP38571 399 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 FOXO1Q12778 655 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 EIF2B5Q13144 721 aaKnown RBP3.94□□□□□ -1.78
SRP54-209ENST00000555746 ATP1A4Q13733 1029 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 BLMHQ13867 455 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 DHX8Q14562 1220 aaKnown RBP3.94□□□□□ -1.78
SRP54-209ENST00000555746 PUM1Q14671 1186 aaKnown RBP eCLIP3.94□□□□□ -1.78
SRP54-209ENST00000555746 PFKFB4Q16877 469 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 LY6KQ17RY6 165 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 TRIM71Q2Q1W2 868 aaKnown RBP3.94□□□□□ -1.78
SRP54-209ENST00000555746 TREML2Q5T2D2 321 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 GORABQ5T7V8 394 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 KAZNQ674X7 775 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 RAB11FIP4Q86YS3 637 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 UNC5CLQ8IV45 518 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 VRK3Q8IV63 474 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 EXOC8Q8IYI6 725 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 SLC44A3Q8N4M1 653 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 NKAPQ8N5F7 415 aaKnown RBP3.94□□□□□ -1.78
SRP54-209ENST00000555746 BEND2Q8NDZ0 799 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 SUPT20HQ8NEM7 779 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 SUN3Q8TAQ9 357 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 EID2BQ96D98 161 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 PDLIM2Q96JY6 352 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms