RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 CDK5RAP1Q96SZ6 601 aaKnown RBP21.5■■□□□ 1.03
VTI1B-205ENST00000555543 SPHK2Q9NRA0 654 aa21.5■■□□□ 1.03
VTI1B-205ENST00000555543 LSM7Q9UK45 103 aaKnown RBP21.5■■□□□ 1.03
VTI1B-205ENST00000555543 HOXC11O43248 304 aaPredicted RBP21.49■■□□□ 1.03
VTI1B-205ENST00000555543 LILRB5O75023 590 aa21.49■■□□□ 1.03
VTI1B-205ENST00000555543 KLKB1P03952 638 aa21.49■■□□□ 1.03
VTI1B-205ENST00000555543 HMBSP08397 361 aa21.49■■□□□ 1.03
VTI1B-205ENST00000555543 EEF1GP26641 437 aaKnown RBP21.49■■□□□ 1.03
VTI1B-205ENST00000555543 GNA15P30679 374 aa21.49■■□□□ 1.03
VTI1B-205ENST00000555543 GPD2P43304 727 aa21.49■■□□□ 1.03
VTI1B-205ENST00000555543 FBXO43Q4G163 708 aa21.49■■□□□ 1.03
VTI1B-205ENST00000555543 CDKAL1Q5VV42 579 aa21.49■■□□□ 1.03
VTI1B-205ENST00000555543 RSRC2Q7L4I2 434 aaKnown RBP21.49■■□□□ 1.03
VTI1B-205ENST00000555543 ETFBKMTQ8IXQ9 262 aa21.49■■□□□ 1.03
VTI1B-205ENST00000555543 RPLP0P6Q8NHW5 317 aa21.49■■□□□ 1.03
VTI1B-205ENST00000555543 EDEM1Q92611 657 aa21.49■■□□□ 1.03
VTI1B-205ENST00000555543 FAM81BQ96LP2 452 aa21.49■■□□□ 1.03
VTI1B-205ENST00000555543 CNGB3Q9NQW8 809 aa21.49■■□□□ 1.03
VTI1B-205ENST00000555543 TAB2Q9NYJ8 693 aa21.49■■□□□ 1.03
VTI1B-205ENST00000555543 MARCH2Q9P0N8 246 aa21.49■■□□□ 1.03
VTI1B-205ENST00000555543 TMEM63CQ9P1W3 806 aa21.49■■□□□ 1.03
VTI1B-205ENST00000555543 GPR179Q6PRD1 2367 aa21.49■■□□□ 1.03
VTI1B-205ENST00000555543 CFAP54Q96N23 3096 aa21.49■■□□□ 1.03
VTI1B-205ENST00000555543 ZNF292O60281 2723 aa21.48■■□□□ 1.03
VTI1B-205ENST00000555543 CHURC1-FNTBB4DL54 471 aa21.48■■□□□ 1.03
VTI1B-205ENST00000555543 K7EQS6 105 aa21.48■■□□□ 1.03
VTI1B-205ENST00000555543 THAP12O43422 761 aa21.48■■□□□ 1.03
VTI1B-205ENST00000555543 PNMA6AP0CW24 399 aaPredicted RBP21.48■■□□□ 1.03
VTI1B-205ENST00000555543 USP8P40818 1118 aa21.48■■□□□ 1.03
VTI1B-205ENST00000555543 EIF2DP41214 584 aaKnown RBP21.48■■□□□ 1.03
VTI1B-205ENST00000555543 GAD2Q05329 585 aa21.48■■□□□ 1.03
VTI1B-205ENST00000555543 KDSRQ06136 332 aa21.48■■□□□ 1.03
VTI1B-205ENST00000555543 KCNMA1Q12791 1236 aa21.48■■□□□ 1.03
VTI1B-205ENST00000555543 PPP2R5DQ14738 602 aa21.48■■□□□ 1.03
VTI1B-205ENST00000555543 STX1AQ16623 288 aa21.48■■□□□ 1.03
VTI1B-205ENST00000555543 BSPRYQ5W0U4 402 aa21.48■■□□□ 1.03
VTI1B-205ENST00000555543 BTBD8Q5XKL5 378 aa21.48■■□□□ 1.03
VTI1B-205ENST00000555543 SASS6Q6UVJ0 657 aa21.48■■□□□ 1.03
VTI1B-205ENST00000555543 PHTF2Q8N3S3 785 aa21.48■■□□□ 1.03
VTI1B-205ENST00000555543 NAT16Q8N8M0 369 aa21.48■■□□□ 1.03
VTI1B-205ENST00000555543 ZNF606Q8WXB4 792 aa21.48■■□□□ 1.03
VTI1B-205ENST00000555543 P2RY11Q96G91 374 aa21.48■■□□□ 1.03
VTI1B-205ENST00000555543 FAM126AQ9BYI3 521 aaPredicted RBP21.48■■□□□ 1.03
VTI1B-205ENST00000555543 CYTH4Q9UIA0 394 aa21.48■■□□□ 1.03
VTI1B-205ENST00000555543 DNAJC12Q9UKB3 198 aa21.48■■□□□ 1.03
VTI1B-205ENST00000555543 SLC12A8A0AV02 714 aa21.47■■□□□ 1.03
VTI1B-205ENST00000555543 PES1O00541 588 aaKnown RBP21.47■■□□□ 1.03
VTI1B-205ENST00000555543 CHRM1P11229 460 aaPredicted RBP21.47■■□□□ 1.03
VTI1B-205ENST00000555543 RPL34P49207 117 aaKnown RBP21.47■■□□□ 1.03
VTI1B-205ENST00000555543 SEC13P55735 322 aa21.47■■□□□ 1.03
VTI1B-205ENST00000555543 ANO4Q32M45 955 aa21.47■■□□□ 1.03
VTI1B-205ENST00000555543 ATRIPQ8WXE1 791 aa21.47■■□□□ 1.03
VTI1B-205ENST00000555543 HSFY1Q96LI6 401 aa21.47■■□□□ 1.03
VTI1B-205ENST00000555543 PNKPQ96T60 521 aa21.47■■□□□ 1.03
VTI1B-205ENST00000555543 SEMA4AQ9H3S1 761 aa21.47■■□□□ 1.03
VTI1B-205ENST00000555543 ANO10Q9NW15 660 aa21.47■■□□□ 1.03
VTI1B-205ENST00000555543 GVINP1Q7Z2Y8 2422 aa21.47■■□□□ 1.03
VTI1B-205ENST00000555543 TRIM24O15164 1050 aa21.46■■□□□ 1.03
VTI1B-205ENST00000555543 MED7O43513 233 aa21.46■■□□□ 1.03
VTI1B-205ENST00000555543 KAT7O95251 611 aa21.46■■□□□ 1.03
VTI1B-205ENST00000555543 LMNAP02545 664 aaKnown RBP21.46■■□□□ 1.03
VTI1B-205ENST00000555543 CORO1AP31146 461 aaKnown RBP21.46■■□□□ 1.03
VTI1B-205ENST00000555543 FNTBP49356 437 aa21.46■■□□□ 1.03
VTI1B-205ENST00000555543 COG7P83436 770 aa21.46■■□□□ 1.03
VTI1B-205ENST00000555543 KRT31Q15323 416 aa21.46■■□□□ 1.03
VTI1B-205ENST00000555543 MEA1Q16626 185 aa21.46■■□□□ 1.03
VTI1B-205ENST00000555543 HEATR6Q6AI08 1181 aaKnown RBP21.46■■□□□ 1.03
VTI1B-205ENST00000555543 TPGS1Q6ZTW0 290 aa21.46■■□□□ 1.03
VTI1B-205ENST00000555543 SUMF1Q8NBK3 374 aa21.46■■□□□ 1.03
VTI1B-205ENST00000555543 USP33Q8TEY7 942 aa21.46■■□□□ 1.03
VTI1B-205ENST00000555543 IRGQQ8WZA9 623 aa21.46■■□□□ 1.03
VTI1B-205ENST00000555543 MIS12Q9H081 205 aa21.46■■□□□ 1.03
VTI1B-205ENST00000555543 ARHGEF4Q9NR80 690 aa21.46■■□□□ 1.03
VTI1B-205ENST00000555543 OLA1Q9NTK5 396 aaKnown RBP21.46■■□□□ 1.03
VTI1B-205ENST00000555543 FANCLQ9NW38 375 aa21.46■■□□□ 1.03
VTI1B-205ENST00000555543 SFMBT1Q9UHJ3 866 aa21.46■■□□□ 1.03
VTI1B-205ENST00000555543 STRIP2Q9ULQ0 834 aa21.46■■□□□ 1.03
VTI1B-205ENST00000555543 FHOD1Q9Y613 1164 aa21.46■■□□□ 1.03
VTI1B-205ENST00000555543 FAM186AA6NE01 2351 aa21.46■■□□□ 1.03
VTI1B-205ENST00000555543 OTOGLQ3ZCN5 2332 aa21.45■■□□□ 1.02
VTI1B-205ENST00000555543 NEDD8-MDP1E9PL57 170 aa21.45■■□□□ 1.02
VTI1B-205ENST00000555543 FOXN3O00409 490 aaPredicted RBP21.45■■□□□ 1.02
VTI1B-205ENST00000555543 TULP3O75386 442 aa21.45■■□□□ 1.02
VTI1B-205ENST00000555543 NRLP54845 237 aa21.45■■□□□ 1.02
VTI1B-205ENST00000555543 FMNL3Q8IVF7 1028 aa21.45■■□□□ 1.02
VTI1B-205ENST00000555543 RNF139Q8WU17 664 aa21.45■■□□□ 1.02
VTI1B-205ENST00000555543 BBS2Q9BXC9 721 aa21.45■■□□□ 1.02
VTI1B-205ENST00000555543 VPS16Q9H269 839 aa21.45■■□□□ 1.02
VTI1B-205ENST00000555543 ST7Q9NRC1 585 aa21.45■■□□□ 1.02
VTI1B-205ENST00000555543 ABCC13Q9NSE7 274 aa21.45■■□□□ 1.02
VTI1B-205ENST00000555543 MARK1Q9P0L2 795 aa21.45■■□□□ 1.02
VTI1B-205ENST00000555543 AGO1Q9UL18 857 aaKnown RBP21.45■■□□□ 1.02
VTI1B-205ENST00000555543 EP300Q09472 2414 aaPredicted RBP21.45■■□□□ 1.02
VTI1B-205ENST00000555543 MSI1O43347 362 aaKnown RBP21.44■■□□□ 1.02
VTI1B-205ENST00000555543 ATG13O75143 517 aa21.44■■□□□ 1.02
VTI1B-205ENST00000555543 FBXO21O94952 628 aa21.44■■□□□ 1.02
VTI1B-205ENST00000555543 LTFP02788 710 aa21.44■■□□□ 1.02
VTI1B-205ENST00000555543 APODP05090 189 aa21.44■■□□□ 1.02
VTI1B-205ENST00000555543 TYRP14679 529 aa21.44■■□□□ 1.02
VTI1B-205ENST00000555543 CLCN1P35523 988 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms