RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 CPXM1Q96SM3 734 aa11.42□□□□□ -0.58
SHMT2-218ENST00000555213 SLC46A2Q9BY10 475 aa11.42□□□□□ -0.58
SHMT2-218ENST00000555213 THAP2Q9H0W7 228 aa11.42□□□□□ -0.58
SHMT2-218ENST00000555213 TRPV4Q9HBA0 871 aa11.42□□□□□ -0.58
SHMT2-218ENST00000555213 OLA1Q9NTK5 396 aaKnown RBP11.42□□□□□ -0.58
SHMT2-218ENST00000555213 OBP2AQ9NY56 170 aa11.42□□□□□ -0.58
SHMT2-218ENST00000555213 LIMD1Q9UGP4 676 aa11.42□□□□□ -0.58
SHMT2-218ENST00000555213 CHORDC1Q9UHD1 332 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-218ENST00000555213 CYTH4Q9UIA0 394 aa11.42□□□□□ -0.58
SHMT2-218ENST00000555213 STRIP2Q9ULQ0 834 aa11.42□□□□□ -0.58
SHMT2-218ENST00000555213 NUMBLQ9Y6R0 609 aa11.42□□□□□ -0.58
SHMT2-218ENST00000555213 MYH10P35580 1976 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 A0A0A6YYK5 440 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-218ENST00000555213 ANKRD62A6NC57 917 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 ANHXE9PGG2 379 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 CAPN9O14815 690 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 COCHO43405 550 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 KRT86O43790 486 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 HSF2BPO75031 334 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 GABBR2O75899 941 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 OLFM2O95897 454 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 LTFP02788 710 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 CYP1A2P05177 515 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 CALB1P05937 261 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 RARGP13631 454 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 ATP5C1P36542 298 aaKnown RBP11.41□□□□□ -0.58
SHMT2-218ENST00000555213 SLC7A9P82251 487 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 CENPCQ03188 943 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 ZNF268Q14587 947 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-218ENST00000555213 PTPN20Q4JDL3 420 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 ARHGAP29Q52LW3 1261 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 EFHC1Q5JVL4 640 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 ZNF569Q5MCW4 686 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 KLHDC10Q6PID8 442 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 PHF13Q86YI8 300 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-218ENST00000555213 SCUBE3Q8IX30 993 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 YAF2Q8IY57 180 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 MCOLN2Q8IZK6 566 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 ARL14EPQ8N8R7 260 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-218ENST00000555213 SLC35G2Q8TBE7 412 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 DEPDC1BQ8WUY9 529 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 ELSPBP1Q96BH3 223 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 C18orf8Q96DM3 657 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 ZSWIM3Q96MP5 696 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 KXD1Q9BQD3 176 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 CCSER2Q9H7U1 834 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 KCNK12Q9HB15 430 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 ABCC13Q9NSE7 274 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 TDP1Q9NUW8 608 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.41□□□□□ -0.58
SHMT2-218ENST00000555213 THG1LQ9NWX6 298 aaKnown RBP11.41□□□□□ -0.58
SHMT2-218ENST00000555213 MYO1AQ9UBC5 1043 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 DNAI1Q9UI46 699 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 DNMT3LQ9UJW3 386 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 ARHGAP26Q9UNA1 814 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 CAPN6Q9Y6Q1 641 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 MUC3AQ02505 3323 aa11.41□□□□□ -0.58
SHMT2-218ENST00000555213 MYO16Q9Y6X6 1858 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 PRUNE2Q8WUY3 3088 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 TCRBV5S1A1TA0A578 114 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 MACROD2A1Z1Q3 448 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 YJEFN3A6XGL0 299 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 E7ENQ6 273 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 KIF2AO00139 706 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-218ENST00000555213 NRG2O14511 850 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-218ENST00000555213 PAPSS1O43252 624 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-218ENST00000555213 BUB1O43683 1085 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 IPO7O95373 1038 aaKnown RBP11.4□□□□□ -0.58
SHMT2-218ENST00000555213 PRAMEF12O95522 483 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 ERBB2P04626 1255 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 GLI1P08151 1106 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 MMP8P22894 467 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 SCNN1AP37088 669 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 YWHAZP63104 245 aaKnown RBP11.4□□□□□ -0.58
SHMT2-218ENST00000555213 GPC5P78333 572 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 BSPRYQ5W0U4 402 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 OR6B2Q6IFH4 312 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 CC2D1AQ6P1N0 951 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-218ENST00000555213 PARM1Q6UWI2 310 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 MMS22LQ6ZRQ5 1243 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 FAM183BPQ6ZVS7 135 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 MON1BQ7L1V2 547 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 SLFN11Q7Z7L1 901 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 SCD5Q86SK9 330 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 ZNF276Q8N554 614 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 LRRC57Q8N9N7 239 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 TTC16Q8NEE8 873 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 USP13Q92995 863 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-218ENST00000555213 TRIM11Q96F44 468 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 NECAB3Q96P71 396 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-218ENST00000555213 C11orf70Q9BRQ4 267 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 TSGA10Q9BZW7 698 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 SMG9Q9H0W8 520 aaKnown RBP11.4□□□□□ -0.58
SHMT2-218ENST00000555213 NMUR1Q9HB89 426 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 POPDC2Q9HBU9 364 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 OSGEPQ9NPF4 335 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 ASNSD1Q9NWL6 643 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 SMPD4Q9NXE4 827 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 ADAM22Q9P0K1 906 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 WDR35Q9P2L0 1181 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms