RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 PRRG4Q9BZD6 226 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 WDCPQ9H6R7 721 aa7.08□□□□□ -1.28
SYNE2-216ENST00000555002 SF3B1O75533 1304 aaKnown RBP eCLIP7.07□□□□□ -1.28
SYNE2-216ENST00000555002 MEI4A8MW99 385 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 SSNA1O43805 119 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 OR10H2O60403 315 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 ANXA5P08758 320 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 PLD1Q13393 1074 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 DDHD1Q8NEL9 900 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 ENGASEQ8NFI3 743 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 MAP4K1Q92918 833 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 SMG5Q9UPR3 1016 aaKnown RBP7.07□□□□□ -1.28
SYNE2-216ENST00000555002 OR10H1Q9Y4A9 318 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 USP15Q9Y4E8 981 aaPredicted RBP7.07□□□□□ -1.28
SYNE2-216ENST00000555002 ABCC10Q5T3U5 1492 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 ANXA9O76027 345 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 ITGA8P53708 1063 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 RESTQ13127 1097 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 KYNUQ16719 465 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 ALG11Q2TAA5 492 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 SH2D3CQ8N5H7 860 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 SENP6Q9GZR1 1112 aaPredicted RBP7.07□□□□□ -1.28
SYNE2-216ENST00000555002 CYB561D2O14569 222 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 TYMPP19971 482 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 CTCFP49711 727 aaPredicted RBP7.07□□□□□ -1.28
SYNE2-216ENST00000555002 AMPD2Q01433 879 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 NFYCQ13952 458 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 CCDC144BQ3MJ40 725 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 KBTBD12Q3ZCT8 623 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 STRIP1Q5VSL9 837 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 DENND1BQ6P3S1 775 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 CYB5R4Q7L1T6 521 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 FRMD5Q7Z6J6 570 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 EPC1Q9H2F5 836 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 PHF11Q9UIL8 331 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 MORC2Q9Y6X9 1032 aaPredicted RBP7.07□□□□□ -1.28
SYNE2-216ENST00000555002 PTCH1Q13635 1447 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 RPAP1Q9BWH6 1393 aaPredicted RBP7.07□□□□□ -1.28
SYNE2-216ENST00000555002 AFF2P51816 1311 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 ATP10AO60312 1499 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 MAP3K6O95382 1288 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 GTF2H1P32780 548 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 ATP1A4Q13733 1029 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 LPCAT1Q8NF37 534 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 FAM120BQ96EK7 910 aaKnown RBP7.07□□□□□ -1.28
SYNE2-216ENST00000555002 UBE2OQ9C0C9 1292 aaKnown RBP7.07□□□□□ -1.28
SYNE2-216ENST00000555002 CASTOR2A6NHX0 329 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 M0QYT0 321 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 MYL12BO14950 172 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 PDE5AO76074 875 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 MAGEA4P43358 317 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 ZNF354BQ96LW1 612 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 ALKBH4Q9NXW9 302 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 AHSPQ9NZD4 102 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 APEX2Q9UBZ4 518 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 TNFSF13BQ9Y275 285 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 TBX22Q9Y458 520 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 CPDO75976 1380 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 LOC100506127A0A0U1RQW1 187 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 TAF4O00268 1085 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 TIMM44O43615 452 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 ATP5F1P24539 256 aaPredicted RBP7.07□□□□□ -1.28
SYNE2-216ENST00000555002 C21orf59P57076 290 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 STILQ15468 1287 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 SLC20A1Q8WUM9 679 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 PROX1Q92786 737 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 SERPINB12Q96P63 405 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 ILKAPQ9H0C8 392 aaPredicted RBP7.07□□□□□ -1.28
SYNE2-216ENST00000555002 VPS51Q9UID3 782 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 MSRAQ9UJ68 235 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 AXIN2Q9Y2T1 843 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 PCDHB9Q9Y5E1 797 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 SUPT7LO94864 414 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 RHOCP08134 193 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 RPL9P32969 192 aaKnown RBP7.07□□□□□ -1.28
SYNE2-216ENST00000555002 MAPK10P53779 464 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 MRNIPQ6NTE8 343 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 KIAA1324Q6UXG2 1013 aaKnown RBP7.07□□□□□ -1.28
SYNE2-216ENST00000555002 C16orf59Q7L2K0 433 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 ADGRF2Q8IZF7 708 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 TDRD5Q8NAT2 981 aaKnown RBP7.07□□□□□ -1.28
SYNE2-216ENST00000555002 SEMA4DQ92854 862 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 GRAMD1AQ96CP6 724 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 NCKAP1Q9Y2A7 1128 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 KNL1Q8NG31 2342 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 UNC13AQ9UPW8 1703 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 PSMD11O00231 422 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 BTN3A3O00478 584 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 C18orf25Q96B23 403 aaPredicted RBP7.07□□□□□ -1.28
SYNE2-216ENST00000555002 OMDQ99983 421 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 LRRC4BQ9NT99 713 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 DLGAP2Q9P1A6 1054 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 ZMYM5Q9UJ78 669 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 COL15A1P39059 1388 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 MGRN1O60291 552 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 ITGB3P05106 788 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 AMD1P17707 334 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.07□□□□□ -1.28
SYNE2-216ENST00000555002 LGALS3BPQ08380 585 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 C2CD6Q53TS8 623 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms