RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 VAV2P52735 878 aa13.09□□□□□ -0.31
SHMT2-214ENST00000554604 SLC5A3P53794 718 aa13.09□□□□□ -0.31
SHMT2-214ENST00000554604 NRLP54845 237 aa13.09□□□□□ -0.31
SHMT2-214ENST00000554604 MAP3K7CLP57077 242 aa13.09□□□□□ -0.31
SHMT2-214ENST00000554604 GRSF1Q12849 480 aaKnown RBP eCLIP13.09□□□□□ -0.31
SHMT2-214ENST00000554604 SPA17Q15506 151 aa13.09□□□□□ -0.31
SHMT2-214ENST00000554604 ZNF569Q5MCW4 686 aa13.09□□□□□ -0.31
SHMT2-214ENST00000554604 SFMBT2Q5VUG0 894 aa13.09□□□□□ -0.31
SHMT2-214ENST00000554604 DPY19L2P1Q6NXN4 242 aa13.09□□□□□ -0.31
SHMT2-214ENST00000554604 TSSK4Q6SA08 328 aa13.09□□□□□ -0.31
SHMT2-214ENST00000554604 KIAA1328Q86T90 577 aa13.09□□□□□ -0.31
SHMT2-214ENST00000554604 SPEM1Q8N4L4 309 aa13.09□□□□□ -0.31
SHMT2-214ENST00000554604 TTC39CQ8N584 583 aa13.09□□□□□ -0.31
SHMT2-214ENST00000554604 EHBP1Q8NDI1 1231 aa13.09□□□□□ -0.31
SHMT2-214ENST00000554604 OVCA2Q8WZ82 227 aa13.09□□□□□ -0.31
SHMT2-214ENST00000554604 SEMA4DQ92854 862 aa13.09□□□□□ -0.31
SHMT2-214ENST00000554604 CYFIP2Q96F07 1278 aa13.09□□□□□ -0.31
SHMT2-214ENST00000554604 SMOQ99835 787 aa13.09□□□□□ -0.31
SHMT2-214ENST00000554604 FAM126AQ9BYI3 521 aaPredicted RBP13.09□□□□□ -0.31
SHMT2-214ENST00000554604 TSGA10Q9BZW7 698 aa13.09□□□□□ -0.31
SHMT2-214ENST00000554604 FBXO44Q9H4M3 255 aa13.09□□□□□ -0.31
SHMT2-214ENST00000554604 ECT2Q9H8V3 914 aa13.09□□□□□ -0.31
SHMT2-214ENST00000554604 PRMT8Q9NR22 394 aaPredicted RBP13.09□□□□□ -0.31
SHMT2-214ENST00000554604 ZSCAN32Q9NX65 697 aa13.09□□□□□ -0.31
SHMT2-214ENST00000554604 SMPD4Q9NXE4 827 aa13.09□□□□□ -0.31
SHMT2-214ENST00000554604 AIPL1Q9NZN9 384 aa13.09□□□□□ -0.31
SHMT2-214ENST00000554604 CHORDC1Q9UHD1 332 aaPredicted RBP13.09□□□□□ -0.31
SHMT2-214ENST00000554604 DAAM1Q9Y4D1 1078 aa13.09□□□□□ -0.31
SHMT2-214ENST00000554604 PCDHGA2Q9Y5H1 932 aa13.09□□□□□ -0.31
SHMT2-214ENST00000554604 MRFAP1Q9Y605 127 aa13.09□□□□□ -0.31
SHMT2-214ENST00000554604 MYO18AQ92614 2054 aaKnown RBP13.08□□□□□ -0.32
SHMT2-214ENST00000554604 LEFTY2O00292 366 aa13.08□□□□□ -0.32
SHMT2-214ENST00000554604 TNFRSF10BO14763 440 aa13.08□□□□□ -0.32
SHMT2-214ENST00000554604 KRT86O43790 486 aa13.08□□□□□ -0.32
SHMT2-214ENST00000554604 CILPO75339 1184 aa13.08□□□□□ -0.32
SHMT2-214ENST00000554604 NFATC1O95644 943 aa13.08□□□□□ -0.32
SHMT2-214ENST00000554604 OAS1P00973 400 aaKnown RBP13.08□□□□□ -0.32
SHMT2-214ENST00000554604 SERPING1P05155 500 aa13.08□□□□□ -0.32
SHMT2-214ENST00000554604 MBL2P11226 248 aaPredicted RBP13.08□□□□□ -0.32
SHMT2-214ENST00000554604 TCF3P15923 654 aa13.08□□□□□ -0.32
SHMT2-214ENST00000554604 EIF4A3P38919 411 aaKnown RBP13.08□□□□□ -0.32
SHMT2-214ENST00000554604 KIF11P52732 1056 aa13.08□□□□□ -0.32
SHMT2-214ENST00000554604 MCCD1P59942 119 aaPredicted RBP13.08□□□□□ -0.32
SHMT2-214ENST00000554604 POLR2FP61218 127 aaKnown RBP13.08□□□□□ -0.32
SHMT2-214ENST00000554604 SLC7A9P82251 487 aa13.08□□□□□ -0.32
SHMT2-214ENST00000554604 CCINQ13939 588 aa13.08□□□□□ -0.32
SHMT2-214ENST00000554604 ZNF394Q53GI3 561 aa13.08□□□□□ -0.32
SHMT2-214ENST00000554604 HECTD3Q5T447 861 aa13.08□□□□□ -0.32
SHMT2-214ENST00000554604 HGSNATQ68CP4 663 aa13.08□□□□□ -0.32
SHMT2-214ENST00000554604 MAMSTRQ6ZN01 415 aa13.08□□□□□ -0.32
SHMT2-214ENST00000554604 GBP6Q6ZN66 633 aa13.08□□□□□ -0.32
SHMT2-214ENST00000554604 DDX42Q86XP3 938 aaKnown RBP eCLIP13.08□□□□□ -0.32
SHMT2-214ENST00000554604 TXLNBQ8N3L3 684 aa13.08□□□□□ -0.32
SHMT2-214ENST00000554604 SYNPOQ8N3V7 929 aa13.08□□□□□ -0.32
SHMT2-214ENST00000554604 TSC1Q92574 1164 aa13.08□□□□□ -0.32
SHMT2-214ENST00000554604 JAKMIP2Q96AA8 810 aa13.08□□□□□ -0.32
SHMT2-214ENST00000554604 FAXDC2Q96IV6 333 aa13.08□□□□□ -0.32
SHMT2-214ENST00000554604 HEXIM2Q96MH2 286 aaKnown RBP13.08□□□□□ -0.32
SHMT2-214ENST00000554604 TWNKQ96RR1 684 aa13.08□□□□□ -0.32
SHMT2-214ENST00000554604 HNRNPABQ99729 332 aaKnown RBP13.08□□□□□ -0.32
SHMT2-214ENST00000554604 HINFPQ9BQA5 517 aa13.08□□□□□ -0.32
SHMT2-214ENST00000554604 IRX2Q9BZI1 471 aaPredicted RBP13.08□□□□□ -0.32
SHMT2-214ENST00000554604 NACA2Q9H009 215 aa13.08□□□□□ -0.32
SHMT2-214ENST00000554604 RNF38Q9H0F5 515 aa13.08□□□□□ -0.32
SHMT2-214ENST00000554604 COMMD8Q9NX08 183 aa13.08□□□□□ -0.32
SHMT2-214ENST00000554604 CPQQ9Y646 472 aa13.08□□□□□ -0.32
SHMT2-214ENST00000554604 CTAGE9A4FU28 777 aa13.07□□□□□ -0.32
SHMT2-214ENST00000554604 TRDMT1O14717 391 aaKnown RBP13.07□□□□□ -0.32
SHMT2-214ENST00000554604 SLC9A3R1O14745 358 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-214ENST00000554604 BEST1O76090 585 aa13.07□□□□□ -0.32
SHMT2-214ENST00000554604 PON1P27169 355 aa13.07□□□□□ -0.32
SHMT2-214ENST00000554604 GJA4P35212 333 aa13.07□□□□□ -0.32
SHMT2-214ENST00000554604 SATB1Q01826 763 aa13.07□□□□□ -0.32
SHMT2-214ENST00000554604 GAS6Q14393 721 aa13.07□□□□□ -0.32
SHMT2-214ENST00000554604 EXOC3L4Q17RC7 722 aa13.07□□□□□ -0.32
SHMT2-214ENST00000554604 ASTE1Q2TB18 679 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-214ENST00000554604 EML3Q32P44 896 aa13.07□□□□□ -0.32
SHMT2-214ENST00000554604 CBWD6Q4V339 395 aa13.07□□□□□ -0.32
SHMT2-214ENST00000554604 TMEM196Q5HYL7 178 aa13.07□□□□□ -0.32
SHMT2-214ENST00000554604 CBWD3Q5JTY5 395 aa13.07□□□□□ -0.32
SHMT2-214ENST00000554604 CBWD5Q5RIA9 395 aa13.07□□□□□ -0.32
SHMT2-214ENST00000554604 CCDC122Q5T0U0 273 aa13.07□□□□□ -0.32
SHMT2-214ENST00000554604 Q6ZS52 159 aa13.07□□□□□ -0.32
SHMT2-214ENST00000554604 SLC35F6Q8N357 371 aa13.07□□□□□ -0.32
SHMT2-214ENST00000554604 ZMIZ2Q8NF64 920 aa13.07□□□□□ -0.32
SHMT2-214ENST00000554604 NAPGQ99747 312 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-214ENST00000554604 P2RY13Q9BPV8 354 aa13.07□□□□□ -0.32
SHMT2-214ENST00000554604 CRACR2AQ9BSW2 395 aa13.07□□□□□ -0.32
SHMT2-214ENST00000554604 LINC00597Q9H2U6 94 aa13.07□□□□□ -0.32
SHMT2-214ENST00000554604 CSNK1G1Q9HCP0 422 aa13.07□□□□□ -0.32
SHMT2-214ENST00000554604 NLRC4Q9NPP4 1024 aa13.07□□□□□ -0.32
SHMT2-214ENST00000554604 TLR8Q9NR97 1041 aaKnown RBP13.07□□□□□ -0.32
SHMT2-214ENST00000554604 CISHQ9NSE2 258 aa13.07□□□□□ -0.32
SHMT2-214ENST00000554604 IL37Q9NZH6 218 aa13.07□□□□□ -0.32
SHMT2-214ENST00000554604 GMIPQ9P107 970 aa13.07□□□□□ -0.32
SHMT2-214ENST00000554604 CFAP97Q9P2B7 532 aa13.07□□□□□ -0.32
SHMT2-214ENST00000554604 EFCAB8A8MWE9 144 aa13.06□□□□□ -0.32
SHMT2-214ENST00000554604 PJA2O43164 708 aa13.06□□□□□ -0.32
SHMT2-214ENST00000554604 COCHO43405 550 aa13.06□□□□□ -0.32
SHMT2-214ENST00000554604 AKR1B10O60218 316 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms