RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 XPO1O14980 1071 aaKnown RBP10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 GREM1O60565 184 aa10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 AFPP02771 609 aaKnown RBP10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 SETSIPP0DME0 302 aa10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 RALAP11233 206 aa10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 RARGP13631 454 aa10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 PLA2G4AP47712 749 aa10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 FNTBP49356 437 aa10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 STX17P56962 302 aa10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 MRPS21P82921 87 aaKnown RBP10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 GAD2Q05329 585 aa10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 DMWDQ09019 674 aa10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 BST2Q10589 180 aaKnown RBP10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 KCNH2Q12809 1159 aa10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 LRMPQ12912 555 aa10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 STILQ15468 1287 aa10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 GOLGA7BQ2TAP0 167 aa10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 HSF5Q4G112 596 aaPredicted RBP10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 LY6G5CQ5SRR4 150 aa10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 PM20D1Q6GTS8 502 aa10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 LAIR1Q6GTX8 287 aa10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 TTC30AQ86WT1 665 aa10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 BBS7Q8IWZ6 715 aa10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 MLKLQ8NB16 471 aa10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 RPLP0P6Q8NHW5 317 aa10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 USP33Q8TEY7 942 aa10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 PNKPQ96T60 521 aa10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 HINFPQ9BQA5 517 aa10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 SRRTQ9BXP5 876 aaKnown RBP10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 SPHK2Q9NRA0 654 aa10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 NCDNQ9UBB6 729 aa10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 NAGPAQ9UK23 515 aa10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 LSM7Q9UK45 103 aaKnown RBP10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 PLXND1Q9Y4D7 1925 aa10.94□□□□□ -0.66
PTCD2P1-201ENST00000554393 K7EQS6 105 aa10.93□□□□□ -0.66
PTCD2P1-201ENST00000554393 ARHGAP33O14559 1287 aa10.93□□□□□ -0.66
PTCD2P1-201ENST00000554393 LRP3O75074 770 aa10.93□□□□□ -0.66
PTCD2P1-201ENST00000554393 TBX18O95935 607 aa10.93□□□□□ -0.66
PTCD2P1-201ENST00000554393 APODP05090 189 aa10.93□□□□□ -0.66
PTCD2P1-201ENST00000554393 IRF1P10914 325 aa10.93□□□□□ -0.66
PTCD2P1-201ENST00000554393 CD19P15391 556 aa10.93□□□□□ -0.66
PTCD2P1-201ENST00000554393 GRIA2P42262 883 aa10.93□□□□□ -0.66
PTCD2P1-201ENST00000554393 COG7P83436 770 aa10.93□□□□□ -0.66
PTCD2P1-201ENST00000554393 PDE4CQ08493 712 aa10.93□□□□□ -0.66
PTCD2P1-201ENST00000554393 SIM2Q14190 667 aaPredicted RBP10.93□□□□□ -0.66
PTCD2P1-201ENST00000554393 CAMK4Q16566 473 aa10.93□□□□□ -0.66
PTCD2P1-201ENST00000554393 PKDCCQ504Y2 493 aa10.93□□□□□ -0.66
PTCD2P1-201ENST00000554393 C10orf120Q5SQS8 335 aa10.93□□□□□ -0.66
PTCD2P1-201ENST00000554393 BTBD8Q5XKL5 378 aa10.93□□□□□ -0.66
PTCD2P1-201ENST00000554393 TMEM270Q6UE05 265 aa10.93□□□□□ -0.66
PTCD2P1-201ENST00000554393 LCLAT1Q6UWP7 414 aa10.93□□□□□ -0.66
PTCD2P1-201ENST00000554393 ETFBKMTQ8IXQ9 262 aa10.93□□□□□ -0.66
PTCD2P1-201ENST00000554393 SCML4Q8N228 414 aa10.93□□□□□ -0.66
PTCD2P1-201ENST00000554393 PPM1KQ8N3J5 372 aa10.93□□□□□ -0.66
PTCD2P1-201ENST00000554393 EHBP1Q8NDI1 1231 aa10.93□□□□□ -0.66
PTCD2P1-201ENST00000554393 KCTD13Q8WZ19 329 aa10.93□□□□□ -0.66
PTCD2P1-201ENST00000554393 FAM81BQ96LP2 452 aa10.93□□□□□ -0.66
PTCD2P1-201ENST00000554393 CLSTN2Q9H4D0 955 aa10.93□□□□□ -0.66
PTCD2P1-201ENST00000554393 MARK1Q9P0L2 795 aa10.93□□□□□ -0.66
PTCD2P1-201ENST00000554393 EBF1Q9UH73 591 aa10.93□□□□□ -0.66
PTCD2P1-201ENST00000554393 GMEB2Q9UKD1 530 aa10.93□□□□□ -0.66
PTCD2P1-201ENST00000554393 RALYQ9UKM9 306 aaKnown RBP10.93□□□□□ -0.66
PTCD2P1-201ENST00000554393 ZNF510Q9Y2H8 683 aa10.93□□□□□ -0.66
PTCD2P1-201ENST00000554393 SCAMP3O14828 347 aaKnown RBP10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 HRO43593 1189 aa10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 CACNG3O60359 315 aa10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 STC2O76061 302 aa10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 KAT7O95251 611 aa10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 APBB3O95704 486 aa10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 ZBED1O96006 694 aa10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 RETP07949 1114 aa10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 TNFRSF4P43489 277 aa10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 TKTL1P51854 596 aa10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 ZNF132P52740 706 aa10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 YWHAGP61981 247 aaKnown RBP eCLIP10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 DMC1Q14565 340 aa10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 CNGA2Q16280 664 aa10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 MEA1Q16626 185 aa10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 TSR1Q2NL82 804 aaKnown RBP10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 HEATR6Q6AI08 1181 aaKnown RBP10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 Q6ZNB5 142 aa10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 NUDT18Q6ZVK8 323 aa10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 ENOSF1Q7L5Y1 443 aa10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 C12orf40Q86WS4 652 aa10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 TMEM25Q86YD3 366 aa10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 PHTF2Q8N3S3 785 aa10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 GAB3Q8WWW8 586 aa10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 WBP2Q969T9 261 aa10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 CNOT6LQ96LI5 555 aaKnown RBP10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 DCLK3Q9C098 648 aa10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 INTS2Q9H0H0 1204 aaKnown RBP10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 LRRC4Q9HBW1 653 aa10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 ARHGEF4Q9NR80 690 aa10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 OLA1Q9NTK5 396 aaKnown RBP10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 WDR35Q9P2L0 1181 aa10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 STRIP2Q9ULQ0 834 aa10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 MMP17Q9ULZ9 603 aa10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 CNTN6Q9UQ52 1028 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms