RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 BBS2Q9BXC9 721 aa19.13■□□□□ 0.65
SHMT2-206ENST00000553529 CLSTN2Q9H4D0 955 aa19.13■□□□□ 0.65
SHMT2-206ENST00000553529 RXFP3Q9NSD7 469 aa19.13■□□□□ 0.65
SHMT2-206ENST00000553529 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.13■□□□□ 0.65
SHMT2-206ENST00000553529 SLC12A8A0AV02 714 aa19.12■□□□□ 0.65
SHMT2-206ENST00000553529 PRRT4C9JH25 899 aa19.12■□□□□ 0.65
SHMT2-206ENST00000553529 M0QYV0 167 aa19.12■□□□□ 0.65
SHMT2-206ENST00000553529 HOXC11O43248 304 aaPredicted RBP19.12■□□□□ 0.65
SHMT2-206ENST00000553529 GDF9O60383 454 aa19.12■□□□□ 0.65
SHMT2-206ENST00000553529 RPP40O75818 363 aaKnown RBP19.12■□□□□ 0.65
SHMT2-206ENST00000553529 ZBED1O96006 694 aa19.12■□□□□ 0.65
SHMT2-206ENST00000553529 AFPP02771 609 aaKnown RBP19.12■□□□□ 0.65
SHMT2-206ENST00000553529 PNMA6AP0CW24 399 aaPredicted RBP19.12■□□□□ 0.65
SHMT2-206ENST00000553529 VDRP11473 427 aa19.12■□□□□ 0.65
SHMT2-206ENST00000553529 TYRP14679 529 aa19.12■□□□□ 0.65
SHMT2-206ENST00000553529 ID4P47928 161 aa19.12■□□□□ 0.65
SHMT2-206ENST00000553529 ZNF132P52740 706 aa19.12■□□□□ 0.65
SHMT2-206ENST00000553529 MARSP56192 900 aaKnown RBP19.12■□□□□ 0.65
SHMT2-206ENST00000553529 BST2Q10589 180 aaKnown RBP19.12■□□□□ 0.65
SHMT2-206ENST00000553529 FBXO43Q4G163 708 aa19.12■□□□□ 0.65
SHMT2-206ENST00000553529 C10orf76Q5T2E6 689 aa19.12■□□□□ 0.65
SHMT2-206ENST00000553529 EGFLAMQ63HQ2 1017 aa19.12■□□□□ 0.65
SHMT2-206ENST00000553529 GAB3Q8WWW8 586 aa19.12■□□□□ 0.65
SHMT2-206ENST00000553529 RLN3Q8WXF3 142 aa19.12■□□□□ 0.65
SHMT2-206ENST00000553529 FAXDC2Q96IV6 333 aa19.12■□□□□ 0.65
SHMT2-206ENST00000553529 DNAJC17Q9NVM6 304 aaKnown RBP19.12■□□□□ 0.65
SHMT2-206ENST00000553529 TJP2Q9UDY2 1190 aa19.12■□□□□ 0.65
SHMT2-206ENST00000553529 RWDD2AQ9UIY3 292 aa19.12■□□□□ 0.65
SHMT2-206ENST00000553529 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.12■□□□□ 0.65
SHMT2-206ENST00000553529 WDR87Q6ZQQ6 2873 aa19.12■□□□□ 0.65
SHMT2-206ENST00000553529 ZNF292O60281 2723 aa19.11■□□□□ 0.65
SHMT2-206ENST00000553529 ATG13O75143 517 aa19.11■□□□□ 0.65
SHMT2-206ENST00000553529 APODP05090 189 aa19.11■□□□□ 0.65
SHMT2-206ENST00000553529 CCDC192P0DO97 292 aa19.11■□□□□ 0.65
SHMT2-206ENST00000553529 TRIM21P19474 475 aaKnown RBP19.11■□□□□ 0.65
SHMT2-206ENST00000553529 TBXAS1P24557 533 aaPredicted RBP19.11■□□□□ 0.65
SHMT2-206ENST00000553529 CORO1AP31146 461 aaKnown RBP19.11■□□□□ 0.65
SHMT2-206ENST00000553529 HOXA6P31267 233 aa19.11■□□□□ 0.65
SHMT2-206ENST00000553529 DGKEP52429 567 aa19.11■□□□□ 0.65
SHMT2-206ENST00000553529 RSPO4Q2I0M5 234 aaPredicted RBP19.11■□□□□ 0.65
SHMT2-206ENST00000553529 LAIR1Q6GTX8 287 aa19.11■□□□□ 0.65
SHMT2-206ENST00000553529 DENND1BQ6P3S1 775 aa19.11■□□□□ 0.65
SHMT2-206ENST00000553529 DENND1CQ8IV53 801 aa19.11■□□□□ 0.65
SHMT2-206ENST00000553529 TSTD1Q8NFU3 115 aa19.11■□□□□ 0.65
SHMT2-206ENST00000553529 SLC6A17Q9H1V8 727 aa19.11■□□□□ 0.65
SHMT2-206ENST00000553529 ARRDC1-AS1Q9H2J1 176 aa19.11■□□□□ 0.65
SHMT2-206ENST00000553529 LRRC4Q9HBW1 653 aa19.11■□□□□ 0.65
SHMT2-206ENST00000553529 CD93Q9NPY3 652 aa19.11■□□□□ 0.65
SHMT2-206ENST00000553529 MARCH2Q9P0N8 246 aa19.11■□□□□ 0.65
SHMT2-206ENST00000553529 CYTH4Q9UIA0 394 aa19.11■□□□□ 0.65
SHMT2-206ENST00000553529 GMEB2Q9UKD1 530 aa19.11■□□□□ 0.65
SHMT2-206ENST00000553529 AGO1Q9UL18 857 aaKnown RBP19.11■□□□□ 0.65
SHMT2-206ENST00000553529 MMP17Q9ULZ9 603 aa19.11■□□□□ 0.65
SHMT2-206ENST00000553529 TBC1D3BA6NDS4 549 aa19.1■□□□□ 0.65
SHMT2-206ENST00000553529 BECN2A8MW95 431 aa19.1■□□□□ 0.65
SHMT2-206ENST00000553529 PMM2O15305 246 aa19.1■□□□□ 0.65
SHMT2-206ENST00000553529 APBB3O95704 486 aa19.1■□□□□ 0.65
SHMT2-206ENST00000553529 RALAP11233 206 aa19.1■□□□□ 0.65
SHMT2-206ENST00000553529 PPP1R2P41236 205 aa19.1■□□□□ 0.65
SHMT2-206ENST00000553529 GRIA2P42262 883 aa19.1■□□□□ 0.65
SHMT2-206ENST00000553529 PLA2G4AP47712 749 aa19.1■□□□□ 0.65
SHMT2-206ENST00000553529 SGSHP51688 502 aa19.1■□□□□ 0.65
SHMT2-206ENST00000553529 SF3A2Q15428 464 aaKnown RBP19.1■□□□□ 0.65
SHMT2-206ENST00000553529 CRY1Q16526 586 aa19.1■□□□□ 0.65
SHMT2-206ENST00000553529 PM20D1Q6GTS8 502 aa19.1■□□□□ 0.65
SHMT2-206ENST00000553529 TCEAL6Q6IPX3 200 aa19.1■□□□□ 0.65
SHMT2-206ENST00000553529 LCLAT1Q6UWP7 414 aa19.1■□□□□ 0.65
SHMT2-206ENST00000553529 TRIML1Q8N9V2 468 aa19.1■□□□□ 0.65
SHMT2-206ENST00000553529 TERB1Q8NA31 727 aa19.1■□□□□ 0.65
SHMT2-206ENST00000553529 SLC35F5Q8WV83 523 aa19.1■□□□□ 0.65
SHMT2-206ENST00000553529 TCEAL3Q969E4 200 aa19.1■□□□□ 0.65
SHMT2-206ENST00000553529 GTPBP4Q9BZE4 634 aaKnown RBP19.1■□□□□ 0.65
SHMT2-206ENST00000553529 MIS12Q9H081 205 aa19.1■□□□□ 0.65
SHMT2-206ENST00000553529 UBE2TQ9NPD8 197 aaPredicted RBP19.1■□□□□ 0.65
SHMT2-206ENST00000553529 LMBRD1Q9NUN5 540 aa19.1■□□□□ 0.65
SHMT2-206ENST00000553529 CLIC5Q9NZA1 410 aa19.1■□□□□ 0.65
SHMT2-206ENST00000553529 HESX1Q9UBX0 185 aa19.1■□□□□ 0.65
SHMT2-206ENST00000553529 RAD54BQ9Y620 910 aa19.1■□□□□ 0.65
SHMT2-206ENST00000553529 WASH3PC4AMC7 463 aa19.09■□□□□ 0.65
SHMT2-206ENST00000553529 CISD3P0C7P0 127 aa19.09■□□□□ 0.65
SHMT2-206ENST00000553529 KRT5P13647 590 aa19.09■□□□□ 0.65
SHMT2-206ENST00000553529 DAOAP59103 153 aa19.09■□□□□ 0.65
SHMT2-206ENST00000553529 FYB2Q5VWT5 728 aa19.09■□□□□ 0.65
SHMT2-206ENST00000553529 BSPRYQ5W0U4 402 aa19.09■□□□□ 0.65
SHMT2-206ENST00000553529 KLHDC10Q6PID8 442 aa19.09■□□□□ 0.65
SHMT2-206ENST00000553529 FOXR2Q6PJQ5 311 aa19.09■□□□□ 0.65
SHMT2-206ENST00000553529 RSRC2Q7L4I2 434 aaKnown RBP19.09■□□□□ 0.65
SHMT2-206ENST00000553529 FMNL3Q8IVF7 1028 aa19.09■□□□□ 0.65
SHMT2-206ENST00000553529 TTC39CQ8N584 583 aa19.09■□□□□ 0.65
SHMT2-206ENST00000553529 KIAA1958Q8N8K9 716 aa19.09■□□□□ 0.65
SHMT2-206ENST00000553529 ACDQ96AP0 544 aa19.09■□□□□ 0.65
SHMT2-206ENST00000553529 OTUB2Q96DC9 234 aa19.09■□□□□ 0.65
SHMT2-206ENST00000553529 UBXN6Q9BZV1 441 aa19.09■□□□□ 0.65
SHMT2-206ENST00000553529 DUSP15Q9H1R2 295 aaPredicted RBP19.09■□□□□ 0.65
SHMT2-206ENST00000553529 SEMA4GQ9NTN9 838 aa19.09■□□□□ 0.65
SHMT2-206ENST00000553529 DEC1Q9P2X7 70 aa19.09■□□□□ 0.65
SHMT2-206ENST00000553529 RAB23Q9ULC3 237 aa19.09■□□□□ 0.65
SHMT2-206ENST00000553529 SDK1Q7Z5N4 2213 aa19.08■□□□□ 0.65
SHMT2-206ENST00000553529 A0A0A0MRY4 1105 aa19.08■□□□□ 0.64
SHMT2-206ENST00000553529 CACNG3O60359 315 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms