RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 CSH2P0DML3 217 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 ACPPP15309 386 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 CES1P23141 567 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 P2RY2P41231 377 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 MATR3P43243 847 aaKnown RBP eCLIP7.82□□□□□ -1.16
ATXN3-219ENST00000553488 DHPSP49366 369 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-219ENST00000553488 TAF6P49848 677 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 LIG4P49917 911 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 ZNF131P52739 623 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 ZXDBP98169 803 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 MESP2Q0VG99 397 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 SEMA3BQ13214 749 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 CRY1Q16526 586 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 CCDC142Q17RM4 750 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 TMEM119Q4V9L6 283 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 ZC2HC1CQ53FD0 456 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-219ENST00000553488 USP39Q53GS9 565 aaKnown RBP7.82□□□□□ -1.16
ATXN3-219ENST00000553488 TRIM61Q5EBN2 209 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 ARSHQ5FYA8 562 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 SDHAF4Q5VUM1 108 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 CC2D1AQ6P1N0 951 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-219ENST00000553488 PROSER1Q86XN7 944 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 SFTPA1Q8IWL2 248 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 CD302Q8IX05 232 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 EFCAB13Q8IY85 973 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 PIGKQ92643 395 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 MRPS31Q92665 395 aaKnown RBP7.82□□□□□ -1.16
ATXN3-219ENST00000553488 BICD1Q96G01 975 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 FNBP1Q96RU3 617 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 PYM1Q9BRP8 204 aaKnown RBP7.82□□□□□ -1.16
ATXN3-219ENST00000553488 MSTO1Q9BUK6 570 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 MUC3BQ9H195 1237 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 TMEM74BQ9NUR3 256 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 DUS2Q9NX74 493 aaKnown RBP7.82□□□□□ -1.16
ATXN3-219ENST00000553488 KCND2Q9NZV8 630 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 GCNT4Q9P109 453 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 KCNG1Q9UIX4 513 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 FOXD3Q9UJU5 478 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-219ENST00000553488 NOL7Q9UMY1 257 aaKnown RBP7.82□□□□□ -1.16
ATXN3-219ENST00000553488 C2CD2Q9Y426 696 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 PCDHB5Q9Y5E4 795 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 MYH10P35580 1976 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 ATMQ13315 3056 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 ATXN2Q99700 1313 aaKnown RBP7.81□□□□□ -1.16
ATXN3-219ENST00000553488 URB1O60287 2271 aaKnown RBP7.81□□□□□ -1.16
ATXN3-219ENST00000553488 TP53BP1Q12888 1972 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-219ENST00000553488 SPAARA0A1B0GVQ0 90 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 C2orf78A6NCI8 922 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 TISP43B9A030 160 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 H0YCG3 227 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 K7ENM7 598 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 LAD1O00515 517 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 EREGO14944 169 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 CKMP06732 381 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 PLA2G4BP0C869 781 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 ENGP17813 658 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 PTGER3P43115 390 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 IFNAR2P48551 515 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 FAM193AP78312 1265 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 LMAN2Q12907 356 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 PSMD2Q13200 908 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 TAF12Q16514 161 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 DDR2Q16832 855 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 UAP1L1Q3KQV9 507 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 C2orf27AQ580R0 203 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 SLC23A3Q6PIS1 610 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 CCDC83Q8IWF9 413 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 DCP1BQ8IZD4 617 aaKnown RBP7.81□□□□□ -1.16
ATXN3-219ENST00000553488 FRMD1Q8N878 549 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 SH3RF2Q8TEC5 729 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 RLN3Q8WXF3 142 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 EXOC4Q96A65 974 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 CYP2S1Q96SQ9 504 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 REEP2Q9BRK0 252 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 PI4K2AQ9BTU6 479 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 LINC00597Q9H2U6 94 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 ASB7Q9H672 318 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 ABCB6Q9NP58 842 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 LARSQ9P2J5 1176 aaKnown RBP7.81□□□□□ -1.16
ATXN3-219ENST00000553488 MBD1Q9UIS9 605 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-219ENST00000553488 ODF2LQ9ULJ1 636 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 L1RE1Q9UN81 338 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 ARHGAP26Q9UNA1 814 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 MAGED2Q9UNF1 606 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-219ENST00000553488 TENM4Q6N022 2769 aa7.81□□□□□ -1.16
ATXN3-219ENST00000553488 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 TRAV19A0A0A6YYK7 116 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 KPNA7A9QM74 516 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 ANKRD63C9JTQ0 380 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 SGK1O00141 431 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 PRPF40AO75400 957 aaKnown RBP7.8□□□□□ -1.16
ATXN3-219ENST00000553488 NFATC1O95644 943 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 CYP17A1P05093 508 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 USP17L7P0C7H9 530 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 SCP2P22307 547 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 CYP2F1P24903 491 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 MAPK8P45983 427 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 ACOT2P49753 483 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 NEK4P51957 841 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 SIM1P81133 766 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms