RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 TEX28O15482 410 aa18.32■□□□□ 0.52
PSEN1-206ENST00000553447 PGFP49763 221 aa18.32■□□□□ 0.52
PSEN1-206ENST00000553447 NME3Q13232 169 aa18.32■□□□□ 0.52
PSEN1-206ENST00000553447 MTMR3Q13615 1198 aa18.32■□□□□ 0.52
PSEN1-206ENST00000553447 SHHQ15465 462 aa18.32■□□□□ 0.52
PSEN1-206ENST00000553447 ERMARDQ5T6L9 678 aa18.32■□□□□ 0.52
PSEN1-206ENST00000553447 CCDC70Q6NSX1 233 aa18.32■□□□□ 0.52
PSEN1-206ENST00000553447 TAC4Q86UU9 113 aa18.32■□□□□ 0.52
PSEN1-206ENST00000553447 FAM131BQ86XD5 332 aa18.32■□□□□ 0.52
PSEN1-206ENST00000553447 GPR161Q8N6U8 529 aaKnown RBP18.32■□□□□ 0.52
PSEN1-206ENST00000553447 CCDC185Q8N715 623 aa18.32■□□□□ 0.52
PSEN1-206ENST00000553447 PRELID2Q8N945 189 aa18.32■□□□□ 0.52
PSEN1-206ENST00000553447 ADAM32Q8TC27 787 aa18.32■□□□□ 0.52
PSEN1-206ENST00000553447 DQX1Q8TE96 717 aaKnown RBP18.32■□□□□ 0.52
PSEN1-206ENST00000553447 GIPC2Q8TF65 315 aa18.32■□□□□ 0.52
PSEN1-206ENST00000553447 FBXO32Q969P5 355 aa18.32■□□□□ 0.52
PSEN1-206ENST00000553447 DDX47Q9H0S4 455 aaKnown RBP18.32■□□□□ 0.52
PSEN1-206ENST00000553447 EPC1Q9H2F5 836 aa18.32■□□□□ 0.52
PSEN1-206ENST00000553447 FAM204AQ9H8W3 233 aa18.32■□□□□ 0.52
PSEN1-206ENST00000553447 ANKZF1Q9H8Y5 726 aa18.32■□□□□ 0.52
PSEN1-206ENST00000553447 CYP4F11Q9HBI6 524 aa18.32■□□□□ 0.52
PSEN1-206ENST00000553447 PIGVQ9NUD9 493 aa18.32■□□□□ 0.52
PSEN1-206ENST00000553447 GPATCH2LQ9NWQ4 482 aa18.32■□□□□ 0.52
PSEN1-206ENST00000553447 MAFFQ9ULX9 164 aa18.32■□□□□ 0.52
PSEN1-206ENST00000553447 EFR3BQ9Y2G0 817 aa18.32■□□□□ 0.52
PSEN1-206ENST00000553447 SYNJ2BP-COX16A0A087WUM0 186 aa18.31■□□□□ 0.52
PSEN1-206ENST00000553447 GRXCR1A8MXD5 290 aa18.31■□□□□ 0.52
PSEN1-206ENST00000553447 C5orf67F2Z3F1 127 aa18.31■□□□□ 0.52
PSEN1-206ENST00000553447 DYNC1I1O14576 645 aa18.31■□□□□ 0.52
PSEN1-206ENST00000553447 PHF2O75151 1096 aa18.31■□□□□ 0.52
PSEN1-206ENST00000553447 CXCL14O95715 111 aa18.31■□□□□ 0.52
PSEN1-206ENST00000553447 F9P00740 461 aa18.31■□□□□ 0.52
PSEN1-206ENST00000553447 CD48P09326 243 aa18.31■□□□□ 0.52
PSEN1-206ENST00000553447 CNPP09543 421 aaKnown RBP18.31■□□□□ 0.52
PSEN1-206ENST00000553447 KRT10P13645 584 aa18.31■□□□□ 0.52
PSEN1-206ENST00000553447 MYOGP15173 224 aa18.31■□□□□ 0.52
PSEN1-206ENST00000553447 CA8P35219 290 aa18.31■□□□□ 0.52
PSEN1-206ENST00000553447 CDH6P55285 790 aa18.31■□□□□ 0.52
PSEN1-206ENST00000553447 KRT81Q14533 505 aa18.31■□□□□ 0.52
PSEN1-206ENST00000553447 PDK2Q15119 407 aa18.31■□□□□ 0.52
PSEN1-206ENST00000553447 CYP1B1Q16678 543 aa18.31■□□□□ 0.52
PSEN1-206ENST00000553447 GLE1Q53GS7 698 aaKnown RBP18.31■□□□□ 0.52
PSEN1-206ENST00000553447 ZC3H12AQ5D1E8 599 aaKnown RBP18.31■□□□□ 0.52
PSEN1-206ENST00000553447 KAZNQ674X7 775 aa18.31■□□□□ 0.52
PSEN1-206ENST00000553447 C8orf74Q6P047 294 aa18.31■□□□□ 0.52
PSEN1-206ENST00000553447 PSTKQ8IV42 348 aaKnown RBP18.31■□□□□ 0.52
PSEN1-206ENST00000553447 C12orf50Q8NA57 414 aaPredicted RBP18.31■□□□□ 0.52
PSEN1-206ENST00000553447 FAM71BQ8TC56 605 aa18.31■□□□□ 0.52
PSEN1-206ENST00000553447 C17orf80Q9BSJ5 609 aa18.31■□□□□ 0.52
PSEN1-206ENST00000553447 LRRC1Q9BTT6 524 aa18.31■□□□□ 0.52
PSEN1-206ENST00000553447 TTLL2Q9BWV7 592 aa18.31■□□□□ 0.52
PSEN1-206ENST00000553447 SLITRK6Q9H5Y7 841 aa18.31■□□□□ 0.52
PSEN1-206ENST00000553447 WDR6Q9NNW5 1121 aaKnown RBP18.31■□□□□ 0.52
PSEN1-206ENST00000553447 DDIT4Q9NX09 232 aa18.31■□□□□ 0.52
PSEN1-206ENST00000553447 OSER1Q9NX31 292 aa18.31■□□□□ 0.52
PSEN1-206ENST00000553447 COX16Q9P0S2 106 aa18.31■□□□□ 0.52
PSEN1-206ENST00000553447 FZD10Q9ULW2 581 aa18.31■□□□□ 0.52
PSEN1-206ENST00000553447 AP4E1Q9UPM8 1137 aa18.31■□□□□ 0.52
PSEN1-206ENST00000553447 YIPF1Q9Y548 306 aa18.31■□□□□ 0.52
PSEN1-206ENST00000553447 MTCL1Q9Y4B5 1905 aaKnown RBP18.31■□□□□ 0.52
PSEN1-206ENST00000553447 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.3■□□□□ 0.52
PSEN1-206ENST00000553447 ARHGEF15O94989 841 aa18.3■□□□□ 0.52
PSEN1-206ENST00000553447 TJP3O95049 919 aa18.3■□□□□ 0.52
PSEN1-206ENST00000553447 IGLV3-25P01717 112 aa18.3■□□□□ 0.52
PSEN1-206ENST00000553447 ELF1P32519 619 aa18.3■□□□□ 0.52
PSEN1-206ENST00000553447 PSEN1P49768 467 aa18.3■□□□□ 0.52
PSEN1-206ENST00000553447 UBE3AQ05086 875 aa18.3■□□□□ 0.52
PSEN1-206ENST00000553447 TAF10Q12962 218 aa18.3■□□□□ 0.52
PSEN1-206ENST00000553447 DPYSL3Q14195 570 aa18.3■□□□□ 0.52
PSEN1-206ENST00000553447 CA9Q16790 459 aa18.3■□□□□ 0.52
PSEN1-206ENST00000553447 FAM109BQ6ICB4 259 aaPredicted RBP18.3■□□□□ 0.52
PSEN1-206ENST00000553447 TMC7Q7Z402 723 aa18.3■□□□□ 0.52
PSEN1-206ENST00000553447 VSIG1Q86XK7 387 aa18.3■□□□□ 0.52
PSEN1-206ENST00000553447 MAP7D3Q8IWC1 876 aa18.3■□□□□ 0.52
PSEN1-206ENST00000553447 TCEAL8Q8IYN2 117 aa18.3■□□□□ 0.52
PSEN1-206ENST00000553447 SPPL3Q8TCT6 385 aa18.3■□□□□ 0.52
PSEN1-206ENST00000553447 RNF139Q8WU17 664 aa18.3■□□□□ 0.52
PSEN1-206ENST00000553447 MAGOHBQ96A72 148 aaKnown RBP18.3■□□□□ 0.52
PSEN1-206ENST00000553447 TCF25Q9BQ70 676 aa18.3■□□□□ 0.52
PSEN1-206ENST00000553447 CALN1Q9BXU9 219 aa18.3■□□□□ 0.52
PSEN1-206ENST00000553447 SMOC2Q9H3U7 446 aa18.3■□□□□ 0.52
PSEN1-206ENST00000553447 PCDH18Q9HCL0 1135 aa18.3■□□□□ 0.52
PSEN1-206ENST00000553447 ALG13Q9NP73 1137 aaKnown RBP18.3■□□□□ 0.52
PSEN1-206ENST00000553447 TLR8Q9NR97 1041 aaKnown RBP18.3■□□□□ 0.52
PSEN1-206ENST00000553447 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.3■□□□□ 0.52
PSEN1-206ENST00000553447 TARSL2A2RTX5 802 aaKnown RBP18.29■□□□□ 0.52
PSEN1-206ENST00000553447 PRRG1O14668 218 aa18.29■□□□□ 0.52
PSEN1-206ENST00000553447 RB1P06400 928 aa18.29■□□□□ 0.52
PSEN1-206ENST00000553447 L1CAMP32004 1257 aa18.29■□□□□ 0.52
PSEN1-206ENST00000553447 CHRNA3P32297 505 aa18.29■□□□□ 0.52
PSEN1-206ENST00000553447 GBP1P32455 592 aa18.29■□□□□ 0.52
PSEN1-206ENST00000553447 ALDH1A3P47895 512 aa18.29■□□□□ 0.52
PSEN1-206ENST00000553447 CXCR3P49682 368 aa18.29■□□□□ 0.52
PSEN1-206ENST00000553447 AIF1P55008 147 aa18.29■□□□□ 0.52
PSEN1-206ENST00000553447 ERVFC1P60507 584 aa18.29■□□□□ 0.52
PSEN1-206ENST00000553447 ADCY2Q08462 1091 aa18.29■□□□□ 0.52
PSEN1-206ENST00000553447 DPYSL2Q16555 572 aa18.29■□□□□ 0.52
PSEN1-206ENST00000553447 MSANTD2Q6P1R3 559 aa18.29■□□□□ 0.52
PSEN1-206ENST00000553447 SND1Q7KZF4 910 aaKnown RBP eCLIP18.29■□□□□ 0.52
PSEN1-206ENST00000553447 POF1BQ8WVV4 589 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms