RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 E2F5Q15329 346 aa9.19□□□□□ -0.94
TMEM116-217ENST00000552801 DUOXA1Q1HG43 343 aa9.19□□□□□ -0.94
TMEM116-217ENST00000552801 SGSM1Q2NKQ1 1148 aa9.19□□□□□ -0.94
TMEM116-217ENST00000552801 SYCP2LQ5T4T6 812 aa9.19□□□□□ -0.94
TMEM116-217ENST00000552801 EMC10Q5UCC4 262 aa9.19□□□□□ -0.94
TMEM116-217ENST00000552801 CEP135Q66GS9 1140 aa9.19□□□□□ -0.94
TMEM116-217ENST00000552801 SCARA3Q6AZY7 606 aa9.19□□□□□ -0.94
TMEM116-217ENST00000552801 LIMS2Q7Z4I7 341 aa9.19□□□□□ -0.94
TMEM116-217ENST00000552801 ACOT1Q86TX2 421 aa9.19□□□□□ -0.94
TMEM116-217ENST00000552801 DEFB124Q8NES8 71 aa9.19□□□□□ -0.94
TMEM116-217ENST00000552801 JAKMIP2Q96AA8 810 aa9.19□□□□□ -0.94
TMEM116-217ENST00000552801 KCNK16Q96T55 309 aa9.19□□□□□ -0.94
TMEM116-217ENST00000552801 BBS2Q9BXC9 721 aa9.19□□□□□ -0.94
TMEM116-217ENST00000552801 CCSER2Q9H7U1 834 aa9.19□□□□□ -0.94
TMEM116-217ENST00000552801 SPHK2Q9NRA0 654 aa9.19□□□□□ -0.94
TMEM116-217ENST00000552801 GMIPQ9P107 970 aa9.19□□□□□ -0.94
TMEM116-217ENST00000552801 EVLQ9UI08 416 aaPredicted RBP9.19□□□□□ -0.94
TMEM116-217ENST00000552801 PCDHB9Q9Y5E1 797 aa9.19□□□□□ -0.94
TMEM116-217ENST00000552801 CEP192Q8TEP8 1941 aa9.18□□□□□ -0.94
TMEM116-217ENST00000552801 ATXN2Q99700 1313 aaKnown RBP9.18□□□□□ -0.94
TMEM116-217ENST00000552801 TMEM8BA6NDV4 472 aa9.18□□□□□ -0.94
TMEM116-217ENST00000552801 CALUO43852 315 aaPredicted RBP9.18□□□□□ -0.94
TMEM116-217ENST00000552801 OPHN1O60890 802 aa9.18□□□□□ -0.94
TMEM116-217ENST00000552801 RPN1P04843 607 aaKnown RBP9.18□□□□□ -0.94
TMEM116-217ENST00000552801 KRT13P13646 458 aa9.18□□□□□ -0.94
TMEM116-217ENST00000552801 ENGP17813 658 aa9.18□□□□□ -0.94
TMEM116-217ENST00000552801 ADORA2BP29275 332 aa9.18□□□□□ -0.94
TMEM116-217ENST00000552801 WASP42768 502 aa9.18□□□□□ -0.94
TMEM116-217ENST00000552801 CASP4P49662 377 aa9.18□□□□□ -0.94
TMEM116-217ENST00000552801 CACNA2D1P54289 1103 aa9.18□□□□□ -0.94
TMEM116-217ENST00000552801 MAP3K7CLP57077 242 aa9.18□□□□□ -0.94
TMEM116-217ENST00000552801 SLC8A3P57103 927 aa9.18□□□□□ -0.94
TMEM116-217ENST00000552801 ZXDBP98169 803 aa9.18□□□□□ -0.94
TMEM116-217ENST00000552801 ARID5AQ03989 594 aa9.18□□□□□ -0.94
TMEM116-217ENST00000552801 STARD3Q14849 445 aa9.18□□□□□ -0.94
TMEM116-217ENST00000552801 KIAA1211LQ6NV74 962 aa9.18□□□□□ -0.94
TMEM116-217ENST00000552801 CNNM4Q6P4Q7 775 aa9.18□□□□□ -0.94
TMEM116-217ENST00000552801 KIAA1324Q6UXG2 1013 aaKnown RBP9.18□□□□□ -0.94
TMEM116-217ENST00000552801 TPGS1Q6ZTW0 290 aa9.18□□□□□ -0.94
TMEM116-217ENST00000552801 EPM2AIP1Q7L775 607 aaPredicted RBP9.18□□□□□ -0.94
TMEM116-217ENST00000552801 C12orf40Q86WS4 652 aa9.18□□□□□ -0.94
TMEM116-217ENST00000552801 BBS7Q8IWZ6 715 aa9.18□□□□□ -0.94
TMEM116-217ENST00000552801 DEFB119Q8N690 84 aa9.18□□□□□ -0.94
TMEM116-217ENST00000552801 TERB1Q8NA31 727 aa9.18□□□□□ -0.94
TMEM116-217ENST00000552801 SCAMP5Q8TAC9 235 aa9.18□□□□□ -0.94
TMEM116-217ENST00000552801 GPT2Q8TD30 523 aa9.18□□□□□ -0.94
TMEM116-217ENST00000552801 SLC2A14Q8TDB8 520 aa9.18□□□□□ -0.94
TMEM116-217ENST00000552801 UCMAQ8WVF2 138 aa9.18□□□□□ -0.94
TMEM116-217ENST00000552801 TAF4BQ92750 862 aa9.18□□□□□ -0.94
TMEM116-217ENST00000552801 ZDHHC4Q9NPG8 344 aa9.18□□□□□ -0.94
TMEM116-217ENST00000552801 FAM49BQ9NUQ9 324 aa9.18□□□□□ -0.94
TMEM116-217ENST00000552801 SLC6A14Q9UN76 642 aa9.18□□□□□ -0.94
TMEM116-217ENST00000552801 CNOT1A5YKK6 2376 aaKnown RBP9.18□□□□□ -0.94
TMEM116-217ENST00000552801 HOXC11O43248 304 aaPredicted RBP9.17□□□□□ -0.94
TMEM116-217ENST00000552801 SYNCRIPO60506 623 aaKnown RBP9.17□□□□□ -0.94
TMEM116-217ENST00000552801 RALAP11233 206 aa9.17□□□□□ -0.94
TMEM116-217ENST00000552801 CCDC130P13994 396 aa9.17□□□□□ -0.94
TMEM116-217ENST00000552801 TYRP14679 529 aa9.17□□□□□ -0.94
TMEM116-217ENST00000552801 HOXD13P35453 343 aa9.17□□□□□ -0.94
TMEM116-217ENST00000552801 PTGER3P43115 390 aa9.17□□□□□ -0.94
TMEM116-217ENST00000552801 SIM1P81133 766 aaPredicted RBP9.17□□□□□ -0.94
TMEM116-217ENST00000552801 C10orf120Q5SQS8 335 aa9.17□□□□□ -0.94
TMEM116-217ENST00000552801 RSRC2Q7L4I2 434 aaKnown RBP9.17□□□□□ -0.94
TMEM116-217ENST00000552801 UNC93AQ86WB7 457 aa9.17□□□□□ -0.94
TMEM116-217ENST00000552801 C12orf56Q8IXR9 622 aa9.17□□□□□ -0.94
TMEM116-217ENST00000552801 OLIG1Q8TAK6 271 aa9.17□□□□□ -0.94
TMEM116-217ENST00000552801 CCDC34Q96HJ3 373 aa9.17□□□□□ -0.94
TMEM116-217ENST00000552801 CDK5RAP1Q96SZ6 601 aaKnown RBP9.17□□□□□ -0.94
TMEM116-217ENST00000552801 CALCOCO1Q9P1Z2 691 aa9.17□□□□□ -0.94
TMEM116-217ENST00000552801 SUSD2Q9UGT4 822 aa9.17□□□□□ -0.94
TMEM116-217ENST00000552801 DNMT3LQ9UJW3 386 aa9.17□□□□□ -0.94
TMEM116-217ENST00000552801 NAGPAQ9UK23 515 aa9.17□□□□□ -0.94
TMEM116-217ENST00000552801 CYP8B1Q9UNU6 501 aa9.17□□□□□ -0.94
TMEM116-217ENST00000552801 MAP1BP46821 2468 aaKnown RBP9.16□□□□□ -0.94
TMEM116-217ENST00000552801 A0A0A0MRY4 1105 aa9.16□□□□□ -0.94
TMEM116-217ENST00000552801 LRRIQ3A6PVS8 624 aaPredicted RBP9.16□□□□□ -0.94
TMEM116-217ENST00000552801 MEI4A8MW99 385 aa9.16□□□□□ -0.94
TMEM116-217ENST00000552801 C1QTNF9BB2RNN3 333 aa9.16□□□□□ -0.94
TMEM116-217ENST00000552801 H0Y626 953 aa9.16□□□□□ -0.94
TMEM116-217ENST00000552801 TRIM16O95361 564 aa9.16□□□□□ -0.94
TMEM116-217ENST00000552801 NR3C1P04150 777 aa9.16□□□□□ -0.94
TMEM116-217ENST00000552801 CYBBP04839 570 aa9.16□□□□□ -0.94
TMEM116-217ENST00000552801 C1QTNF9P0C862 333 aa9.16□□□□□ -0.94
TMEM116-217ENST00000552801 SPINK2P20155 84 aa9.16□□□□□ -0.94
TMEM116-217ENST00000552801 ACO1P21399 889 aaKnown RBP9.16□□□□□ -0.94
TMEM116-217ENST00000552801 ITPKAP23677 461 aa9.16□□□□□ -0.94
TMEM116-217ENST00000552801 CASP1P29466 404 aa9.16□□□□□ -0.94
TMEM116-217ENST00000552801 GGCXP38435 758 aa9.16□□□□□ -0.94
TMEM116-217ENST00000552801 KIR2DL1P43626 348 aaPredicted RBP9.16□□□□□ -0.94
TMEM116-217ENST00000552801 PLA2G4AP47712 749 aa9.16□□□□□ -0.94
TMEM116-217ENST00000552801 DGKGP49619 791 aa9.16□□□□□ -0.94
TMEM116-217ENST00000552801 NDST1P52848 882 aa9.16□□□□□ -0.94
TMEM116-217ENST00000552801 ZNF33AQ06730 810 aa9.16□□□□□ -0.94
TMEM116-217ENST00000552801 ORC1Q13415 861 aa9.16□□□□□ -0.94
TMEM116-217ENST00000552801 CUL4BQ13620 913 aa9.16□□□□□ -0.94
TMEM116-217ENST00000552801 HNRNPDQ14103 355 aaKnown RBP9.16□□□□□ -0.94
TMEM116-217ENST00000552801 BMT2Q1RMZ1 405 aa9.16□□□□□ -0.94
TMEM116-217ENST00000552801 GAB4Q2WGN9 574 aa9.16□□□□□ -0.94
TMEM116-217ENST00000552801 MAP7D1Q3KQU3 841 aa9.16□□□□□ -0.94
TMEM116-217ENST00000552801 PLEKHG6Q3KR16 790 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms