RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	RSPO2	Q6UXX9	243 aa	Predicted RBP	13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	OTOP2	Q7RTS6	562 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	TMCO2	Q7Z6W1	182 aa	Predicted RBP	13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	NUP93	Q8N1F7	819 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	CCDC185	Q8N715	623 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	FBXO22	Q8NEZ5	403 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	SCAMP5	Q8TAC9	235 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	SLC7A14	Q8TBB6	771 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	IFT81	Q8WYA0	676 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	RIN2	Q8WYP3	895 aa	Predicted RBP	13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	FAF2	Q96CS3	445 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	PGLYRP2	Q96PD5	576 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	SLC9A7	Q96T83	725 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	YME1L1	Q96TA2	773 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	MAK16	Q9BXY0	300 aa	Known RBP	13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	COMMD8	Q9NX08	183 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	SPG21	Q9NZD8	308 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	FZD10	Q9ULW2	581 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	SCML2	Q9UQR0	700 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	CDY1	Q9Y6F8	540 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	PLXNA3	P51805	1871 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	ZBBX	A8MT70	800 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	APOC4-APOC2	K7ER74	178 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	VNN2	O95498	520 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	GAS8	O95995	478 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	F9	P00740	461 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	APOC2	P02655	101 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	HAPLN1	P10915	354 aa	Predicted RBP	13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	L1CAM	P32004	1257 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	GPR15	P49685	360 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	VCP	P55072	806 aa	Known RBP	13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	YWHAG	P61981	247 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	DYNLT1	P63172	113 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	KRT17	Q04695	432 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	MMRN1	Q13201	1228 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	PTK6	Q13882	451 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	PPP1R7	Q15435	360 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	DDR2	Q16832	855 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	ANKRD20A8P	Q5CZ79	823 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	RNF19B	Q6ZMZ0	732 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	C16orf59	Q7L2K0	433 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	HDX	Q7Z353	690 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	FAM131B	Q86XD5	332 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	ARHGAP18	Q8N392	663 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	ATAD1	Q8NBU5	361 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	BAD	Q92934	168 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	NKD2	Q969F2	451 aa	Predicted RBP	13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	CAVIN3	Q969G5	261 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	NTAN1	Q96AB6	310 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	TMEM169	Q96HH4	297 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	SPATA17	Q96L03	361 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	CCDC114	Q96M63	670 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	RNF157	Q96PX1	679 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	KCTD15	Q96SI1	283 aa	Predicted RBP	13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	DPH5	Q9H2P9	285 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	FBXO44	Q9H4M3	255 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	DHX35	Q9H5Z1	703 aa	Known RBP	13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	FAM204A	Q9H8W3	233 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	ABCC13	Q9NSE7	274 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	PIGV	Q9NUD9	493 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	IL37	Q9NZH6	218 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	RCOR3	Q9P2K3	495 aa	Predicted RBP	13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	NFU1	Q9UMS0	254 aa		13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	DRG1	Q9Y295	367 aa	Known RBP	13.21	□□□□□ -0.29
CACNB3-223	ENST00000552480	MYO16	Q9Y6X6	1858 aa		13.21	□□□□□ -0.3
CACNB3-223	ENST00000552480	KIAA1671	Q9BY89	1806 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	SYNJ2BP-COX16	A0A087WUM0	186 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	APOL1	O14791	398 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	DAPK3	O43293	454 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	RTN3	O95197	1032 aa	Predicted RBP	13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	TGM2	P21980	687 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	IL4R	P24394	825 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	ECHS1	P30084	290 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	PPM1A	P35813	382 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	TNNT3	P45378	269 aa	Predicted RBP	13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	GLUD2	P49448	558 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	RPL10A	P62906	217 aa	Known RBP	13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	HTRA4	P83105	476 aa	Predicted RBP	13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	OTUD4	Q01804	1114 aa	Known RBP	13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	ROR1	Q01973	937 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	DSG1	Q02413	1049 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	SCAP	Q12770	1279 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	IFRD2	Q12894	506 aa	Predicted RBP	13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	NME3	Q13232	169 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	BYSL	Q13895	437 aa	Known RBP	13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	HLTF	Q14527	1009 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	TRADD	Q15628	312 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	EFHC2	Q5JST6	749 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	SDHAF4	Q5VUM1	108 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	BTBD8	Q5XKL5	378 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	SLC9A4	Q6AI14	798 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	KIAA1841	Q6NSI8	718 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	PSRC1	Q6PGN9	363 aa	Predicted RBP	13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	ZNF365	Q70YC5	407 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	DDX53	Q86TM3	631 aa	Known RBP	13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	TTC9B	Q8N6N2	239 aa		13.2	□□□□□ -0.3
CACNB3-223	ENST00000552480	SLC35B2	Q8TB61	432 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms