RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 TRIM21P19474 475 aaKnown RBP13.68□□□□□ -0.22
NPAS3-209ENST00000551008 PI4KAP42356 2102 aa13.68□□□□□ -0.22
NPAS3-209ENST00000551008 PLA2G4AP47712 749 aa13.68□□□□□ -0.22
NPAS3-209ENST00000551008 PSEN1P49768 467 aa13.68□□□□□ -0.22
NPAS3-209ENST00000551008 TKTL1P51854 596 aa13.68□□□□□ -0.22
NPAS3-209ENST00000551008 APBA1Q02410 837 aa13.68□□□□□ -0.22
NPAS3-209ENST00000551008 GAD2Q05329 585 aa13.68□□□□□ -0.22
NPAS3-209ENST00000551008 SPEM2Q0P670 501 aa13.68□□□□□ -0.22
NPAS3-209ENST00000551008 ADIGQ0VDE8 80 aa13.68□□□□□ -0.22
NPAS3-209ENST00000551008 BST2Q10589 180 aaKnown RBP13.68□□□□□ -0.22
NPAS3-209ENST00000551008 TMEM270Q6UE05 265 aa13.68□□□□□ -0.22
NPAS3-209ENST00000551008 LCLAT1Q6UWP7 414 aa13.68□□□□□ -0.22
NPAS3-209ENST00000551008 TOGARAM2Q6ZUX3 1019 aa13.68□□□□□ -0.22
NPAS3-209ENST00000551008 RRAGAQ7L523 313 aa13.68□□□□□ -0.22
NPAS3-209ENST00000551008 RASSF3Q86WH2 238 aa13.68□□□□□ -0.22
NPAS3-209ENST00000551008 PPM1KQ8N3J5 372 aa13.68□□□□□ -0.22
NPAS3-209ENST00000551008 ALLCQ8N6M5 410 aa13.68□□□□□ -0.22
NPAS3-209ENST00000551008 TERB1Q8NA31 727 aa13.68□□□□□ -0.22
NPAS3-209ENST00000551008 EHBP1Q8NDI1 1231 aa13.68□□□□□ -0.22
NPAS3-209ENST00000551008 SLC35F5Q8WV83 523 aa13.68□□□□□ -0.22
NPAS3-209ENST00000551008 ACDQ96AP0 544 aa13.68□□□□□ -0.22
NPAS3-209ENST00000551008 NACA2Q9H009 215 aa13.68□□□□□ -0.22
NPAS3-209ENST00000551008 INTS2Q9H0H0 1204 aaKnown RBP13.68□□□□□ -0.22
NPAS3-209ENST00000551008 CD248Q9HCU0 757 aa13.68□□□□□ -0.22
NPAS3-209ENST00000551008 DLL3Q9NYJ7 618 aa13.68□□□□□ -0.22
NPAS3-209ENST00000551008 EBF1Q9UH73 591 aa13.68□□□□□ -0.22
NPAS3-209ENST00000551008 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.68□□□□□ -0.22
NPAS3-209ENST00000551008 CNTN6Q9UQ52 1028 aa13.68□□□□□ -0.22
NPAS3-209ENST00000551008 CNOT1A5YKK6 2376 aaKnown RBP13.68□□□□□ -0.22
NPAS3-209ENST00000551008 YJEFN3A6XGL0 299 aa13.67□□□□□ -0.22
NPAS3-209ENST00000551008 E7ENQ6 273 aa13.67□□□□□ -0.22
NPAS3-209ENST00000551008 AXIN1O15169 862 aa13.67□□□□□ -0.22
NPAS3-209ENST00000551008 RPP40O75818 363 aaKnown RBP13.67□□□□□ -0.22
NPAS3-209ENST00000551008 APBB3O95704 486 aa13.67□□□□□ -0.22
NPAS3-209ENST00000551008 AFPP02771 609 aaKnown RBP13.67□□□□□ -0.22
NPAS3-209ENST00000551008 APODP05090 189 aa13.67□□□□□ -0.22
NPAS3-209ENST00000551008 PAEPP09466 180 aa13.67□□□□□ -0.22
NPAS3-209ENST00000551008 CISD3P0C7P0 127 aa13.67□□□□□ -0.22
NPAS3-209ENST00000551008 TIE1P35590 1138 aa13.67□□□□□ -0.22
NPAS3-209ENST00000551008 GRIA2P42262 883 aa13.67□□□□□ -0.22
NPAS3-209ENST00000551008 ID4P47928 161 aa13.67□□□□□ -0.22
NPAS3-209ENST00000551008 YWHAGP61981 247 aaKnown RBP eCLIP13.67□□□□□ -0.22
NPAS3-209ENST00000551008 MRPS21P82921 87 aaKnown RBP13.67□□□□□ -0.22
NPAS3-209ENST00000551008 GCNT1Q02742 428 aa13.67□□□□□ -0.22
NPAS3-209ENST00000551008 EFEMP1Q12805 493 aa13.67□□□□□ -0.22
NPAS3-209ENST00000551008 CRY1Q16526 586 aa13.67□□□□□ -0.22
NPAS3-209ENST00000551008 PMF1Q6P1K2 205 aa13.67□□□□□ -0.22
NPAS3-209ENST00000551008 GJB7Q6PEY0 223 aa13.67□□□□□ -0.22
NPAS3-209ENST00000551008 TXNDC5Q8NBS9 432 aaKnown RBP13.67□□□□□ -0.22
NPAS3-209ENST00000551008 RBBP8NLQ8NC74 664 aaPredicted RBP13.67□□□□□ -0.22
NPAS3-209ENST00000551008 MDGA1Q8NFP4 955 aa13.67□□□□□ -0.22
NPAS3-209ENST00000551008 KCTD13Q8WZ19 329 aa13.67□□□□□ -0.22
NPAS3-209ENST00000551008 EXOC4Q96A65 974 aa13.67□□□□□ -0.22
NPAS3-209ENST00000551008 CNOT6LQ96LI5 555 aaKnown RBP13.67□□□□□ -0.22
NPAS3-209ENST00000551008 CLSTN2Q9H4D0 955 aa13.67□□□□□ -0.22
NPAS3-209ENST00000551008 RWDD2AQ9UIY3 292 aa13.67□□□□□ -0.22
NPAS3-209ENST00000551008 RASAL2Q9UJF2 1139 aa13.67□□□□□ -0.22
NPAS3-209ENST00000551008 AJAP1Q9UKB5 411 aaPredicted RBP13.67□□□□□ -0.22
NPAS3-209ENST00000551008 PCDHB4Q9Y5E5 795 aa13.67□□□□□ -0.22
NPAS3-209ENST00000551008 PRRT4C9JH25 899 aa13.66□□□□□ -0.22
NPAS3-209ENST00000551008 NEDD8-MDP1E9PL57 170 aa13.66□□□□□ -0.22
NPAS3-209ENST00000551008 GFRA2O00451 464 aa13.66□□□□□ -0.22
NPAS3-209ENST00000551008 KLF8O95600 359 aaPredicted RBP13.66□□□□□ -0.22
NPAS3-209ENST00000551008 GNA14O95837 355 aa13.66□□□□□ -0.22
NPAS3-209ENST00000551008 ZBED1O96006 694 aa13.66□□□□□ -0.22
NPAS3-209ENST00000551008 SETSIPP0DME0 302 aa13.66□□□□□ -0.22
NPAS3-209ENST00000551008 TYRP14679 529 aa13.66□□□□□ -0.22
NPAS3-209ENST00000551008 TNFRSF4P43489 277 aa13.66□□□□□ -0.22
NPAS3-209ENST00000551008 RGS7P49802 495 aa13.66□□□□□ -0.22
NPAS3-209ENST00000551008 DAOAP59103 153 aa13.66□□□□□ -0.22
NPAS3-209ENST00000551008 YWHAEP62258 255 aaKnown RBP13.66□□□□□ -0.22
NPAS3-209ENST00000551008 CNGA2Q16280 664 aa13.66□□□□□ -0.22
NPAS3-209ENST00000551008 ANO4Q32M45 955 aa13.66□□□□□ -0.22
NPAS3-209ENST00000551008 PLK5Q496M5 336 aa13.66□□□□□ -0.22
NPAS3-209ENST00000551008 CLEC17AQ6ZS10 378 aa13.66□□□□□ -0.22
NPAS3-209ENST00000551008 TPGS1Q6ZTW0 290 aa13.66□□□□□ -0.22
NPAS3-209ENST00000551008 FAM217AQ8IXS0 508 aa13.66□□□□□ -0.22
NPAS3-209ENST00000551008 SCML4Q8N228 414 aa13.66□□□□□ -0.22
NPAS3-209ENST00000551008 CLEC4CQ8WTT0 213 aa13.66□□□□□ -0.22
NPAS3-209ENST00000551008 SECISBP2LQ93073 1101 aaKnown RBP13.66□□□□□ -0.22
NPAS3-209ENST00000551008 ACOX2Q99424 681 aa13.66□□□□□ -0.22
NPAS3-209ENST00000551008 TPSD1Q9BZJ3 242 aa13.66□□□□□ -0.22
NPAS3-209ENST00000551008 DUSP15Q9H1R2 295 aaPredicted RBP13.66□□□□□ -0.22
NPAS3-209ENST00000551008 ACP6Q9NPH0 428 aa13.66□□□□□ -0.22
NPAS3-209ENST00000551008 FBXO10Q9UK96 956 aa13.66□□□□□ -0.22
NPAS3-209ENST00000551008 GMEB2Q9UKD1 530 aa13.66□□□□□ -0.22
NPAS3-209ENST00000551008 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.66□□□□□ -0.22
NPAS3-209ENST00000551008 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.66□□□□□ -0.22
NPAS3-209ENST00000551008 BECN2A8MW95 431 aa13.65□□□□□ -0.22
NPAS3-209ENST00000551008 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.65□□□□□ -0.22
NPAS3-209ENST00000551008 PIK3R2O00459 728 aa13.65□□□□□ -0.22
NPAS3-209ENST00000551008 EPN2O95208 641 aa13.65□□□□□ -0.22
NPAS3-209ENST00000551008 PENKP01210 267 aaPredicted RBP13.65□□□□□ -0.22
NPAS3-209ENST00000551008 HMBSP08397 361 aa13.65□□□□□ -0.22
NPAS3-209ENST00000551008 RALAP11233 206 aa13.65□□□□□ -0.22
NPAS3-209ENST00000551008 BCKDHBP21953 392 aa13.65□□□□□ -0.22
NPAS3-209ENST00000551008 CORO1AP31146 461 aaKnown RBP13.65□□□□□ -0.22
NPAS3-209ENST00000551008 RPL34P49207 117 aaKnown RBP13.65□□□□□ -0.22
NPAS3-209ENST00000551008 TRIP4Q15650 581 aaPredicted RBP13.65□□□□□ -0.22
NPAS3-209ENST00000551008 CCDC6Q16204 474 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms