RNA–Protein interactions for RNA: ENST00000550190.1

CACNB3-215, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 424 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-215ENST00000550190 BTBD6Q96KE9 485 aa9.41□□□□□ -0.9
CACNB3-215ENST00000550190 CFAP57Q96MR6 1250 aa9.41□□□□□ -0.9
CACNB3-215ENST00000550190 CYP2S1Q96SQ9 504 aa9.41□□□□□ -0.9
CACNB3-215ENST00000550190 TRIM62Q9BVG3 475 aa9.41□□□□□ -0.9
CACNB3-215ENST00000550190 WDR6Q9NNW5 1121 aaKnown RBP9.41□□□□□ -0.9
CACNB3-215ENST00000550190 OSGEPQ9NPF4 335 aa9.41□□□□□ -0.9
CACNB3-215ENST00000550190 OLA1Q9NTK5 396 aaKnown RBP9.41□□□□□ -0.9
CACNB3-215ENST00000550190 TRMT1Q9NXH9 659 aaKnown RBP9.41□□□□□ -0.9
CACNB3-215ENST00000550190 CLIC5Q9NZA1 410 aa9.41□□□□□ -0.9
CACNB3-215ENST00000550190 SFMBT1Q9UHJ3 866 aa9.41□□□□□ -0.9
CACNB3-215ENST00000550190 ANAPC7Q9UJX3 599 aa9.41□□□□□ -0.9
CACNB3-215ENST00000550190 TMEM59LQ9UK28 342 aa9.41□□□□□ -0.9
CACNB3-215ENST00000550190 STAP1Q9ULZ2 295 aa9.41□□□□□ -0.9
CACNB3-215ENST00000550190 PPP2R2CQ9Y2T4 447 aa9.41□□□□□ -0.9
CACNB3-215ENST00000550190 USP15Q9Y4E8 981 aaPredicted RBP9.41□□□□□ -0.9
CACNB3-215ENST00000550190 RANBP2P49792 3224 aaKnown RBP9.41□□□□□ -0.9
CACNB3-215ENST00000550190 DENND4AQ7Z401 1863 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 NUP210Q8TEM1 1887 aaPredicted RBP9.4□□□□□ -0.9
CACNB3-215ENST00000550190 TRAV19A0A0A6YYK7 116 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 TCRBV5S1A1TA0A578 114 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 MACROD2A1Z1Q3 448 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 GRXCR2A6NFK2 248 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 TMEM191CA6NGB0 347 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 M0QYT0 321 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 PJA2O43164 708 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 ZSCAN12O43309 604 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 COCHO43405 550 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 MBTPS2O43462 519 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 PAPLNO95428 1278 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 FYNP06241 537 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 CKMP06732 381 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 IRF1P10914 325 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 DESP17661 470 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 SP100P23497 879 aaPredicted RBP9.4□□□□□ -0.9
CACNB3-215ENST00000550190 PSMA2P25787 234 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 DDX6P26196 483 aaKnown RBP eCLIP9.4□□□□□ -0.9
CACNB3-215ENST00000550190 SDC4P31431 198 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 MATKP42679 507 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 PITX1P78337 314 aaPredicted RBP9.4□□□□□ -0.9
CACNB3-215ENST00000550190 ATP11AP98196 1134 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 NME3Q13232 169 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 MESDQ14696 234 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 C15orf59Q2T9L4 293 aaPredicted RBP9.4□□□□□ -0.9
CACNB3-215ENST00000550190 PPP1R15BQ5SWA1 713 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 SNX30Q5VWJ9 437 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 TRNP1Q6NT89 227 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 TADA2BQ86TJ2 420 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 MIB1Q86YT6 1006 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 SMRP1Q8NCR6 262 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 RNF34Q969K3 372 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 SLC2A13Q96QE2 648 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 CDK5RAP1Q96SZ6 601 aaKnown RBP9.4□□□□□ -0.9
CACNB3-215ENST00000550190 DDX23Q9BUQ8 820 aaKnown RBP9.4□□□□□ -0.9
CACNB3-215ENST00000550190 SLC46A2Q9BY10 475 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 TRIM7Q9C029 511 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 LACRTQ9GZZ8 138 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 RNF38Q9H0F5 515 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 SMG9Q9H0W8 520 aaKnown RBP9.4□□□□□ -0.9
CACNB3-215ENST00000550190 POMKQ9H5K3 350 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 TASP1Q9H6P5 420 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 FAM204AQ9H8W3 233 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 LZTFL1Q9NQ48 299 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 PRDM6Q9NQX0 595 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 UVRAGQ9P2Y5 699 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 TRIM10Q9UDY6 481 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 DNMT3LQ9UJW3 386 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 GUCA1BQ9UMX6 200 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 COG5Q9UP83 839 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 USTQ9Y2C2 406 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 PAXBP1Q9Y5B6 917 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 DUSP10Q9Y6W6 482 aa9.4□□□□□ -0.9
CACNB3-215ENST00000550190 CHD9Q3L8U1 2897 aa9.39□□□□□ -0.91
CACNB3-215ENST00000550190 SLC12A8A0AV02 714 aa9.39□□□□□ -0.91
CACNB3-215ENST00000550190 C2CD4BA6NLJ0 364 aa9.39□□□□□ -0.91
CACNB3-215ENST00000550190 MYO1FO00160 1098 aa9.39□□□□□ -0.91
CACNB3-215ENST00000550190 CCP110O43303 1012 aa9.39□□□□□ -0.91
CACNB3-215ENST00000550190 MSI1O43347 362 aaKnown RBP9.39□□□□□ -0.91
CACNB3-215ENST00000550190 KRT86O43790 486 aa9.39□□□□□ -0.91
CACNB3-215ENST00000550190 TRUB2O95900 331 aaKnown RBP9.39□□□□□ -0.91
CACNB3-215ENST00000550190 OAS1P00973 400 aaKnown RBP9.39□□□□□ -0.91
CACNB3-215ENST00000550190 TFE3P19532 575 aaPredicted RBP9.39□□□□□ -0.91
CACNB3-215ENST00000550190 GBP1P32455 592 aa9.39□□□□□ -0.91
CACNB3-215ENST00000550190 AVPR1AP37288 418 aa9.39□□□□□ -0.91
CACNB3-215ENST00000550190 SSR1P43307 286 aaKnown RBP9.39□□□□□ -0.91
CACNB3-215ENST00000550190 OGDHQ02218 1023 aa9.39□□□□□ -0.91
CACNB3-215ENST00000550190 DEUP1Q05D60 604 aa9.39□□□□□ -0.91
CACNB3-215ENST00000550190 SMAD4Q13485 552 aaKnown RBP9.39□□□□□ -0.91
CACNB3-215ENST00000550190 CCDC14Q49A88 953 aa9.39□□□□□ -0.91
CACNB3-215ENST00000550190 ARHGAP29Q52LW3 1261 aa9.39□□□□□ -0.91
CACNB3-215ENST00000550190 SCYL2Q6P3W7 929 aa9.39□□□□□ -0.91
CACNB3-215ENST00000550190 SND1Q7KZF4 910 aaKnown RBP eCLIP9.39□□□□□ -0.91
CACNB3-215ENST00000550190 TAC4Q86UU9 113 aa9.39□□□□□ -0.91
CACNB3-215ENST00000550190 REXO1L1PQ8IX06 675 aa9.39□□□□□ -0.91
CACNB3-215ENST00000550190 CMTM8Q8IZV2 173 aa9.39□□□□□ -0.91
CACNB3-215ENST00000550190 CCAR2Q8N163 923 aaKnown RBP9.39□□□□□ -0.91
CACNB3-215ENST00000550190 ST13P5Q8NFI4 369 aaPredicted RBP9.39□□□□□ -0.91
CACNB3-215ENST00000550190 DQX1Q8TE96 717 aaKnown RBP9.39□□□□□ -0.91
CACNB3-215ENST00000550190 FGF13Q92913 245 aa9.39□□□□□ -0.91
CACNB3-215ENST00000550190 ZSWIM3Q96MP5 696 aa9.39□□□□□ -0.91
CACNB3-215ENST00000550190 NECTIN4Q96NY8 510 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms