RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 FAM47DPA6NHR8 397 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 GFRA2O00451 464 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 PAPSS1O43252 624 aaPredicted RBP7.22□□□□□ -1.25
LIN7A-202ENST00000549417 COCHO43405 550 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 FAM189A1O60320 539 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 OLFM2O95897 454 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 WNT1P04628 370 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 MAPTP10636 758 aaKnown RBP7.22□□□□□ -1.25
LIN7A-202ENST00000549417 RPS6KB1P23443 525 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 CD27P26842 260 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 RPA1P27694 616 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 MCM7P33993 719 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 CCT6AP40227 531 aaKnown RBP7.22□□□□□ -1.25
LIN7A-202ENST00000549417 DGKGP49619 791 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 COPAP53621 1224 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 ERVPABLB-1P60509 514 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 PSMC1P62191 440 aaKnown RBP7.22□□□□□ -1.25
LIN7A-202ENST00000549417 MYL7Q01449 175 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 TAF10Q12962 218 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 SRSF6Q13247 344 aaKnown RBP7.22□□□□□ -1.25
LIN7A-202ENST00000549417 ORC1Q13415 861 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 ARL13BQ3SXY8 428 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 SV2CQ496J9 727 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 C3orf38Q5JPI3 329 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 SCARA3Q6AZY7 606 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 FOXR1Q6PIV2 292 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 BLOC1S2Q6QNY1 142 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 CLEC18BQ6UXF7 455 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 DENND5BQ6ZUT9 1274 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 DDX42Q86XP3 938 aaKnown RBP eCLIP7.22□□□□□ -1.25
LIN7A-202ENST00000549417 FAM26EQ8N5C1 309 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 CLEC18CQ8NCF0 446 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 TMEM161BQ8NDZ6 487 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 ERMNQ8TAM6 284 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 XPO6Q96QU8 1125 aaKnown RBP7.22□□□□□ -1.25
LIN7A-202ENST00000549417 MMS19Q96T76 1030 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 ACBD6Q9BR61 282 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 OSBPL2Q9H1P3 480 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 EPN3Q9H201 632 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 POLR1BQ9H9Y6 1135 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 THSD1Q9NS62 852 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 DDX19AQ9NUU7 478 aaKnown RBP7.22□□□□□ -1.25
LIN7A-202ENST00000549417 PLEKHB1Q9UF11 243 aaPredicted RBP7.22□□□□□ -1.25
LIN7A-202ENST00000549417 LRWD1Q9UFC0 647 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 L1RE1Q9UN81 338 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 PCDHGA4Q9Y5G9 962 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 ZFC3H1O60293 1989 aaKnown RBP7.22□□□□□ -1.25
LIN7A-202ENST00000549417 MYH11P35749 1972 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 PTPRJQ12913 1337 aa7.22□□□□□ -1.25
LIN7A-202ENST00000549417 AKAP9Q99996 3911 aa7.21□□□□□ -1.25
LIN7A-202ENST00000549417 PMS2P1A4D2B8 440 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 E9PMD0 336 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 EFSO43281 561 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 CACNG3O60359 315 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 DFNA5O60443 496 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 TSPAN3O60637 253 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 SDC3O75056 442 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 CSO75390 466 aaKnown RBP7.21□□□□□ -1.26
LIN7A-202ENST00000549417 DXOO77932 396 aaKnown RBP7.21□□□□□ -1.26
LIN7A-202ENST00000549417 SEMA4FO95754 770 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 IGLV3-19P01714 112 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 PFKLP17858 780 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 PAX3P23760 479 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 PRKCHP24723 683 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 ANXA13P27216 316 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 EPHA8P29322 1005 aaPredicted RBP7.21□□□□□ -1.26
LIN7A-202ENST00000549417 KRT2P35908 639 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 LSSP48449 732 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 ACOT2P49753 483 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 LIG4P49917 911 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 CDH8P55286 799 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 CYP27A1Q02318 531 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 MAPK7Q13164 816 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 ILKQ13418 452 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 CFAP221Q4G0U5 840 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 ZPBP2Q6X784 338 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 LSMEM2Q8N112 164 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 KIAA1958Q8N8K9 716 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 SORCS1Q8WY21 1168 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 TNFRSF25Q93038 417 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 MYLPFQ96A32 169 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 OTUB2Q96DC9 234 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 FAM84AQ96KN4 292 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 ORAI3Q9BRQ5 295 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 MSTO1Q9BUK6 570 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 GZF1Q9H116 711 aaPredicted RBP7.21□□□□□ -1.26
LIN7A-202ENST00000549417 CCSER2Q9H7U1 834 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 OSGEPQ9NPF4 335 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 MAGEC2Q9UBF1 373 aaPredicted RBP7.21□□□□□ -1.26
LIN7A-202ENST00000549417 SATB2Q9UPW6 733 aa7.21□□□□□ -1.26
LIN7A-202ENST00000549417 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.21□□□□□ -1.26
LIN7A-202ENST00000549417 CKAP5Q14008 2032 aa7.2□□□□□ -1.26
LIN7A-202ENST00000549417 A0A1W2PNU3 283 aaPredicted RBP7.2□□□□□ -1.26
LIN7A-202ENST00000549417 F8VP50 259 aa7.2□□□□□ -1.26
LIN7A-202ENST00000549417 WNT9AO14904 365 aa7.2□□□□□ -1.26
LIN7A-202ENST00000549417 HNRNPDLO14979 420 aaKnown RBP7.2□□□□□ -1.26
LIN7A-202ENST00000549417 VILLO15195 856 aa7.2□□□□□ -1.26
LIN7A-202ENST00000549417 OGTO15294 1046 aa7.2□□□□□ -1.26
LIN7A-202ENST00000549417 HUS1O60921 280 aa7.2□□□□□ -1.26
LIN7A-202ENST00000549417 EPHX1P07099 455 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms