RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 RAPGEF1Q13905 1077 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 RAB33AQ14088 237 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 COL19A1Q14993 1142 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 MAPRE1Q15691 268 aaKnown RBP6.72□□□□□ -1.33
PRKDC-211ENST00000546304 NFE2Q16621 373 aaPredicted RBP6.72□□□□□ -1.33
PRKDC-211ENST00000546304 PTPN21Q16825 1174 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 MDH1BQ5I0G3 518 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 RPS26P11Q5JNZ5 115 aaPredicted RBP6.72□□□□□ -1.33
PRKDC-211ENST00000546304 ARTNQ5T4W7 220 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 LIN9Q5TKA1 542 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 KLHDC7AQ5VTJ3 777 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 TPGS2Q68CL5 300 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 IQCEQ6IPM2 695 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 DPY19L2P1Q6NXN4 242 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 LLGL2Q6P1M3 1020 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 FDX2Q6P4F2 183 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 SARM1Q6SZW1 724 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 TMEM270Q6UE05 265 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 UNC93AQ86WB7 457 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 DCP1BQ8IZD4 617 aaKnown RBP6.72□□□□□ -1.33
PRKDC-211ENST00000546304 EFHBQ8N7U6 833 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 RBBP8NLQ8NC74 664 aaPredicted RBP6.72□□□□□ -1.33
PRKDC-211ENST00000546304 VN1R2Q8NFZ6 395 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 NEK11Q8NG66 645 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 SLC7A14Q8TBB6 771 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 SHC3Q92529 594 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 JAKMIP2Q96AA8 810 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 TNIP3Q96KP6 325 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 NAP1L5Q96NT1 182 aaPredicted RBP6.72□□□□□ -1.33
PRKDC-211ENST00000546304 NT5C1AQ9BXI3 368 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 XPO4Q9C0E2 1151 aaKnown RBP6.72□□□□□ -1.33
PRKDC-211ENST00000546304 ELOVL4Q9GZR5 314 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 DNAI2Q9GZS0 605 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 UBE2TQ9NPD8 197 aaPredicted RBP6.72□□□□□ -1.33
PRKDC-211ENST00000546304 CRTAC1Q9NQ79 661 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 MAN1C1Q9NR34 630 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 KRT82Q9NSB4 513 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 FAM49BQ9NUQ9 324 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 AFF4Q9UHB7 1163 aaKnown RBP6.72□□□□□ -1.33
PRKDC-211ENST00000546304 RNF112Q9ULX5 631 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 HIF3AQ9Y2N7 669 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 DAAM1Q9Y4D1 1078 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 YIPF1Q9Y548 306 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 ATP8B3O60423 1300 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 MUC3AQ02505 3323 aa6.71□□□□□ -1.33
PRKDC-211ENST00000546304 NOTCH4Q99466 2003 aa6.71□□□□□ -1.33
PRKDC-211ENST00000546304 TMEM238LA0A1B0GVL6 79 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 MYBPHLA2RUH7 354 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 PRRG1O14668 218 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 LINC01565O15544 149 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 SART1O43290 800 aaKnown RBP6.71□□□□□ -1.34
PRKDC-211ENST00000546304 ATP2C2O75185 946 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 NOL4O94818 638 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 ABLIM3O94929 683 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 VNN2O95498 520 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 C1RP00736 705 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 C8AP07357 584 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 PDGFRBP09619 1106 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 PNMA6AP0CW24 399 aaPredicted RBP6.71□□□□□ -1.34
PRKDC-211ENST00000546304 KRT5P13647 590 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 CCDC130P13994 396 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 ATF2P15336 505 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 PBX1P40424 430 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 RAD23BP54727 409 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 POLR2FP61218 127 aaKnown RBP6.71□□□□□ -1.34
PRKDC-211ENST00000546304 RBM10P98175 930 aaKnown RBP6.71□□□□□ -1.34
PRKDC-211ENST00000546304 CYP27A1Q02318 531 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 ADCY1Q08828 1119 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 SMARCB1Q12824 385 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 KCNC3Q14003 757 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 GRM2Q14416 872 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 NR1I3Q14994 352 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 ARHGAP44Q17R89 818 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 CFAP221Q4G0U5 840 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 ZNF394Q53GI3 561 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 EXOSC6Q5RKV6 272 aaKnown RBP6.71□□□□□ -1.34
PRKDC-211ENST00000546304 C4orf50Q6ZRC1 276 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 ACOT1Q86TX2 421 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 LRRTM3Q86VH5 581 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 PALB2Q86YC2 1186 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 SPATA2LQ8IUW3 424 aaPredicted RBP6.71□□□□□ -1.34
PRKDC-211ENST00000546304 TTC9BQ8N6N2 239 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 SLC4A11Q8NBS3 891 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 ATAD1Q8NBU5 361 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 KREMEN2Q8NCW0 462 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 MAFAQ8NHW3 353 aaPredicted RBP6.71□□□□□ -1.34
PRKDC-211ENST00000546304 ZNF461Q8TAF7 563 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 MYCBPAPQ8TBZ2 947 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 SPPL2BQ8TCT7 592 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 EPS8L3Q8TE67 593 aaKnown RBP6.71□□□□□ -1.34
PRKDC-211ENST00000546304 C2orf15Q8WU43 125 aaKnown RBP6.71□□□□□ -1.34
PRKDC-211ENST00000546304 SLC22A17Q8WUG5 538 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 CASP10Q92851 521 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 PABPC5Q96DU9 382 aaKnown RBP6.71□□□□□ -1.34
PRKDC-211ENST00000546304 PCED1BQ96HM7 432 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 FUBP3Q96I24 572 aaKnown RBP eCLIP6.71□□□□□ -1.34
PRKDC-211ENST00000546304 SPAG5Q96R06 1193 aa6.71□□□□□ -1.34
PRKDC-211ENST00000546304 SEPT5Q99719 369 aaPredicted RBP6.71□□□□□ -1.34
PRKDC-211ENST00000546304 NAA15Q9BXJ9 866 aaKnown RBP6.71□□□□□ -1.34
PRKDC-211ENST00000546304 RHOBTB2Q9BYZ6 727 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms