RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 PRR23CQ6ZRP0 262 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 TMEM161BQ8NDZ6 487 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 GABPB2Q8TAK5 448 aaPredicted RBP8.16□□□□□ -1.1
UBR1-202ENST00000546274 CHURC1Q8WUH1 139 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 C7orf43Q8WVR3 580 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 ITPKCQ96DU7 683 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 FAM84AQ96KN4 292 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 ZBED2Q9BTP6 218 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 RNF38Q9H0F5 515 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 DSEQ9UL01 958 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 PCDHGA8Q9Y5G5 932 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 CEPT1Q9Y6K0 416 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 COL11A1P12107 1806 aaPredicted RBP8.16□□□□□ -1.1
UBR1-202ENST00000546274 GSTTP1A0A1W2PQM5 241 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 PFDN6O15212 129 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 ITM2AO43736 263 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 ICAM1P05362 532 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 THRAP10827 490 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 KRT15P19012 456 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 BDNFP23560 247 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 RPA3P35244 121 aaPredicted RBP8.16□□□□□ -1.1
UBR1-202ENST00000546274 EPHB1P54762 984 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 SNRPFP62306 86 aaKnown RBP8.16□□□□□ -1.1
UBR1-202ENST00000546274 ZNF200P98182 395 aaPredicted RBP8.16□□□□□ -1.1
UBR1-202ENST00000546274 GHRHRQ02643 423 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 TRIP13Q15645 432 aaPredicted RBP8.16□□□□□ -1.1
UBR1-202ENST00000546274 TRMT5Q32P41 509 aaKnown RBP8.16□□□□□ -1.1
UBR1-202ENST00000546274 TIGD2Q4W5G0 525 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 USP43Q70EL4 1123 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 NIPA1Q7RTP0 329 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 ULK2Q8IYT8 1036 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 TTLL6Q8N841 843 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 RBM15BQ8NDT2 890 aaKnown RBP8.16□□□□□ -1.1
UBR1-202ENST00000546274 FAM172AQ8WUF8 416 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 CAPSLQ8WWF8 208 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 BSNDQ8WZ55 320 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 THAP11Q96EK4 314 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 PLEKHA8Q96JA3 519 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 ZFRQ96KR1 1074 aaKnown RBP8.16□□□□□ -1.1
UBR1-202ENST00000546274 TMEM8AQ9HCN3 771 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 TBX20Q9UMR3 447 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 SCINQ9Y6U3 715 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 CLRN2A0PK11 232 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 SPDYE2BA6NHP3 402 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 TTC34A8MYJ7 566 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 TTC4O95801 387 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 SPDYE6P0CI01 402 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 SRGAP2CP0DJJ0 459 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 SRGAP2BP0DMP2 458 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 RARBP10826 455 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 NELFEP18615 380 aaKnown RBP8.15□□□□□ -1.1
UBR1-202ENST00000546274 ACTR3P61158 418 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 TUBA1BP68363 451 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 KLF1Q13351 362 aaPredicted RBP8.15□□□□□ -1.1
UBR1-202ENST00000546274 ARHGEF6Q15052 776 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 PDK1Q15118 436 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 RASA2Q15283 850 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 SGO2Q562F6 1265 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 PCNX4Q63HM2 1172 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 PLA2G4FQ68DD2 849 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 CYP4F22Q6NT55 531 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 TUBA1AQ71U36 451 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 ANKS1BQ7Z6G8 1248 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 UBE2Q1Q7Z7E8 422 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 MAP4K3Q8IVH8 894 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 MFSD14AQ96MC6 490 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 FBXL18Q96ME1 805 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 MRPS26Q9BYN8 205 aaKnown RBP8.15□□□□□ -1.1
UBR1-202ENST00000546274 ZNF219Q9P2Y4 722 aaPredicted RBP8.15□□□□□ -1.1
UBR1-202ENST00000546274 FEM1BQ9UK73 627 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 KIAA1257Q9ULG3 409 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 CCDC162PA2VCL2 907 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 TMEM114B3SHH9 223 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 POC1B-GALNT4F8VUJ3 575 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 F8W8V4 182 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 TMX2-CTNND1H3BSU7 103 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 AQP9O43315 295 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 ZC3H11AO75152 810 aaKnown RBP eCLIP8.15□□□□□ -1.1
UBR1-202ENST00000546274 CCNE2O96020 404 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 FGFR1P11362 822 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 CPA3P15088 417 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 ITIH2P19823 946 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 ITGA8P53708 1063 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 OASLQ15646 514 aaKnown RBP8.15□□□□□ -1.1
UBR1-202ENST00000546274 SLC1A5Q15758 541 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 NANOGP8Q6NSW7 305 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 CCDC81Q6ZN84 652 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 RNF111Q6ZNA4 994 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 FAM160B2Q86V87 743 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 SLC38A6Q8IZM9 456 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 SPERTQ8NA61 448 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 FBXL13Q8NEE6 735 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 SNF8Q96H20 258 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 C9orf72Q96LT7 481 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 DCLK3Q9C098 648 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 C12orf65Q9H3J6 166 aaKnown RBP8.15□□□□□ -1.1
UBR1-202ENST00000546274 CLK4Q9HAZ1 481 aaKnown RBP8.15□□□□□ -1.1
UBR1-202ENST00000546274 RAB20Q9NX57 234 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 KANSL3Q9P2N6 904 aa8.15□□□□□ -1.1
UBR1-202ENST00000546274 ANAPC7Q9UJX3 599 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms