RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 CAPN11Q9UMQ6 739 aa5.63□□□□□ -1.51
SNHG1-224ENST00000545688 LY6G6EA0A0G2JKS1 128 aa5.62□□□□□ -1.51
SNHG1-224ENST00000545688 TRIM38O00635 465 aa5.62□□□□□ -1.51
SNHG1-224ENST00000545688 YY1P25490 414 aa5.62□□□□□ -1.51
SNHG1-224ENST00000545688 HTR7P34969 479 aa5.62□□□□□ -1.51
SNHG1-224ENST00000545688 POLGP54098 1239 aaPredicted RBP5.62□□□□□ -1.51
SNHG1-224ENST00000545688 HTRA4P83105 476 aaPredicted RBP5.62□□□□□ -1.51
SNHG1-224ENST00000545688 CLCA4Q14CN2 919 aa5.62□□□□□ -1.51
SNHG1-224ENST00000545688 CYB5RLQ6IPT4 315 aa5.62□□□□□ -1.51
SNHG1-224ENST00000545688 GRHL2Q6ISB3 625 aa5.62□□□□□ -1.51
SNHG1-224ENST00000545688 C16orf71Q8IYS4 520 aaPredicted RBP5.62□□□□□ -1.51
SNHG1-224ENST00000545688 ZDHHC12Q96GR4 267 aa5.62□□□□□ -1.51
SNHG1-224ENST00000545688 HIC2Q96JB3 615 aa5.62□□□□□ -1.51
SNHG1-224ENST00000545688 APOL5Q9BWW9 433 aa5.62□□□□□ -1.51
SNHG1-224ENST00000545688 FZD4Q9ULV1 537 aa5.62□□□□□ -1.51
SNHG1-224ENST00000545688 MAFFQ9ULX9 164 aa5.62□□□□□ -1.51
SNHG1-224ENST00000545688 TLR2O60603 784 aa5.61□□□□□ -1.51
SNHG1-224ENST00000545688 TMEM225BP0DP42 221 aa5.61□□□□□ -1.51
SNHG1-224ENST00000545688 COL15A1P39059 1388 aa5.61□□□□□ -1.51
SNHG1-224ENST00000545688 FOXG1P55316 489 aaPredicted RBP5.61□□□□□ -1.51
SNHG1-224ENST00000545688 ID2Q02363 134 aa5.61□□□□□ -1.51
SNHG1-224ENST00000545688 ANO7Q6IWH7 933 aa5.61□□□□□ -1.51
SNHG1-224ENST00000545688 PIP4P1Q86T03 277 aa5.61□□□□□ -1.51
SNHG1-224ENST00000545688 FSTL5Q8N475 847 aaPredicted RBP5.61□□□□□ -1.51
SNHG1-224ENST00000545688 IGFBPL1Q8WX77 278 aa5.61□□□□□ -1.51
SNHG1-224ENST00000545688 STRBPQ96SI9 672 aaKnown RBP5.61□□□□□ -1.51
SNHG1-224ENST00000545688 BTBD1Q9H0C5 482 aa5.61□□□□□ -1.51
SNHG1-224ENST00000545688 ZMYM2Q9UBW7 1377 aa5.6□□□□□ -1.51
SNHG1-224ENST00000545688 IKBKBO14920 756 aa5.6□□□□□ -1.51
SNHG1-224ENST00000545688 ANXA2P07355 339 aaKnown RBP5.6□□□□□ -1.51
SNHG1-224ENST00000545688 TMEM191BP0C7N4 346 aa5.6□□□□□ -1.51
SNHG1-224ENST00000545688 FHL3Q13643 280 aa5.6□□□□□ -1.51
SNHG1-224ENST00000545688 KPNB1Q14974 876 aaKnown RBP5.6□□□□□ -1.51
SNHG1-224ENST00000545688 DEF8Q6ZN54 512 aa5.6□□□□□ -1.51
SNHG1-224ENST00000545688 RNF44Q7L0R7 432 aa5.6□□□□□ -1.51
SNHG1-224ENST00000545688 P3H2Q8IVL5 708 aa5.6□□□□□ -1.51
SNHG1-224ENST00000545688 SDR16C5Q8N3Y7 309 aa5.6□□□□□ -1.51
SNHG1-224ENST00000545688 FAM71DQ8N9W8 422 aa5.6□□□□□ -1.51
SNHG1-224ENST00000545688 MBD3L2Q8NHZ7 208 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-224ENST00000545688 TTC8Q8TAM2 541 aa5.6□□□□□ -1.51
SNHG1-224ENST00000545688 PRR11Q96HE9 360 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-224ENST00000545688 BRIP1Q9BX63 1249 aa5.6□□□□□ -1.51
SNHG1-224ENST00000545688 ZCWPW1Q9H0M4 648 aa5.6□□□□□ -1.51
SNHG1-224ENST00000545688 FOXP1Q9H334 677 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-224ENST00000545688 PRDM11Q9NQV5 511 aa5.6□□□□□ -1.51
SNHG1-224ENST00000545688 VPS45Q9NRW7 570 aa5.6□□□□□ -1.51
SNHG1-224ENST00000545688 SHROOM4Q9ULL8 1493 aa5.59□□□□□ -1.51
SNHG1-224ENST00000545688 CNOT3O75175 753 aaKnown RBP5.59□□□□□ -1.51
SNHG1-224ENST00000545688 WDR47O94967 919 aa5.59□□□□□ -1.51
SNHG1-224ENST00000545688 MBPP02686 304 aaPredicted RBP5.59□□□□□ -1.51
SNHG1-224ENST00000545688 CTSAP10619 480 aa5.59□□□□□ -1.51
SNHG1-224ENST00000545688 RPL17P18621 184 aaKnown RBP5.59□□□□□ -1.51
SNHG1-224ENST00000545688 TACR3P29371 465 aa5.59□□□□□ -1.51
SNHG1-224ENST00000545688 GALNSP34059 522 aa5.59□□□□□ -1.51
SNHG1-224ENST00000545688 LINC00205P59089 165 aa5.59□□□□□ -1.51
SNHG1-224ENST00000545688 KRTAP10-9P60411 292 aa5.59□□□□□ -1.51
SNHG1-224ENST00000545688 RPS13P62277 151 aaKnown RBP5.59□□□□□ -1.51
SNHG1-224ENST00000545688 CCDC15Q0P6D6 951 aa5.59□□□□□ -1.51
SNHG1-224ENST00000545688 MTAPQ13126 283 aa5.59□□□□□ -1.51
SNHG1-224ENST00000545688 RRAGBQ5VZM2 374 aa5.59□□□□□ -1.51
SNHG1-224ENST00000545688 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.59□□□□□ -1.51
SNHG1-224ENST00000545688 VCPIP1Q96JH7 1222 aa5.59□□□□□ -1.51
SNHG1-224ENST00000545688 FAM227BQ96M60 508 aa5.59□□□□□ -1.51
SNHG1-224ENST00000545688 SLC25A32Q9H2D1 315 aa5.59□□□□□ -1.51
SNHG1-224ENST00000545688 SAP30LQ9HAJ7 183 aa5.59□□□□□ -1.51
SNHG1-224ENST00000545688 HEY2Q9UBP5 337 aa5.59□□□□□ -1.51
SNHG1-224ENST00000545688 CORO2BQ9UQ03 480 aa5.59□□□□□ -1.51
SNHG1-224ENST00000545688 SNX13Q9Y5W8 968 aa5.59□□□□□ -1.51
SNHG1-224ENST00000545688 MYMKA6NI61 221 aa5.58□□□□□ -1.52
SNHG1-224ENST00000545688 TMIGD3P0DMS9 266 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-224ENST00000545688 SRSF1Q07955 248 aaKnown RBP eCLIP5.58□□□□□ -1.525e-12■■□□□ 12.5
SNHG1-224ENST00000545688 PFKFB3Q16875 520 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-224ENST00000545688 SLC9C1Q4G0N8 1177 aa5.58□□□□□ -1.52
SNHG1-224ENST00000545688 ANKRD13BQ86YJ7 626 aa5.58□□□□□ -1.52
SNHG1-224ENST00000545688 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.58□□□□□ -1.52
SNHG1-224ENST00000545688 TIFAQ96CG3 184 aa5.58□□□□□ -1.52
SNHG1-224ENST00000545688 CINPQ9BW66 212 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-224ENST00000545688 ADGRE3Q9BY15 652 aa5.58□□□□□ -1.52
SNHG1-224ENST00000545688 UNKQ9C0B0 810 aaKnown RBP5.58□□□□□ -1.52
SNHG1-224ENST00000545688 NUAK2Q9H093 628 aa5.58□□□□□ -1.52
SNHG1-224ENST00000545688 NUP62CLQ9H1M0 184 aa5.58□□□□□ -1.52
SNHG1-224ENST00000545688 HEYLQ9NQ87 328 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-224ENST00000545688 SEMA5BQ9P283 1151 aa5.58□□□□□ -1.52
SNHG1-224ENST00000545688 RB1CC1Q8TDY2 1594 aa5.58□□□□□ -1.52
SNHG1-224ENST00000545688 A0A087WZ62 844 aa5.57□□□□□ -1.52
SNHG1-224ENST00000545688 RRHO14718 337 aa5.57□□□□□ -1.52
SNHG1-224ENST00000545688 INPPL1O15357 1258 aa5.57□□□□□ -1.52
SNHG1-224ENST00000545688 INSIG1O15503 277 aa5.57□□□□□ -1.52
SNHG1-224ENST00000545688 ATF3P18847 181 aa5.57□□□□□ -1.52
SNHG1-224ENST00000545688 JAK3P52333 1124 aa5.57□□□□□ -1.52
SNHG1-224ENST00000545688 HSF1Q00613 529 aa5.57□□□□□ -1.52
SNHG1-224ENST00000545688 DNASE1L3Q13609 305 aa5.57□□□□□ -1.52
SNHG1-224ENST00000545688 DAG1Q14118 895 aa5.57□□□□□ -1.52
SNHG1-224ENST00000545688 ACOX1Q15067 660 aa5.57□□□□□ -1.52
SNHG1-224ENST00000545688 TWIST1Q15672 202 aa5.57□□□□□ -1.52
SNHG1-224ENST00000545688 AASDHQ4L235 1098 aaPredicted RBP5.57□□□□□ -1.52
SNHG1-224ENST00000545688 ZNF517Q6ZMY9 492 aaPredicted RBP5.57□□□□□ -1.52
SNHG1-224ENST00000545688 ZNF548Q8NEK5 533 aaPredicted RBP5.57□□□□□ -1.52
SNHG1-224ENST00000545688 SUN3Q8TAQ9 357 aa5.57□□□□□ -1.52
SNHG1-224ENST00000545688 PHKBQ93100 1093 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms