RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 VN1R2Q8NFZ6 395 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 SMARCC2Q8TAQ2 1214 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 KCNG4Q8TDN1 519 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 NRG4Q8WWG1 115 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 HDAC10Q969S8 669 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 CGRRF1Q99675 332 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 TCF25Q9BQ70 676 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 ATP6V0A4Q9HBG4 840 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 RXFP1Q9HBX9 757 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 KMT5AQ9NQR1 393 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 DBR1Q9UK59 544 aaKnown RBP6.8□□□□□ -1.32
CPSF7-222ENST00000544585 USP18Q9UMW8 372 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 POLHQ9Y253 713 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 FRMPD4Q14CM0 1322 aa6.79□□□□□ -1.32
CPSF7-222ENST00000544585 SALL3Q9BXA9 1300 aa6.79□□□□□ -1.32
CPSF7-222ENST00000544585 SPTBN4Q9H254 2564 aa6.79□□□□□ -1.32
CPSF7-222ENST00000544585 NLRC5Q86WI3 1866 aa6.79□□□□□ -1.32
CPSF7-222ENST00000544585 ERICH2A1L162 156 aa6.79□□□□□ -1.32
CPSF7-222ENST00000544585 PRR19A6NJB7 356 aa6.79□□□□□ -1.32
CPSF7-222ENST00000544585 C2CD4DB7Z1M9 353 aa6.79□□□□□ -1.32
CPSF7-222ENST00000544585 HIP1O00291 1037 aa6.79□□□□□ -1.32
CPSF7-222ENST00000544585 ATP9AO75110 1047 aa6.79□□□□□ -1.32
CPSF7-222ENST00000544585 LMNAP02545 664 aaKnown RBP6.79□□□□□ -1.32
CPSF7-222ENST00000544585 AOC1P19801 751 aa6.79□□□□□ -1.32
CPSF7-222ENST00000544585 MARK3P27448 753 aa6.79□□□□□ -1.32
CPSF7-222ENST00000544585 SMARCA1P28370 1054 aa6.79□□□□□ -1.32
CPSF7-222ENST00000544585 PPM1AP35813 382 aa6.79□□□□□ -1.32
CPSF7-222ENST00000544585 SLC26A2P50443 739 aa6.79□□□□□ -1.32
CPSF7-222ENST00000544585 INSM1Q01101 510 aaPredicted RBP6.79□□□□□ -1.32
CPSF7-222ENST00000544585 BNIP3Q12983 259 aa6.79□□□□□ -1.32
CPSF7-222ENST00000544585 TRDNQ13061 729 aa6.79□□□□□ -1.32
CPSF7-222ENST00000544585 GIT2Q14161 759 aa6.79□□□□□ -1.32
CPSF7-222ENST00000544585 CNN3Q15417 329 aaKnown RBP6.79□□□□□ -1.32
CPSF7-222ENST00000544585 LYSMD2Q8IV50 215 aa6.79□□□□□ -1.32
CPSF7-222ENST00000544585 MRPL43Q8N983 215 aaKnown RBP6.79□□□□□ -1.32
CPSF7-222ENST00000544585 LRTOMTQ8WZ04 291 aa6.79□□□□□ -1.32
CPSF7-222ENST00000544585 RILPL2Q969X0 211 aa6.79□□□□□ -1.32
CPSF7-222ENST00000544585 SGCZQ96LD1 299 aa6.79□□□□□ -1.32
CPSF7-222ENST00000544585 SCLT1Q96NL6 688 aa6.79□□□□□ -1.32
CPSF7-222ENST00000544585 ADAM2Q99965 735 aa6.79□□□□□ -1.32
CPSF7-222ENST00000544585 ADI1Q9BV57 179 aa6.79□□□□□ -1.32
CPSF7-222ENST00000544585 FAM49AQ9H0Q0 323 aaPredicted RBP6.79□□□□□ -1.32
CPSF7-222ENST00000544585 CWH43Q9H720 699 aa6.79□□□□□ -1.32
CPSF7-222ENST00000544585 ENTPD7Q9NQZ7 604 aa6.79□□□□□ -1.32
CPSF7-222ENST00000544585 TMEM161AQ9NX61 479 aa6.79□□□□□ -1.32
CPSF7-222ENST00000544585 SPG21Q9NZD8 308 aa6.79□□□□□ -1.32
CPSF7-222ENST00000544585 FNIP2Q9P278 1114 aa6.79□□□□□ -1.32
CPSF7-222ENST00000544585 IPPQ9Y573 584 aa6.79□□□□□ -1.32
CPSF7-222ENST00000544585 ZC3H12DA2A288 527 aaKnown RBP6.78□□□□□ -1.32
CPSF7-222ENST00000544585 HIDE1A8MVS5 230 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 MEIS2O14770 477 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 CXCL14O95715 111 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 H2AFB1P0C5Y9 115 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 H2AFB2P0C5Z0 115 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 KCNA2P16389 499 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 SDHBP21912 280 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 SP100P23497 879 aaPredicted RBP6.78□□□□□ -1.32
CPSF7-222ENST00000544585 KLRC1P26715 233 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 MC4RP32245 332 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 GATMP50440 423 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 STAT5BP51692 787 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 AGFG1P52594 562 aaKnown RBP6.78□□□□□ -1.32
CPSF7-222ENST00000544585 TMEM62Q0P6H9 643 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 TDGQ13569 410 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 SMC1AQ14683 1233 aaKnown RBP6.78□□□□□ -1.32
CPSF7-222ENST00000544585 GRM4Q14833 912 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 ANGPT1Q15389 498 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 ADRM1Q16186 407 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 C3orf36Q3SXR2 165 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 PLPP4Q5VZY2 271 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 USP17L6PQ6QN14 398 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 MTHFD1LQ6UB35 978 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 SLC41A1Q8IVJ1 513 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 CCDC105Q8IYK2 499 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 KRT78Q8N1N4 520 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 TDRD5Q8NAT2 981 aaKnown RBP6.78□□□□□ -1.32
CPSF7-222ENST00000544585 FLCNQ8NFG4 579 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 GAB3Q8WWW8 586 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 RIN2Q8WYP3 895 aaPredicted RBP6.78□□□□□ -1.32
CPSF7-222ENST00000544585 ZNF558Q96NG5 402 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 TMEM117Q9H0C3 514 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 MTG2Q9H4K7 406 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 POMKQ9H5K3 350 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 ERVK-5Q9HDB9 667 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 JADE2Q9NQC1 790 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 ST3GAL5Q9UNP4 418 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 SLC5A6Q9Y289 635 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 TRIOO75962 3097 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 CFAP54Q96N23 3096 aa6.78□□□□□ -1.32
CPSF7-222ENST00000544585 CFAP69A5D8W1 941 aa6.77□□□□□ -1.33
CPSF7-222ENST00000544585 NOTOA8MTQ0 251 aa6.77□□□□□ -1.33
CPSF7-222ENST00000544585 IFIT3O14879 490 aaKnown RBP6.77□□□□□ -1.33
CPSF7-222ENST00000544585 CYTH3O43739 400 aa6.77□□□□□ -1.33
CPSF7-222ENST00000544585 HBP1O60381 514 aa6.77□□□□□ -1.33
CPSF7-222ENST00000544585 PSPNO60542 156 aa6.77□□□□□ -1.33
CPSF7-222ENST00000544585 CYBBP04839 570 aa6.77□□□□□ -1.33
CPSF7-222ENST00000544585 DBHP09172 617 aa6.77□□□□□ -1.33
CPSF7-222ENST00000544585 ITGB5P18084 799 aa6.77□□□□□ -1.33
CPSF7-222ENST00000544585 XPAP23025 273 aaPredicted RBP6.77□□□□□ -1.33
CPSF7-222ENST00000544585 WASP42768 502 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms