RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 KRT13P13646 458 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 TNNI1P19237 187 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 POU3F2P20265 443 aaPredicted RBP5.45□□□□□ -1.54
CLIP1-217ENST00000543205 CYP3A5P20815 502 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 RPL9P32969 192 aaKnown RBP5.45□□□□□ -1.54
CLIP1-217ENST00000543205 PBX3P40426 434 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 PMS1P54277 932 aaKnown RBP5.45□□□□□ -1.54
CLIP1-217ENST00000543205 TFAMQ00059 246 aaKnown RBP5.45□□□□□ -1.54
CLIP1-217ENST00000543205 CYP24A1Q07973 514 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 DSC1Q08554 894 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 GPM6BQ13491 265 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 PDE1CQ14123 709 aaPredicted RBP5.45□□□□□ -1.54
CLIP1-217ENST00000543205 PSMD6Q15008 389 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 POU4F3Q15319 338 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 STX1AQ16623 288 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 TPD52L1Q16890 204 aaPredicted RBP5.45□□□□□ -1.54
CLIP1-217ENST00000543205 INAVAQ3KP66 663 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 DPCR1Q3MIW9 517 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 ZCWPW2Q504Y3 356 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 ZC3H12BQ5HYM0 836 aaKnown RBP5.45□□□□□ -1.54
CLIP1-217ENST00000543205 SPRED2Q7Z698 418 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 USP37Q86T82 979 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 TBC1D1Q86TI0 1168 aaPredicted RBP5.45□□□□□ -1.54
CLIP1-217ENST00000543205 SNX32Q86XE0 403 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 SLC39A11Q8N1S5 342 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 RABGGTAQ92696 567 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 C18orf25Q96B23 403 aaPredicted RBP5.45□□□□□ -1.54
CLIP1-217ENST00000543205 CCDC127Q96BQ5 260 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 TMEM169Q96HH4 297 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 ANKRD36BP1Q96IX9 119 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 SGCZQ96LD1 299 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 MFSD14AQ96MC6 490 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 CDC6Q99741 560 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 TTYH1Q9H313 450 aaPredicted RBP5.45□□□□□ -1.54
CLIP1-217ENST00000543205 PDE11AQ9HCR9 933 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 ANO10Q9NW15 660 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 RWDD2AQ9UIY3 292 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 SH3BP1Q9Y3L3 701 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 C2CD2Q9Y426 696 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 PTPRSQ13332 1948 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 COL4A6Q14031 1691 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 H3BNC9 293 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 PODXLO00592 558 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 TM4SF5O14894 197 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 MAPK13O15264 365 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 SLC16A3O15427 465 aaKnown RBP5.45□□□□□ -1.54
CLIP1-217ENST00000543205 B4GALT3O60512 393 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 CILPO75339 1184 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 AKAP3O75969 853 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 B3GAT3O94766 335 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 TNNC2P02585 160 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 LTFP02788 710 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 ITGB1P05556 798 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 CCDC192P0DO97 292 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 BPIP17213 487 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 MAOBP27338 520 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 CASP4P49662 377 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 CLCNKBP51801 687 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 VAMP7P51809 220 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 APBA1Q02410 837 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 SOX4Q06945 474 aaPredicted RBP5.45□□□□□ -1.54
CLIP1-217ENST00000543205 TBX2Q13207 712 aaPredicted RBP5.45□□□□□ -1.54
CLIP1-217ENST00000543205 NAB2Q15742 525 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 ZBTB6Q15916 424 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 DUOXA2Q1HG44 320 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 CCDC40Q4G0X9 1142 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 SPATA1Q5VX52 437 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 TTI2Q6NXR4 508 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 DCLRE1AQ6PJP8 1040 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 FOXR2Q6PJQ5 311 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 SHISA2Q6UWI4 295 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 INTS8Q75QN2 995 aaKnown RBP5.45□□□□□ -1.54
CLIP1-217ENST00000543205 WDR49Q8IV35 697 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 FAM26EQ8N5C1 309 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 CSGALNACT2Q8N6G5 542 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 GDPD5Q8WTR4 605 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 CCT6BQ92526 530 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 EEF2KMTQ96G04 330 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 IGSF21Q96ID5 467 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 MYCBPQ99417 103 aaPredicted RBP5.45□□□□□ -1.54
CLIP1-217ENST00000543205 CGRRF1Q99675 332 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 PRDM12Q9H4Q4 367 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 IFT22Q9H7X7 185 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 GOLGA2P5Q9HBQ8 144 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 DPP3Q9NY33 737 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 CACNG4Q9UBN1 327 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 STK39Q9UEW8 545 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 TUBGCP4Q9UGJ1 667 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.45□□□□□ -1.54
CLIP1-217ENST00000543205 POLR3KQ9Y2Y1 108 aaPredicted RBP5.45□□□□□ -1.54
CLIP1-217ENST00000543205 NCOR1O75376 2440 aa5.45□□□□□ -1.54
CLIP1-217ENST00000543205 TRBV23-1A0A0A0MS06 115 aa5.44□□□□□ -1.54
CLIP1-217ENST00000543205 A0A1W2PQU0 124 aa5.44□□□□□ -1.54
CLIP1-217ENST00000543205 SYCE3A1L190 88 aa5.44□□□□□ -1.54
CLIP1-217ENST00000543205 EPOPA6NHQ4 379 aa5.44□□□□□ -1.54
CLIP1-217ENST00000543205 M0R3H8 397 aa5.44□□□□□ -1.54
CLIP1-217ENST00000543205 RFXAPO00287 272 aa5.44□□□□□ -1.54
CLIP1-217ENST00000543205 TRAPPC3O43617 180 aa5.44□□□□□ -1.54
CLIP1-217ENST00000543205 STX10O60499 249 aa5.44□□□□□ -1.54
CLIP1-217ENST00000543205 LPXNO60711 386 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms