RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 CFAP69A5D8W1 941 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 LACTBL1A8MY62 500 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 ZNF487B1APH4 448 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 KBTBD13C9JR72 458 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 GPR25O00155 361 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 B4GALT5O43286 388 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 LPXNO60711 386 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 RNF8O76064 485 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 MT-ND3P03897 115 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 NFICP08651 508 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 GSTA2P09210 222 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 DLDP09622 509 aaKnown RBP5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 CXCL8P10145 99 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 MCF2P10911 925 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 VDRP11473 427 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 CYP3A5P20815 502 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 GPD1P21695 349 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 IL4RP24394 825 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 PRKCHP24723 683 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 EPHB2P29323 1055 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 CCNFP41002 786 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 SLC26A2P50443 739 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 ZNF200P98182 395 aaPredicted RBP5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 ROR1Q01973 937 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 CDK18Q07002 472 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 INCA1Q0VD86 236 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 FAAP100Q0VG06 881 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 TFDP2Q14188 446 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 KRT72Q14CN4 511 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 LY6KQ17RY6 165 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 HSDL1Q3SXM5 330 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 KBTBD12Q3ZCT8 623 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 FAM47CQ5HY64 1035 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 TREML2Q5T2D2 321 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 WDR78Q5VTH9 848 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 PRAMEF18Q5VWM3 479 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 PTCRAQ6ISU1 281 aaPredicted RBP5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 LCLAT1Q6UWP7 414 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 MTDHQ86UE4 582 aaKnown RBP5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 TMEM192Q8IY95 271 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 TNS4Q8IZW8 715 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 LRRC71Q8N4P6 559 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 LINC01465Q8N7H1 131 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 PLD5Q8N7P1 536 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 SPATA18Q8TC71 538 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 TEKT4Q8WW24 435 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 APBB2Q92870 758 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 FAF2Q96CS3 445 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 RNF157Q96PX1 679 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 MIPEPQ99797 713 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 TSSK1BQ9BXA7 367 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 TRIM55Q9BYV6 548 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 SPATC1LQ9H0A9 340 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 C12orf65Q9H3J6 166 aaKnown RBP5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 DENND2DQ9H6A0 471 aaPredicted RBP5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 SMYD3Q9H7B4 428 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 MINDY3Q9H8M7 445 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 RPF1Q9H9Y2 349 aaKnown RBP5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 POPDC2Q9HBU9 364 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 GBA2Q9HCG7 927 aaPredicted RBP5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 HMGXB4Q9UGU5 601 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 PCSK1NQ9UHG2 260 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 KIAA1257Q9ULG3 409 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 CHMP2BQ9UQN3 213 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 MTO1Q9Y2Z2 717 aaKnown RBP5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 TTLL3Q9Y4R7 772 aa5.4□□□□□ -1.54
ATPAF1-212ENST00000542495 DNAJC25-GNG10A0A024R161 153 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 IQCA1LA6NCM1 817 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 GOLGA8RI6L899 631 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 TRDMT1O14717 391 aaKnown RBP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 GSC2O15499 205 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 PEX10O60683 326 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 CCDC22O60826 627 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 USP2O75604 605 aaPredicted RBP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 CNMDO75829 334 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 PIAS1O75925 651 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 LMNAP02545 664 aaKnown RBP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 ITGB3P05106 788 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 PFKMP08237 780 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 IQCF3P0C7M6 154 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 STAG3L1P0CL83 205 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 HSPA1AP0DMV8 641 aaKnown RBP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 HSPA1BP0DMV9 641 aaKnown RBP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 TGM2P21980 687 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 MARK3P27448 753 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 WEE1P30291 646 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 MAGEA3P43357 314 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 ARFIP2P53365 341 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 NRLP54845 237 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 CDH6P55285 790 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 YWHAZP63104 245 aaKnown RBP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 BASP1P80723 227 aaKnown RBP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 CDK16Q00536 496 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 TNFAIP2Q03169 654 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 BLMHQ13867 455 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 PDK2Q15119 407 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 SEPT7Q16181 437 aaKnown RBP5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 PKDCCQ504Y2 493 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 SH3PXD2AQ5TCZ1 1133 aa5.39□□□□□ -1.55
ATPAF1-212ENST00000542495 TTC39BQ5VTQ0 682 aaPredicted RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms