RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 BBS2Q9BXC9 721 aa20.94■□□□□ 0.94
DDX11-220ENST00000542244 DUSP16Q9BY84 665 aa20.94■□□□□ 0.94
DDX11-220ENST00000542244 BCCIPQ9P287 314 aaKnown RBP eCLIP20.94■□□□□ 0.94
DDX11-220ENST00000542244 EPG5Q9HCE0 2579 aa20.94■□□□□ 0.94
DDX11-220ENST00000542244 WASH3PC4AMC7 463 aa20.93■□□□□ 0.94
DDX11-220ENST00000542244 TULP2O00295 520 aa20.93■□□□□ 0.94
DDX11-220ENST00000542244 STC2O76061 302 aa20.93■□□□□ 0.94
DDX11-220ENST00000542244 PMLP29590 882 aa20.93■□□□□ 0.94
DDX11-220ENST00000542244 RAD23BP54727 409 aa20.93■□□□□ 0.94
DDX11-220ENST00000542244 CBWD6Q4V339 395 aa20.93■□□□□ 0.94
DDX11-220ENST00000542244 CBWD3Q5JTY5 395 aa20.93■□□□□ 0.94
DDX11-220ENST00000542244 CBWD5Q5RIA9 395 aa20.93■□□□□ 0.94
DDX11-220ENST00000542244 C10orf120Q5SQS8 335 aa20.93■□□□□ 0.94
DDX11-220ENST00000542244 CYP2U1Q7Z449 544 aa20.93■□□□□ 0.94
DDX11-220ENST00000542244 PGBD3Q8N328 593 aa20.93■□□□□ 0.94
DDX11-220ENST00000542244 NAGPAQ9UK23 515 aa20.93■□□□□ 0.94
DDX11-220ENST00000542244 RAD54BQ9Y620 910 aa20.93■□□□□ 0.94
DDX11-220ENST00000542244 USP3Q9Y6I4 520 aa20.93■□□□□ 0.94
DDX11-220ENST00000542244 KMT2BQ9UMN6 2715 aaPredicted RBP20.93■□□□□ 0.94
DDX11-220ENST00000542244 MYO18AQ92614 2054 aaKnown RBP20.93■□□□□ 0.94
DDX11-220ENST00000542244 TNRC6BQ9UPQ9 1833 aaKnown RBP20.92■□□□□ 0.94
DDX11-220ENST00000542244 CACNG3O60359 315 aa20.92■□□□□ 0.94
DDX11-220ENST00000542244 ALDH1A2O94788 518 aa20.92■□□□□ 0.94
DDX11-220ENST00000542244 HMBSP08397 361 aa20.92■□□□□ 0.94
DDX11-220ENST00000542244 PRCPP42785 496 aa20.92■□□□□ 0.94
DDX11-220ENST00000542244 KRT39Q6A163 491 aa20.92■□□□□ 0.94
DDX11-220ENST00000542244 GRAMD4Q6IC98 578 aa20.92■□□□□ 0.94
DDX11-220ENST00000542244 PSAPL1Q6NUJ1 521 aa20.92■□□□□ 0.94
DDX11-220ENST00000542244 HEXIM2Q96MH2 286 aaKnown RBP20.92■□□□□ 0.94
DDX11-220ENST00000542244 POLMQ9NP87 494 aaPredicted RBP20.92■□□□□ 0.94
DDX11-220ENST00000542244 CISHQ9NSE2 258 aa20.92■□□□□ 0.94
DDX11-220ENST00000542244 CLEC4EQ9ULY5 219 aa20.92■□□□□ 0.94
DDX11-220ENST00000542244 CHD8Q9HCK8 2581 aa20.92■□□□□ 0.94
DDX11-220ENST00000542244 ITPKAP23677 461 aa20.91■□□□□ 0.94
DDX11-220ENST00000542244 HSF5Q4G112 596 aaPredicted RBP20.91■□□□□ 0.94
DDX11-220ENST00000542244 BHLHA9Q7RTU4 235 aa20.91■□□□□ 0.94
DDX11-220ENST00000542244 CCDC186Q7Z3E2 898 aa20.91■□□□□ 0.94
DDX11-220ENST00000542244 FMR1NBQ8N0W7 255 aaPredicted RBP20.91■□□□□ 0.94
DDX11-220ENST00000542244 CCDC47Q96A33 483 aaKnown RBP20.91■□□□□ 0.94
DDX11-220ENST00000542244 IMPG2Q9BZV3 1241 aa20.91■□□□□ 0.94
DDX11-220ENST00000542244 SCAND2PQ9GZW5 306 aaPredicted RBP20.91■□□□□ 0.94
DDX11-220ENST00000542244 MARK1Q9P0L2 795 aa20.91■□□□□ 0.94
DDX11-220ENST00000542244 CALCOCO1Q9P1Z2 691 aa20.91■□□□□ 0.94
DDX11-220ENST00000542244 DNMT3LQ9UJW3 386 aa20.91■□□□□ 0.94
DDX11-220ENST00000542244 STARD13Q9Y3M8 1113 aa20.91■□□□□ 0.94
DDX11-220ENST00000542244 PCDHA5Q9Y5H7 936 aa20.91■□□□□ 0.94
DDX11-220ENST00000542244 TRIM49BA6NDI0 452 aa20.9■□□□□ 0.94
DDX11-220ENST00000542244 KHNYNO15037 678 aaKnown RBP20.9■□□□□ 0.94
DDX11-220ENST00000542244 MAP3K13O43283 966 aa20.9■□□□□ 0.94
DDX11-220ENST00000542244 TOP3BO95985 862 aaKnown RBP20.9■□□□□ 0.94
DDX11-220ENST00000542244 HOXB2P14652 356 aa20.9■□□□□ 0.94
DDX11-220ENST00000542244 RPL13P26373 211 aaKnown RBP20.9■□□□□ 0.94
DDX11-220ENST00000542244 MXI1P50539 228 aa20.9■□□□□ 0.94
DDX11-220ENST00000542244 EDRF1Q3B7T1 1238 aa20.9■□□□□ 0.94
DDX11-220ENST00000542244 ANKRD40Q6AI12 368 aa20.9■□□□□ 0.94
DDX11-220ENST00000542244 LPCAT2Q7L5N7 544 aa20.9■□□□□ 0.94
DDX11-220ENST00000542244 PIGZQ86VD9 579 aa20.9■□□□□ 0.94
DDX11-220ENST00000542244 PNPLA8Q9NP80 782 aa20.9■□□□□ 0.94
DDX11-220ENST00000542244 RAB20Q9NX57 234 aa20.9■□□□□ 0.94
DDX11-220ENST00000542244 CACNA2D2Q9NY47 1150 aa20.9■□□□□ 0.94
DDX11-220ENST00000542244 RASAL2Q9UJF2 1139 aa20.9■□□□□ 0.94
DDX11-220ENST00000542244 MAP1BP46821 2468 aaKnown RBP20.89■□□□□ 0.94
DDX11-220ENST00000542244 CALCAP01258 141 aa20.89■□□□□ 0.93
DDX11-220ENST00000542244 NDUFV2P19404 249 aa20.89■□□□□ 0.93
DDX11-220ENST00000542244 NTSR1P30989 418 aa20.89■□□□□ 0.93
DDX11-220ENST00000542244 GTF2H1P32780 548 aa20.89■□□□□ 0.93
DDX11-220ENST00000542244 PLA2G4AP47712 749 aa20.89■□□□□ 0.93
DDX11-220ENST00000542244 ENPEPQ07075 957 aa20.89■□□□□ 0.93
DDX11-220ENST00000542244 EFEMP1Q12805 493 aa20.89■□□□□ 0.93
DDX11-220ENST00000542244 KLHDC10Q6PID8 442 aa20.89■□□□□ 0.93
DDX11-220ENST00000542244 FBXL13Q8NEE6 735 aa20.89■□□□□ 0.93
DDX11-220ENST00000542244 DDX1Q92499 740 aaKnown RBP20.89■□□□□ 0.93
DDX11-220ENST00000542244 TMEM176AQ96HP8 235 aa20.89■□□□□ 0.93
DDX11-220ENST00000542244 TRIM61Q5EBN2 209 aa20.88■□□□□ 0.93
DDX11-220ENST00000542244 RAB41Q5JT25 222 aa20.88■□□□□ 0.93
DDX11-220ENST00000542244 FYB2Q5VWT5 728 aa20.88■□□□□ 0.93
DDX11-220ENST00000542244 C11orf74Q86VG3 221 aa20.88■□□□□ 0.93
DDX11-220ENST00000542244 ZC3H3Q8IXZ2 948 aaKnown RBP20.88■□□□□ 0.93
DDX11-220ENST00000542244 ENGASEQ8NFI3 743 aa20.88■□□□□ 0.93
DDX11-220ENST00000542244 IPO4Q8TEX9 1081 aaKnown RBP20.88■□□□□ 0.93
DDX11-220ENST00000542244 LSM7Q9UK45 103 aaKnown RBP20.88■□□□□ 0.93
DDX11-220ENST00000542244 FBXO10Q9UK96 956 aa20.88■□□□□ 0.93
DDX11-220ENST00000542244 IGHV1OR15-9A0A0B4J2B8 117 aa20.87■□□□□ 0.93
DDX11-220ENST00000542244 GABBR2O75899 941 aa20.87■□□□□ 0.93
DDX11-220ENST00000542244 SPINK2P20155 84 aa20.87■□□□□ 0.93
DDX11-220ENST00000542244 MAPK8P45983 427 aa20.87■□□□□ 0.93
DDX11-220ENST00000542244 DGKGP49619 791 aa20.87■□□□□ 0.93
DDX11-220ENST00000542244 NOVA1P51513 510 aaKnown RBP20.87■□□□□ 0.93
DDX11-220ENST00000542244 LRMPQ12912 555 aa20.87■□□□□ 0.93
DDX11-220ENST00000542244 GEN1Q17RS7 908 aa20.87■□□□□ 0.93
DDX11-220ENST00000542244 GOLGA7BQ2TAP0 167 aa20.87■□□□□ 0.93
DDX11-220ENST00000542244 UAP1L1Q3KQV9 507 aa20.87■□□□□ 0.93
DDX11-220ENST00000542244 DCAF17Q5H9S7 520 aaPredicted RBP20.87■□□□□ 0.93
DDX11-220ENST00000542244 SH3PXD2AQ5TCZ1 1133 aa20.87■□□□□ 0.93
DDX11-220ENST00000542244 ARHGAP17Q68EM7 881 aa20.87■□□□□ 0.93
DDX11-220ENST00000542244 ISM2Q6H9L7 571 aa20.87■□□□□ 0.93
DDX11-220ENST00000542244 SLC41A1Q8IVJ1 513 aa20.87■□□□□ 0.93
DDX11-220ENST00000542244 CHPFQ8IZ52 775 aa20.87■□□□□ 0.93
DDX11-220ENST00000542244 OR2I1PQ8NGU4 316 aa20.87■□□□□ 0.93
DDX11-220ENST00000542244 SPACA7Q96KW9 195 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms