RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 OR8K3Q8NH51 312 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 VANGL1Q8TAA9 524 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-218ENST00000541615 TTC8Q8TAM2 541 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 FAM172AQ8WUF8 416 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 IPCEF1Q8WWN9 437 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-218ENST00000541615 NELL1Q92832 810 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 PMEPA1Q969W9 287 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 SLC7A6OSQ96CW6 309 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-218ENST00000541615 APOPT1Q96IL0 206 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 NSL1Q96IY1 281 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 ZC3H10Q96K80 434 aaKnown RBP5.36□□□□□ -1.55
SNHG1-218ENST00000541615 PHACTR3Q96KR7 559 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 AK8Q96MA6 479 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 ZNF560Q96MR9 790 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 DNAJC7Q99615 494 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 SLC29A1Q99808 456 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.36□□□□□ -1.554e-59■■■□□ 16.1
SNHG1-218ENST00000541615 NUP85Q9BW27 656 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 CINPQ9BW66 212 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-218ENST00000541615 TEKT3Q9BXF9 490 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 TEX13BQ9BXU2 312 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 PITPNM3Q9BZ71 974 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 LHX5Q9H2C1 402 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 ATP13A3Q9H7F0 1226 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 CAB39LQ9H9S4 337 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 SIAEQ9HAT2 523 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 SP110Q9HB58 689 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 PCDH12Q9NPG4 1184 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 TBC1D22BQ9NU19 505 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 ZNF624Q9P2J8 865 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-218ENST00000541615 GMPR2Q9P2T1 348 aaKnown RBP5.36□□□□□ -1.55
SNHG1-218ENST00000541615 PPARGC1AQ9UBK2 798 aaKnown RBP5.36□□□□□ -1.55
SNHG1-218ENST00000541615 ADD3Q9UEY8 706 aaKnown RBP5.36□□□□□ -1.55
SNHG1-218ENST00000541615 PRKAG2Q9UGJ0 569 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 ADGRE2Q9UHX3 823 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 ZBTB21Q9ULJ3 1066 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 CNOT6Q9ULM6 557 aaKnown RBP5.36□□□□□ -1.55
SNHG1-218ENST00000541615 SPG7Q9UQ90 795 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 EIF3LQ9Y262 564 aaKnown RBP5.36□□□□□ -1.55
SNHG1-218ENST00000541615 KLF2Q9Y5W3 355 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-218ENST00000541615 MAST3O60307 1309 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 SALL1Q9NSC2 1324 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 CARMIL3Q8ND23 1372 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 DISP3Q9P2K9 1392 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 NSD3Q9BZ95 1437 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 MAGI2Q86UL8 1455 aa5.36□□□□□ -1.55
SNHG1-218ENST00000541615 MAGI1Q96QZ7 1491 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-218ENST00000541615 TRPM1Q7Z4N2 1603 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 A0A0A6YYJ9 748 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 A0A0G2JPF8 293 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 A0A1W2PQ72 361 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 A0A1W2PRG6 482 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 TTC24A2A3L6 582 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-218ENST00000541615 ZNF98A6NK75 572 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 NUTM2BA6NNL0 878 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-218ENST00000541615 NUTM2EB1AL46 878 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-218ENST00000541615 HNRNPCL3B7ZW38 293 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 PRRT4C9JH25 899 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 SLCO1B7G3V0H7 640 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 H3BM21 787 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 hCG_2039718K7EN88 272 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 SGK1O00141 431 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 WRBO00258 174 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 PDE2AO00408 941 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-218ENST00000541615 PLK4O00444 970 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 TXNDC9O14530 226 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 SLC22A2O15244 555 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 GSC2O15499 205 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 HOXC11O43248 304 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-218ENST00000541615 ARHGEF9O43307 516 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 PALMO75781 387 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 PGM3O95394 542 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 HRGP04196 525 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 SRGAP2CP0DJJ0 459 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 SMIM18P0DKX4 95 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 HNRNPCL4P0DMR1 293 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 PDGFRAP16234 1089 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 ATF4P18848 351 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-218ENST00000541615 PON1P27169 355 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 MAOBP27338 520 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 NOS3P29474 1203 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 CIITAP33076 1130 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 SOX6P35712 828 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 SERPINB5P36952 375 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 ARL1P40616 181 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-218ENST00000541615 PPP1R2P41236 205 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 RAP1GAPP47736 663 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 ALDH3B2P48448 385 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 HCAR3P49019 387 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 FXR1P51114 621 aaKnown RBP eCLIP5.35□□□□□ -1.55
SNHG1-218ENST00000541615 COPB1P53618 953 aaKnown RBP5.35□□□□□ -1.55
SNHG1-218ENST00000541615 SLC5A3P53794 718 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 DRG2P55039 364 aaKnown RBP5.35□□□□□ -1.55
SNHG1-218ENST00000541615 DCDC1P59894 354 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 ACTR3P61158 418 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 UBE2IP63279 158 aaKnown RBP5.35□□□□□ -1.55
SNHG1-218ENST00000541615 IFITM2Q01629 132 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 COTL1Q14019 142 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 DMC1Q14565 340 aa5.35□□□□□ -1.55
SNHG1-218ENST00000541615 KCNAB1Q14722 419 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms