RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 GUCY2DQ02846 1103 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 SMARCB1Q12824 385 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 KLF1Q13351 362 aaPredicted RBP9.05□□□□□ -0.96
THBS3-210ENST00000541576 BOLA3Q53S33 107 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 PM20D1Q6GTS8 502 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 COLGALT1Q8NBJ5 622 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 SCAMP5Q8TAC9 235 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 C1orf54Q8WWF1 131 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 HSPH1Q92598 858 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 N4BP2L2Q92802 583 aaPredicted RBP9.05□□□□□ -0.96
THBS3-210ENST00000541576 TBCBQ99426 244 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 EPB41L5Q9HCM4 733 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 HPCAL4Q9UM19 191 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 CDY1Q9Y6F8 540 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 USP3Q9Y6I4 520 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 LAMA2P24043 3122 aaKnown RBP9.05□□□□□ -0.96
THBS3-210ENST00000541576 PHF2O75151 1096 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 GJB5O95377 273 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 LTFP02788 710 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 SOD2P04179 222 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 KCNJ1P48048 391 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 IFRD2Q12894 506 aaPredicted RBP9.05□□□□□ -0.96
THBS3-210ENST00000541576 PSMD5Q16401 504 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 CYP1B1Q16678 543 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 TFDP3Q5H9I0 405 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 PSRC1Q6PGN9 363 aaPredicted RBP9.05□□□□□ -0.96
THBS3-210ENST00000541576 STRADAQ7RTN6 431 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 SCML4Q8N228 414 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 KCTD6Q8NC69 237 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 CMASQ8NFW8 434 aaPredicted RBP9.05□□□□□ -0.96
THBS3-210ENST00000541576 CCDC26Q8TAB7 109 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 SPPL2BQ8TCT7 592 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 ATG4AQ8WYN0 398 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 PIK3R5Q8WYR1 880 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 C8orf48Q96LL4 319 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 GDF3Q9NR23 364 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 CHST7Q9NS84 486 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.05□□□□□ -0.96
THBS3-210ENST00000541576 SPG21Q9NZD8 308 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 BCCIPQ9P287 314 aaKnown RBP eCLIP9.05□□□□□ -0.96
THBS3-210ENST00000541576 MTRRQ9UBK8 725 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 NAALADL1Q9UQQ1 740 aa9.05□□□□□ -0.96
THBS3-210ENST00000541576 MTMR11A4FU01 709 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 TNFRSF10BO14763 440 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 FYNP06241 537 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 CD48P09326 243 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 KDELR1P24390 212 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 MCM3P25205 808 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 CHRNA3P32297 505 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 PTPN7P35236 360 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 CDKN2BP42772 138 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 PTGIRP43119 386 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 CARSP49589 748 aaKnown RBP9.04□□□□□ -0.96
THBS3-210ENST00000541576 SEC24CP53992 1094 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 ATXN1P54253 815 aaKnown RBP9.04□□□□□ -0.96
THBS3-210ENST00000541576 IFT88Q13099 833 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 DDR2Q16832 855 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 SYPL2Q5VXT5 272 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 KAZNQ674X7 775 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 BHLHA9Q7RTU4 235 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 MAATS1Q7Z4T9 603 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 FBXO22Q8NEZ5 403 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 HNRNPLLQ8WVV9 542 aaKnown RBP9.04□□□□□ -0.96
THBS3-210ENST00000541576 CASKIN2Q8WXE0 1202 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 IFT81Q8WYA0 676 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 NT5C3BQ969T7 300 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 FAM118BQ9BPY3 351 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 MED4Q9NPJ6 270 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 BACE2Q9Y5Z0 518 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 CEP290O15078 2479 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 PATJQ8NI35 1801 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 hCG_1818297A0A087WSY0 165 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 BHMG1C9JSJ3 638 aaPredicted RBP9.04□□□□□ -0.96
THBS3-210ENST00000541576 C2CD2LO14523 706 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 TJP3O95049 919 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 KRT14P02533 472 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 NCAM1P13591 858 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 EPHB4P54760 987 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 PITX1P78337 314 aaPredicted RBP9.04□□□□□ -0.96
THBS3-210ENST00000541576 GUCY1A3Q02108 690 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 TMEM240Q5SV17 173 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 SDHAF4Q5VUM1 108 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 SLC8B1Q6J4K2 584 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 RNF19BQ6ZMZ0 732 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 DDX42Q86XP3 938 aaKnown RBP eCLIP9.04□□□□□ -0.96
THBS3-210ENST00000541576 C2orf15Q8WU43 125 aaKnown RBP9.04□□□□□ -0.96
THBS3-210ENST00000541576 TEKT4Q8WW24 435 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 RUBCNQ92622 972 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 ARL8AQ96BM9 186 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 NPY6RQ99463 290 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 TRIM51Q9BSJ1 452 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 ZBED2Q9BTP6 218 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 PPANQ9NQ55 473 aaKnown RBP9.04□□□□□ -0.96
THBS3-210ENST00000541576 AAASQ9NRG9 546 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.04□□□□□ -0.96
THBS3-210ENST00000541576 CXXC1Q9P0U4 656 aaPredicted RBP9.04□□□□□ -0.96
THBS3-210ENST00000541576 PTPRSQ13332 1948 aa9.04□□□□□ -0.96
THBS3-210ENST00000541576 M0QYT0 321 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 SYN1P17600 705 aa9.03□□□□□ -0.96
THBS3-210ENST00000541576 RPL17P18621 184 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms