RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 NFIXQ14938 502 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 TXNRD1Q16881 649 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 SHROOM1Q2M3G4 852 aaPredicted RBP5.89□□□□□ -1.47
DDB1-219ENST00000541513 TYSND1Q2T9J0 566 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.89□□□□□ -1.47
DDB1-219ENST00000541513 KBTBD12Q3ZCT8 623 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 RRAGBQ5VZM2 374 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 MTFR2Q6P444 385 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 ZNF790Q6PG37 636 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 UNQ6494/PRO21346Q6UXR6 183 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 IKBIPQ70UQ0 350 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 KCTD1Q719H9 257 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 PPP1R3BQ86XI6 285 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 FAM90A1Q86YD7 464 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 WDR63Q8IWG1 891 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 SMYD4Q8IYR2 804 aaPredicted RBP5.89□□□□□ -1.47
DDB1-219ENST00000541513 C17orf53Q8N3J3 647 aaPredicted RBP5.89□□□□□ -1.47
DDB1-219ENST00000541513 DPP10Q8N608 796 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 POMGNT2Q8NAT1 580 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 ZBTB44Q8NCP5 570 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 CHST13Q8NET6 341 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 ATP6V0A1Q93050 837 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 SYAP1Q96A49 352 aaPredicted RBP5.89□□□□□ -1.47
DDB1-219ENST00000541513 CDCA5Q96FF9 252 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 PTCHD1Q96NR3 888 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 RAB3IPQ96QF0 476 aaPredicted RBP5.89□□□□□ -1.47
DDB1-219ENST00000541513 TUBGCP5Q96RT8 1024 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 VRK1Q99986 396 aaPredicted RBP5.89□□□□□ -1.47
DDB1-219ENST00000541513 THUMPD2Q9BTF0 503 aaKnown RBP5.89□□□□□ -1.47
DDB1-219ENST00000541513 MRPL46Q9H2W6 279 aaKnown RBP5.89□□□□□ -1.47
DDB1-219ENST00000541513 SUGCTQ9HAC7 445 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 PIDD1Q9HB75 910 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 MKNK2Q9HBH9 465 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 TAB2Q9NYJ8 693 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 PCSK1NQ9UHG2 260 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 KCNH3Q9ULD8 1083 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 DAPP1Q9UN19 280 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 AP4E1Q9UPM8 1137 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 CAMK2AQ9UQM7 478 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 PCDHA1Q9Y5I3 950 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 HEG1Q9ULI3 1381 aa5.89□□□□□ -1.47
DDB1-219ENST00000541513 MEGF11A6BM72 1044 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 KRT87PA6NCN2 255 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 SAC3D1A6NKF1 404 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 C2orf81A6NN90 581 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 H0YAE9 185 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 PYCARD-AS1I3L0S3 204 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 PCDH17O14917 1159 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 STX6O43752 255 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 PHF2O75151 1096 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 NTSR2O95665 410 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 OLFM2O95897 454 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 PNPP00491 289 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 UBL4AP11441 157 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 TNNT1P13805 278 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 PTPN1P18031 435 aaKnown RBP5.88□□□□□ -1.47
DDB1-219ENST00000541513 KCNA5P22460 613 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 CYP7A1P22680 504 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 IL1R2P27930 398 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 PRDX5P30044 214 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 RFC1P35251 1148 aaPredicted RBP5.88□□□□□ -1.47
DDB1-219ENST00000541513 PGM1P36871 562 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 PAFAH1B1P43034 410 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 SOX8P57073 446 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 YBEYP58557 167 aaPredicted RBP5.88□□□□□ -1.47
DDB1-219ENST00000541513 RPP30P78346 268 aaKnown RBP5.88□□□□□ -1.47
DDB1-219ENST00000541513 CTBSQ01459 385 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 TARDBPQ13148 414 aaKnown RBP eCLIP5.88□□□□□ -1.47
DDB1-219ENST00000541513 AIMP2Q13155 320 aaKnown RBP5.88□□□□□ -1.47
DDB1-219ENST00000541513 SLC39A6Q13433 755 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 RAB32Q13637 225 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 TNFAIP1Q13829 316 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 OASLQ15646 514 aaKnown RBP5.88□□□□□ -1.47
DDB1-219ENST00000541513 EZH2Q15910 746 aaKnown RBP5.88□□□□□ -1.47
DDB1-219ENST00000541513 ALG11Q2TAA5 492 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 UTP14CQ5TAP6 766 aaKnown RBP5.88□□□□□ -1.47
DDB1-219ENST00000541513 PET117Q6UWS5 81 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.88□□□□□ -1.47
DDB1-219ENST00000541513 DEFB132Q7Z7B7 95 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.88□□□□□ -1.47
DDB1-219ENST00000541513 MON1AQ86VX9 555 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 CILP2Q8IUL8 1156 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 RHOT1Q8IXI2 618 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 TTC5Q8N0Z6 440 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 AGGF1Q8N302 714 aaeCLIP5.88□□□□□ -1.47
DDB1-219ENST00000541513 DENND6BQ8NEG7 585 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 ANKRD20A12PQ8NF67 263 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 CTCFLQ8NI51 663 aaPredicted RBP5.88□□□□□ -1.47
DDB1-219ENST00000541513 FIBINQ8TAL6 211 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 PIP4K2CQ8TBX8 421 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 IFI44Q8TCB0 444 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 SCFD2Q8WU76 684 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 ASB15Q8WXK1 588 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 VPS33AQ96AX1 596 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 VPS39Q96JC1 886 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 Q96M66 194 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 RUNDC3BQ96NL0 473 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 FOXB1Q99853 325 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 NTPCRQ9BSD7 190 aaKnown RBP5.88□□□□□ -1.47
DDB1-219ENST00000541513 POLR3CQ9BUI4 534 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms