RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 ABI2Q9NYB9 513 aaPredicted RBP12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 EFR3BQ9Y2G0 817 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 MYO16Q9Y6X6 1858 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 H0YGN5 161 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 M0QYT0 321 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 TNFRSF10BO14763 440 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 POLR3GO15318 223 aaPredicted RBP12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 PPFIA2O75334 1257 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 FBXO21O94952 628 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 LTFP02788 710 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 FGFR3P22607 806 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 PAX3P23760 479 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 GJA8P48165 433 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 ITGA8P53708 1063 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 DHX9Q08211 1270 aaKnown RBP12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 IFRD2Q12894 506 aaPredicted RBP12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 NME3Q13232 169 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 PM20D1Q6GTS8 502 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 FUT10Q6P4F1 479 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 STRADAQ7RTN6 431 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 SPATA2LQ8IUW3 424 aaPredicted RBP12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 UNC45BQ8IWX7 931 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 CCDC33Q8N5R6 958 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 SLC7A14Q8TBB6 771 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 FAF2Q96CS3 445 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 CRISPLD1Q9H336 500 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 WDR6Q9NNW5 1121 aaKnown RBP12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 HOMER3Q9NSC5 361 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 FZD10Q9ULW2 581 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 ZNF148Q9UQR1 794 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 FAN1Q9Y2M0 1017 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 SNX10Q9Y5X0 201 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 NFS1Q9Y697 457 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 USP3Q9Y6I4 520 aa12.78□□□□□ -0.36
AP003559.1-201ENST00000540906 KIAA0100Q14667 2235 aaKnown RBP12.77□□□□□ -0.36
AP003559.1-201ENST00000540906 PTPRSQ13332 1948 aa12.77□□□□□ -0.36
AP003559.1-201ENST00000540906 GOLGA6BA6NDN3 693 aa12.77□□□□□ -0.37
AP003559.1-201ENST00000540906 DEFB103AP81534 67 aa12.77□□□□□ -0.37
AP003559.1-201ENST00000540906 SLC10A2Q12908 348 aaPredicted RBP12.77□□□□□ -0.37
AP003559.1-201ENST00000540906 DPYSL2Q16555 572 aa12.77□□□□□ -0.37
AP003559.1-201ENST00000540906 DDR2Q16832 855 aa12.77□□□□□ -0.37
AP003559.1-201ENST00000540906 ATAD1Q8NBU5 361 aa12.77□□□□□ -0.37
AP003559.1-201ENST00000540906 GRK7Q8WTQ7 553 aa12.77□□□□□ -0.37
AP003559.1-201ENST00000540906 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.77□□□□□ -0.37
AP003559.1-201ENST00000540906 ARL8AQ96BM9 186 aa12.77□□□□□ -0.37
AP003559.1-201ENST00000540906 ADAM7Q9H2U9 754 aa12.77□□□□□ -0.37
AP003559.1-201ENST00000540906 C11orf49Q9H6J7 331 aa12.77□□□□□ -0.37
AP003559.1-201ENST00000540906 CWH43Q9H720 699 aa12.77□□□□□ -0.37
AP003559.1-201ENST00000540906 DNAJC17Q9NVM6 304 aaKnown RBP12.77□□□□□ -0.37
AP003559.1-201ENST00000540906 CWC15Q9P013 229 aaKnown RBP12.77□□□□□ -0.37
AP003559.1-201ENST00000540906 PLAAQ9Y263 795 aa12.77□□□□□ -0.37
AP003559.1-201ENST00000540906 DRG1Q9Y295 367 aaKnown RBP12.77□□□□□ -0.37
AP003559.1-201ENST00000540906 ATP8A1Q9Y2Q0 1164 aa12.77□□□□□ -0.37
AP003559.1-201ENST00000540906 FAM72CH0Y354 149 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 APOC4-APOC2K7ER74 178 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 ADAM12O43184 909 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 GAS8O95995 478 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 APOC2P02655 101 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 ALDH2P05091 517 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 ITGAVP06756 1048 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 CLTBP09497 229 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 NCAM1P13591 858 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 ATF2P15336 505 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 GOT1P17174 413 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 RDXP35241 583 aaKnown RBP12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 GRIK1P39086 918 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 ADCY8P40145 1251 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 SLC5A3P53794 718 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 ARPP19P56211 112 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 EIF3EP60228 445 aaKnown RBP12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 PDK2Q15119 407 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 NOMO1Q15155 1222 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 CTXN3Q4LDR2 81 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 FAM72AQ5TYM5 149 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 IZUMO3Q5VZ72 239 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 SLC9A4Q6AI14 798 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 FAM72DQ6L9T8 149 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 FAM117BQ6P1L5 589 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 PRSS55Q6UWB4 352 aaPredicted RBP12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 SYDE1Q6ZW31 735 aaPredicted RBP12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 GSTA5Q7RTV2 222 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 SCD5Q86SK9 330 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 FAM72BQ86X60 149 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 SCN4BQ8IWT1 228 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 TAB3Q8N5C8 712 aaPredicted RBP12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 GPR152Q8TDT2 470 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 SNF8Q96H20 258 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 CSPG4P5Q96PW8 444 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 SH3GL2Q99962 352 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 TMEM106CQ9BVX2 250 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 COLEC11Q9BWP8 271 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 NMUR1Q9HB89 426 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 WHRNQ9P202 907 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 SYN3O14994 580 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 TBC1D4O60343 1298 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 CAPN15O75808 1086 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 EFEMP2O95967 443 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 CSF2RAP15509 400 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 AMPD1P23109 780 aa12.76□□□□□ -0.37
AP003559.1-201ENST00000540906 HOXD11P31277 338 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms