RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 CRY1Q16526 586 aa9.47□□□□□ -0.89
LMO3-222ENST00000540445 CSRP2Q16527 193 aa9.47□□□□□ -0.89
LMO3-222ENST00000540445 CAMK4Q16566 473 aa9.47□□□□□ -0.89
LMO3-222ENST00000540445 GOLGA7BQ2TAP0 167 aa9.47□□□□□ -0.89
LMO3-222ENST00000540445 USP39Q53GS9 565 aaKnown RBP9.47□□□□□ -0.89
LMO3-222ENST00000540445 EOGTQ5NDL2 527 aa9.47□□□□□ -0.89
LMO3-222ENST00000540445 ANO7Q6IWH7 933 aa9.47□□□□□ -0.89
LMO3-222ENST00000540445 TTI2Q6NXR4 508 aa9.47□□□□□ -0.89
LMO3-222ENST00000540445 KLHDC10Q6PID8 442 aa9.47□□□□□ -0.89
LMO3-222ENST00000540445 TMEM270Q6UE05 265 aa9.47□□□□□ -0.89
LMO3-222ENST00000540445 PRR23CQ6ZRP0 262 aa9.47□□□□□ -0.89
LMO3-222ENST00000540445 CCDC186Q7Z3E2 898 aa9.47□□□□□ -0.89
LMO3-222ENST00000540445 SFTPA1Q8IWL2 248 aa9.47□□□□□ -0.89
LMO3-222ENST00000540445 ARHGAP18Q8N392 663 aa9.47□□□□□ -0.89
LMO3-222ENST00000540445 PPM1KQ8N3J5 372 aa9.47□□□□□ -0.89
LMO3-222ENST00000540445 ALLCQ8N6M5 410 aa9.47□□□□□ -0.89
LMO3-222ENST00000540445 TXNDC5Q8NBS9 432 aaKnown RBP9.47□□□□□ -0.89
LMO3-222ENST00000540445 UBA3Q8TBC4 463 aa9.47□□□□□ -0.89
LMO3-222ENST00000540445 LOXL4Q96JB6 756 aa9.47□□□□□ -0.89
LMO3-222ENST00000540445 ZC3H10Q96K80 434 aaKnown RBP9.47□□□□□ -0.89
LMO3-222ENST00000540445 NT5C1BQ96P26 610 aa9.47□□□□□ -0.89
LMO3-222ENST00000540445 IPO9Q96P70 1041 aaKnown RBP9.47□□□□□ -0.89
LMO3-222ENST00000540445 DUSP9Q99956 384 aaKnown RBP9.47□□□□□ -0.89
LMO3-222ENST00000540445 RTKNQ9BST9 563 aa9.47□□□□□ -0.89
LMO3-222ENST00000540445 SRRTQ9BXP5 876 aaKnown RBP9.47□□□□□ -0.89
LMO3-222ENST00000540445 TPSD1Q9BZJ3 242 aa9.47□□□□□ -0.89
LMO3-222ENST00000540445 POLMQ9NP87 494 aaPredicted RBP9.47□□□□□ -0.89
LMO3-222ENST00000540445 ZDHHC4Q9NPG8 344 aa9.47□□□□□ -0.89
LMO3-222ENST00000540445 CLIC5Q9NZA1 410 aa9.47□□□□□ -0.89
LMO3-222ENST00000540445 BCCIPQ9P287 314 aaKnown RBP eCLIP9.47□□□□□ -0.89
LMO3-222ENST00000540445 WDR35Q9P2L0 1181 aa9.47□□□□□ -0.89
LMO3-222ENST00000540445 EBF1Q9UH73 591 aa9.47□□□□□ -0.89
LMO3-222ENST00000540445 RASAL2Q9UJF2 1139 aa9.47□□□□□ -0.89
LMO3-222ENST00000540445 TSPAN16Q9UKR8 245 aa9.47□□□□□ -0.89
LMO3-222ENST00000540445 KIAA1257Q9ULG3 409 aa9.47□□□□□ -0.89
LMO3-222ENST00000540445 MMP17Q9ULZ9 603 aa9.47□□□□□ -0.89
LMO3-222ENST00000540445 PCDHB4Q9Y5E5 795 aa9.47□□□□□ -0.89
LMO3-222ENST00000540445 USP3Q9Y6I4 520 aa9.47□□□□□ -0.89
LMO3-222ENST00000540445 NCOR2Q9Y618 2525 aa9.47□□□□□ -0.89
LMO3-222ENST00000540445 ADAMTS9Q9P2N4 1935 aa9.46□□□□□ -0.89
LMO3-222ENST00000540445 CNOT1A5YKK6 2376 aaKnown RBP9.46□□□□□ -0.89
LMO3-222ENST00000540445 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.46□□□□□ -0.9
LMO3-222ENST00000540445 SLC30A4O14863 429 aa9.46□□□□□ -0.9
LMO3-222ENST00000540445 DCLK1O15075 740 aa9.46□□□□□ -0.9
LMO3-222ENST00000540445 ZBTB24O43167 697 aaPredicted RBP9.46□□□□□ -0.9
LMO3-222ENST00000540445 STC2O76061 302 aa9.46□□□□□ -0.9
LMO3-222ENST00000540445 RHOBTB1O94844 696 aa9.46□□□□□ -0.9
LMO3-222ENST00000540445 EPN2O95208 641 aa9.46□□□□□ -0.9
LMO3-222ENST00000540445 GNA14O95837 355 aa9.46□□□□□ -0.9
LMO3-222ENST00000540445 ZBED1O96006 694 aa9.46□□□□□ -0.9
LMO3-222ENST00000540445 VDRP11473 427 aa9.46□□□□□ -0.9
LMO3-222ENST00000540445 TYRP14679 529 aa9.46□□□□□ -0.9
LMO3-222ENST00000540445 BMP6P22004 513 aa9.46□□□□□ -0.9
LMO3-222ENST00000540445 CHKAP35790 457 aa9.46□□□□□ -0.9
LMO3-222ENST00000540445 BCAT1P54687 386 aa9.46□□□□□ -0.9
LMO3-222ENST00000540445 YWHAGP61981 247 aaKnown RBP eCLIP9.46□□□□□ -0.9
LMO3-222ENST00000540445 UBE2HP62256 183 aa9.46□□□□□ -0.9
LMO3-222ENST00000540445 PDE4CQ08493 712 aa9.46□□□□□ -0.9
LMO3-222ENST00000540445 MESP2Q0VG99 397 aa9.46□□□□□ -0.9
LMO3-222ENST00000540445 KCNH2Q12809 1159 aa9.46□□□□□ -0.9
LMO3-222ENST00000540445 PAK1Q13153 545 aa9.46□□□□□ -0.9
LMO3-222ENST00000540445 ELF2Q15723 593 aa9.46□□□□□ -0.9
LMO3-222ENST00000540445 CCDC6Q16204 474 aa9.46□□□□□ -0.9
LMO3-222ENST00000540445 HSF5Q4G112 596 aaPredicted RBP9.46□□□□□ -0.9
LMO3-222ENST00000540445 C10orf76Q5T2E6 689 aa9.46□□□□□ -0.9
LMO3-222ENST00000540445 SDE2Q6IQ49 451 aa9.46□□□□□ -0.9
LMO3-222ENST00000540445 TMEM92Q6UXU6 159 aa9.46□□□□□ -0.9
LMO3-222ENST00000540445 RRAGAQ7L523 313 aa9.46□□□□□ -0.9
LMO3-222ENST00000540445 SCD5Q86SK9 330 aa9.46□□□□□ -0.9
LMO3-222ENST00000540445 ZNF276Q8N554 614 aa9.46□□□□□ -0.9
LMO3-222ENST00000540445 ZNF513Q8N8E2 541 aaPredicted RBP9.46□□□□□ -0.9
LMO3-222ENST00000540445 C12orf50Q8NA57 414 aaPredicted RBP9.46□□□□□ -0.9
LMO3-222ENST00000540445 IL17RCQ8NAC3 791 aa9.46□□□□□ -0.9
LMO3-222ENST00000540445 BHMTQ93088 406 aa9.46□□□□□ -0.9
LMO3-222ENST00000540445 DNAJC17Q9NVM6 304 aaKnown RBP9.46□□□□□ -0.9
LMO3-222ENST00000540445 MARCH2Q9P0N8 246 aa9.46□□□□□ -0.9
LMO3-222ENST00000540445 STRIP2Q9ULQ0 834 aa9.46□□□□□ -0.9
LMO3-222ENST00000540445 ZNF510Q9Y2H8 683 aa9.46□□□□□ -0.9
LMO3-222ENST00000540445 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.46□□□□□ -0.9
LMO3-222ENST00000540445 SLC12A8A0AV02 714 aa9.45□□□□□ -0.9
LMO3-222ENST00000540445 DCDC2BA2VCK2 349 aa9.45□□□□□ -0.9
LMO3-222ENST00000540445 SGK1O00141 431 aa9.45□□□□□ -0.9
LMO3-222ENST00000540445 TULP2O00295 520 aa9.45□□□□□ -0.9
LMO3-222ENST00000540445 XPO1O14980 1071 aaKnown RBP9.45□□□□□ -0.9
LMO3-222ENST00000540445 PMM2O15305 246 aa9.45□□□□□ -0.9
LMO3-222ENST00000540445 P4HA2O15460 535 aa9.45□□□□□ -0.9
LMO3-222ENST00000540445 HOXC11O43248 304 aaPredicted RBP9.45□□□□□ -0.9
LMO3-222ENST00000540445 MAP3K13O43283 966 aa9.45□□□□□ -0.9
LMO3-222ENST00000540445 FOXD2O60548 495 aaPredicted RBP9.45□□□□□ -0.9
LMO3-222ENST00000540445 LCP1P13796 627 aa9.45□□□□□ -0.9
LMO3-222ENST00000540445 KIR2DL1P43626 348 aaPredicted RBP9.45□□□□□ -0.9
LMO3-222ENST00000540445 CREB5Q02930 508 aa9.45□□□□□ -0.9
LMO3-222ENST00000540445 ADIGQ0VDE8 80 aa9.45□□□□□ -0.9
LMO3-222ENST00000540445 BST2Q10589 180 aaKnown RBP9.45□□□□□ -0.9
LMO3-222ENST00000540445 PLK5Q496M5 336 aa9.45□□□□□ -0.9
LMO3-222ENST00000540445 AASDHQ4L235 1098 aaPredicted RBP9.45□□□□□ -0.9
LMO3-222ENST00000540445 RAB41Q5JT25 222 aa9.45□□□□□ -0.9
LMO3-222ENST00000540445 PLA2G2CQ5R387 149 aa9.45□□□□□ -0.9
LMO3-222ENST00000540445 GRAMD4Q6IC98 578 aa9.45□□□□□ -0.9
LMO3-222ENST00000540445 TRMT11Q7Z4G4 463 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms