RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 MAMDC4Q6UXC1 1216 aa14.6□□□□□ -0.07
UBE3B-210ENST00000539599 UNC5AQ6ZN44 842 aa14.6□□□□□ -0.07
UBE3B-210ENST00000539599 DENND5BQ6ZUT9 1274 aa14.6□□□□□ -0.07
UBE3B-210ENST00000539599 ZNF534Q76KX8 674 aa14.6□□□□□ -0.07
UBE3B-210ENST00000539599 LENG1Q96BZ8 264 aaPredicted RBP14.6□□□□□ -0.07
UBE3B-210ENST00000539599 DCPSQ96C86 337 aaKnown RBP14.6□□□□□ -0.07
UBE3B-210ENST00000539599 APOPT1Q96IL0 206 aa14.6□□□□□ -0.07
UBE3B-210ENST00000539599 NUDCD1Q96RS6 583 aa14.6□□□□□ -0.07
UBE3B-210ENST00000539599 SETD4Q9NVD3 440 aa14.6□□□□□ -0.07
UBE3B-210ENST00000539599 ZNF638Q14966 1978 aaKnown RBP14.6□□□□□ -0.07
UBE3B-210ENST00000539599 CITO14578 2027 aa14.6□□□□□ -0.07
UBE3B-210ENST00000539599 HMX2A2RU54 273 aa14.6□□□□□ -0.07
UBE3B-210ENST00000539599 MCF2P10911 925 aa14.6□□□□□ -0.07
UBE3B-210ENST00000539599 AMPD1P23109 780 aa14.6□□□□□ -0.07
UBE3B-210ENST00000539599 SDC4P31431 198 aa14.6□□□□□ -0.07
UBE3B-210ENST00000539599 PCK1P35558 622 aa14.6□□□□□ -0.07
UBE3B-210ENST00000539599 GTF2A2P52657 109 aa14.6□□□□□ -0.07
UBE3B-210ENST00000539599 ARFIP2P53365 341 aa14.6□□□□□ -0.07
UBE3B-210ENST00000539599 NBPF20Q3BBV1 942 aa14.6□□□□□ -0.07
UBE3B-210ENST00000539599 LGMNQ99538 433 aa14.6□□□□□ -0.07
UBE3B-210ENST00000539599 NMUR2Q9GZQ4 415 aa14.6□□□□□ -0.07
UBE3B-210ENST00000539599 LAMA3Q16787 3333 aa14.6□□□□□ -0.07
UBE3B-210ENST00000539599 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.59□□□□□ -0.07
UBE3B-210ENST00000539599 IQANK1A0A1B0GTG1 560 aa14.59□□□□□ -0.07
UBE3B-210ENST00000539599 COPEO14579 308 aa14.59□□□□□ -0.07
UBE3B-210ENST00000539599 ADCY6O43306 1168 aa14.59□□□□□ -0.07
UBE3B-210ENST00000539599 GAS2O43903 313 aaKnown RBP14.59□□□□□ -0.07
UBE3B-210ENST00000539599 TROVE2P10155 538 aaKnown RBP eCLIP14.59□□□□□ -0.07
UBE3B-210ENST00000539599 SLC18A1P54219 525 aa14.59□□□□□ -0.07
UBE3B-210ENST00000539599 PRKD1Q15139 912 aaPredicted RBP14.59□□□□□ -0.07
UBE3B-210ENST00000539599 KHDC1Q4VXA5 237 aaKnown RBP14.59□□□□□ -0.07
UBE3B-210ENST00000539599 TAPT1Q6NXT6 567 aa14.59□□□□□ -0.07
UBE3B-210ENST00000539599 AEBP2Q6ZN18 517 aaPredicted RBP14.59□□□□□ -0.07
UBE3B-210ENST00000539599 FAM131BQ86XD5 332 aa14.59□□□□□ -0.07
UBE3B-210ENST00000539599 NXF3Q9H4D5 531 aaKnown RBP14.59□□□□□ -0.07
UBE3B-210ENST00000539599 SLC5A4Q9NY91 659 aa14.59□□□□□ -0.07
UBE3B-210ENST00000539599 SLC15A5A6NIM6 579 aa14.59□□□□□ -0.07
UBE3B-210ENST00000539599 DLDP09622 509 aaKnown RBP14.59□□□□□ -0.07
UBE3B-210ENST00000539599 GOT1P17174 413 aa14.59□□□□□ -0.07
UBE3B-210ENST00000539599 OSBPP22059 807 aa14.59□□□□□ -0.07
UBE3B-210ENST00000539599 SKIV2L2P42285 1042 aaKnown RBP14.59□□□□□ -0.07
UBE3B-210ENST00000539599 MARCH8Q5T0T0 291 aa14.59□□□□□ -0.07
UBE3B-210ENST00000539599 MTHFD1LQ6UB35 978 aa14.59□□□□□ -0.07
UBE3B-210ENST00000539599 DTX3LQ8TDB6 740 aa14.59□□□□□ -0.07
UBE3B-210ENST00000539599 TRIM55Q9BYV6 548 aa14.59□□□□□ -0.07
UBE3B-210ENST00000539599 GEMIN8Q9NWZ8 242 aaKnown RBP14.59□□□□□ -0.07
UBE3B-210ENST00000539599 HAUS5O94927 633 aa14.58□□□□□ -0.07
UBE3B-210ENST00000539599 ABL2P42684 1182 aa14.58□□□□□ -0.07
UBE3B-210ENST00000539599 RBP5P82980 135 aa14.58□□□□□ -0.07
UBE3B-210ENST00000539599 INCA1Q0VD86 236 aa14.58□□□□□ -0.07
UBE3B-210ENST00000539599 BST1Q10588 318 aa14.58□□□□□ -0.07
UBE3B-210ENST00000539599 KCNT2Q6UVM3 1135 aa14.58□□□□□ -0.07
UBE3B-210ENST00000539599 APBB1IPQ7Z5R6 666 aaPredicted RBP14.58□□□□□ -0.07
UBE3B-210ENST00000539599 ARID3BQ8IVW6 561 aaPredicted RBP14.58□□□□□ -0.07
UBE3B-210ENST00000539599 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.58□□□□□ -0.07
UBE3B-210ENST00000539599 RAB3IPQ96QF0 476 aaPredicted RBP14.58□□□□□ -0.07
UBE3B-210ENST00000539599 OSMRQ99650 979 aa14.58□□□□□ -0.07
UBE3B-210ENST00000539599 C16orf70Q9BSU1 422 aa14.58□□□□□ -0.07
UBE3B-210ENST00000539599 NRDE2Q9H7Z3 1164 aa14.58□□□□□ -0.07
UBE3B-210ENST00000539599 LTBP3Q9NS15 1303 aa14.58□□□□□ -0.08
UBE3B-210ENST00000539599 SPTLC1O15269 473 aa14.58□□□□□ -0.08
UBE3B-210ENST00000539599 TM9SF1O15321 606 aa14.58□□□□□ -0.08
UBE3B-210ENST00000539599 LYPLA1O75608 230 aaPredicted RBP14.58□□□□□ -0.08
UBE3B-210ENST00000539599 RFPL1O75677 317 aa14.58□□□□□ -0.08
UBE3B-210ENST00000539599 DHRS4L1P0CG22 281 aa14.58□□□□□ -0.08
UBE3B-210ENST00000539599 VAV1P15498 845 aa14.58□□□□□ -0.08
UBE3B-210ENST00000539599 PAX7P23759 505 aa14.58□□□□□ -0.08
UBE3B-210ENST00000539599 STIP1P31948 543 aaKnown RBP14.58□□□□□ -0.08
UBE3B-210ENST00000539599 ABCG1P45844 678 aa14.58□□□□□ -0.08
UBE3B-210ENST00000539599 SLC6A3Q01959 620 aa14.58□□□□□ -0.08
UBE3B-210ENST00000539599 CHI3L2Q15782 390 aa14.58□□□□□ -0.08
UBE3B-210ENST00000539599 SLC45A4Q5BKX6 768 aa14.58□□□□□ -0.08
UBE3B-210ENST00000539599 CASC4Q6P4E1 433 aa14.58□□□□□ -0.08
UBE3B-210ENST00000539599 SLC26A11Q86WA9 606 aa14.58□□□□□ -0.08
UBE3B-210ENST00000539599 ERO1BQ86YB8 467 aa14.58□□□□□ -0.08
UBE3B-210ENST00000539599 WDR60Q8WVS4 1066 aa14.58□□□□□ -0.08
UBE3B-210ENST00000539599 CLPTM1LQ96KA5 538 aa14.58□□□□□ -0.08
UBE3B-210ENST00000539599 KCTD15Q96SI1 283 aaPredicted RBP14.58□□□□□ -0.08
UBE3B-210ENST00000539599 ACSS2Q9NR19 701 aa14.58□□□□□ -0.08
UBE3B-210ENST00000539599 A8MXQ7 604 aa14.57□□□□□ -0.08
UBE3B-210ENST00000539599 CLDN5O00501 218 aa14.57□□□□□ -0.08
UBE3B-210ENST00000539599 TPBGLP0DKB5 382 aa14.57□□□□□ -0.08
UBE3B-210ENST00000539599 IREB2P48200 963 aaKnown RBP14.57□□□□□ -0.08
UBE3B-210ENST00000539599 PGGT1BP53609 377 aa14.57□□□□□ -0.08
UBE3B-210ENST00000539599 SESN2P58004 480 aaPredicted RBP14.57□□□□□ -0.08
UBE3B-210ENST00000539599 TFDP2Q14188 446 aa14.57□□□□□ -0.08
UBE3B-210ENST00000539599 RCN2Q14257 317 aa14.57□□□□□ -0.08
UBE3B-210ENST00000539599 BZW1Q7L1Q6 419 aaKnown RBP14.57□□□□□ -0.08
UBE3B-210ENST00000539599 TREML1Q86YW5 311 aa14.57□□□□□ -0.08
UBE3B-210ENST00000539599 CDCA5Q96FF9 252 aa14.57□□□□□ -0.08
UBE3B-210ENST00000539599 ATXN7L3BQ96GX2 97 aa14.57□□□□□ -0.08
UBE3B-210ENST00000539599 RSRC1Q96IZ7 334 aaKnown RBP14.57□□□□□ -0.08
UBE3B-210ENST00000539599 IQCGQ9H095 443 aaKnown RBP14.57□□□□□ -0.08
UBE3B-210ENST00000539599 VPS11Q9H270 941 aa14.57□□□□□ -0.08
UBE3B-210ENST00000539599 RNF39Q9H2S5 420 aa14.57□□□□□ -0.08
UBE3B-210ENST00000539599 ASB7Q9H672 318 aa14.57□□□□□ -0.08
UBE3B-210ENST00000539599 ZNF408Q9H9D4 720 aa14.57□□□□□ -0.08
UBE3B-210ENST00000539599 RNPEPL1Q9HAU8 725 aa14.57□□□□□ -0.08
UBE3B-210ENST00000539599 MTMR10Q9NXD2 777 aa14.57□□□□□ -0.08
UBE3B-210ENST00000539599 SEPT10Q9P0V9 454 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms