RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 PRG3Q9Y2Y8 225 aaPredicted RBP6.67□□□□□ -1.34
LSAMP-207ENST00000539563 MGAT4DA6NG13 374 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 PIK3CDO00329 1044 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 DGKIO75912 1065 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 BMP10O95393 424 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 ITGALP20701 1170 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 TARSP26639 723 aaKnown RBP6.67□□□□□ -1.34
LSAMP-207ENST00000539563 RXRGP48443 463 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 MAD2L1Q13257 205 aaPredicted RBP6.67□□□□□ -1.34
LSAMP-207ENST00000539563 OTOAQ7RTW8 1153 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 TDRD5Q8NAT2 981 aaKnown RBP6.67□□□□□ -1.34
LSAMP-207ENST00000539563 RSPH1Q8WYR4 309 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 ACSF2Q96CM8 615 aaPredicted RBP6.67□□□□□ -1.34
LSAMP-207ENST00000539563 DDX43Q9NXZ2 648 aaKnown RBP6.67□□□□□ -1.34
LSAMP-207ENST00000539563 NCKIPSDQ9NZQ3 722 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 ANKRD6Q9Y2G4 727 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 ARHGAP23Q9P227 1491 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 A0A087WZ62 844 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 TCRBV5S4A2TA0A5A2 114 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 TCF3P15923 654 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 NPY2RP49146 381 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.67□□□□□ -1.34
LSAMP-207ENST00000539563 FBXW10Q5XX13 1052 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 RBM43Q6ZSC3 357 aaKnown RBP6.67□□□□□ -1.34
LSAMP-207ENST00000539563 SCUBE1Q8IWY4 988 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 SYTL5Q8TDW5 730 aaPredicted RBP6.67□□□□□ -1.34
LSAMP-207ENST00000539563 MTFR1LQ9H019 292 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 PALMDQ9NP74 551 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 FAM205AQ6ZU69 1335 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 SPATA31D1Q6ZQQ2 1576 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 MAGEA13PA6NCF6 341 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 MANSC4A6NHS7 340 aaPredicted RBP6.67□□□□□ -1.34
LSAMP-207ENST00000539563 ACADMP11310 421 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 GPC1P35052 558 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 SEZ6Q53EL9 994 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 ZPBP2Q6X784 338 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 SIKE1Q9BRV8 207 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 AHSPQ9NZD4 102 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 UXTQ9UBK9 157 aaPredicted RBP6.67□□□□□ -1.34
LSAMP-207ENST00000539563 AP4S1Q9Y587 144 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 H3BRB1 525 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 FKBP6O75344 327 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 RASSF9O75901 435 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 TKTP29401 623 aaKnown RBP6.67□□□□□ -1.34
LSAMP-207ENST00000539563 ALDH6A1Q02252 535 aaKnown RBP6.67□□□□□ -1.34
LSAMP-207ENST00000539563 FUT11Q495W5 492 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 TTC33Q6PID6 262 aaPredicted RBP6.67□□□□□ -1.34
LSAMP-207ENST00000539563 LAYNQ6UX15 382 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 SLC26A11Q86WA9 606 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 PPP1R10Q96QC0 940 aaKnown RBP6.67□□□□□ -1.34
LSAMP-207ENST00000539563 TUT1Q9H6E5 874 aaKnown RBP6.67□□□□□ -1.34
LSAMP-207ENST00000539563 ARMC7Q9H6L4 198 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 SLC40A1Q9NP59 571 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 SLC12A8A0AV02 714 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 UBE2Q2LH0YL09 131 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 UBXN8O00124 270 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 TRIM66O15016 1216 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 SERPINI2O75830 405 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 EIF2S1P05198 315 aaKnown RBP6.67□□□□□ -1.34
LSAMP-207ENST00000539563 PSMC3P17980 439 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 CYP2A7P20853 494 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 YY1P25490 414 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 DNAJB2P25686 324 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 CENPAP49450 140 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 MYL6P60660 151 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 MKRN4PQ13434 485 aaPredicted RBP6.67□□□□□ -1.34
LSAMP-207ENST00000539563 NAB1Q13506 487 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 FAXCQ5TGI0 409 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 TAF2Q6P1X5 1199 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 ABRAQ8N0Z2 381 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 JADE3Q92613 823 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 SMARCD1Q96GM5 515 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 ASB7Q9H672 318 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 STARD7Q9NQZ5 370 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 THG1LQ9NWX6 298 aaKnown RBP6.67□□□□□ -1.34
LSAMP-207ENST00000539563 COMMD8Q9NX08 183 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 POLG2Q9UHN1 485 aa6.67□□□□□ -1.34
LSAMP-207ENST00000539563 NQO1P15559 274 aaKnown RBP6.66□□□□□ -1.34
LSAMP-207ENST00000539563 RRM1P23921 792 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 SERPINB5P36952 375 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 RAP1GAPP47736 663 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 IRX1P78414 480 aaPredicted RBP6.66□□□□□ -1.34
LSAMP-207ENST00000539563 CDC16Q13042 620 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 EZH2Q15910 746 aaKnown RBP6.66□□□□□ -1.34
LSAMP-207ENST00000539563 GRIK4Q16099 956 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 OTOP1Q7RTM1 612 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 CDC42EP4Q9H3Q1 356 aaKnown RBP6.66□□□□□ -1.34
LSAMP-207ENST00000539563 SNTG2Q9NY99 539 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 CAB39Q9Y376 341 aaPredicted RBP6.66□□□□□ -1.34
LSAMP-207ENST00000539563 PCDHB5Q9Y5E4 795 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 IFRD1O00458 451 aaPredicted RBP6.66□□□□□ -1.34
LSAMP-207ENST00000539563 CKMP06732 381 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 SPIRE2Q8WWL2 714 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 KLF6Q99612 283 aaPredicted RBP6.66□□□□□ -1.34
LSAMP-207ENST00000539563 TMEM121Q9BTD3 319 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 SLC24A3Q9HC58 644 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 GBA2Q9HCG7 927 aaPredicted RBP6.66□□□□□ -1.34
LSAMP-207ENST00000539563 STK39Q9UEW8 545 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 TMEM114B3SHH9 223 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 SYNCRIPO60506 623 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms