RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 SERPINB12Q96P63 405 aa15.41■□□□□ 0.06
ATL3-203ENST00000538786 ULBP1Q9BZM6 244 aa15.41■□□□□ 0.06
ATL3-203ENST00000538786 PHACTR1Q9C0D0 580 aa15.41■□□□□ 0.06
ATL3-203ENST00000538786 TMEM30AQ9NV96 361 aa15.41■□□□□ 0.06
ATL3-203ENST00000538786 FZD10Q9ULW2 581 aa15.41■□□□□ 0.06
ATL3-203ENST00000538786 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.4■□□□□ 0.06
ATL3-203ENST00000538786 CFAP69A5D8W1 941 aa15.4■□□□□ 0.06
ATL3-203ENST00000538786 HHLA1C9JL84 531 aa15.4■□□□□ 0.06
ATL3-203ENST00000538786 NRP1O14786 923 aa15.4■□□□□ 0.06
ATL3-203ENST00000538786 ABHD2P08910 425 aa15.4■□□□□ 0.06
ATL3-203ENST00000538786 TYMPP19971 482 aa15.4■□□□□ 0.06
ATL3-203ENST00000538786 SLCO1A2P46721 670 aa15.4■□□□□ 0.06
ATL3-203ENST00000538786 CACNA2D1P54289 1103 aa15.4■□□□□ 0.06
ATL3-203ENST00000538786 GUCY1A3Q02108 690 aa15.4■□□□□ 0.06
ATL3-203ENST00000538786 TNFAIP8L3Q5GJ75 292 aa15.4■□□□□ 0.06
ATL3-203ENST00000538786 TTC19Q6DKK2 380 aaPredicted RBP15.4■□□□□ 0.06
ATL3-203ENST00000538786 OVOS1Q6IE37 1185 aa15.4■□□□□ 0.06
ATL3-203ENST00000538786 CENPUQ71F23 418 aa15.4■□□□□ 0.06
ATL3-203ENST00000538786 FAM131BQ86XD5 332 aa15.4■□□□□ 0.06
ATL3-203ENST00000538786 HASPINQ8TF76 798 aa15.4■□□□□ 0.06
ATL3-203ENST00000538786 LINC01599Q8WXQ3 324 aa15.4■□□□□ 0.06
ATL3-203ENST00000538786 RTP4Q96DX8 246 aa15.4■□□□□ 0.06
ATL3-203ENST00000538786 C9orf72Q96LT7 481 aa15.4■□□□□ 0.06
ATL3-203ENST00000538786 TTC25Q96NG3 672 aa15.4■□□□□ 0.06
ATL3-203ENST00000538786 CSPG4P5Q96PW8 444 aa15.4■□□□□ 0.06
ATL3-203ENST00000538786 KCTD15Q96SI1 283 aaPredicted RBP15.4■□□□□ 0.06
ATL3-203ENST00000538786 PKMYT1Q99640 499 aa15.4■□□□□ 0.06
ATL3-203ENST00000538786 USP29Q9HBJ7 922 aa15.4■□□□□ 0.06
ATL3-203ENST00000538786 SAYSD1Q9NPB0 183 aa15.4■□□□□ 0.06
ATL3-203ENST00000538786 RCOR3Q9P2K3 495 aaPredicted RBP15.4■□□□□ 0.06
ATL3-203ENST00000538786 SLC12A6Q9UHW9 1150 aa15.4■□□□□ 0.06
ATL3-203ENST00000538786 HEY1Q9Y5J3 304 aa15.4■□□□□ 0.06
ATL3-203ENST00000538786 BCLAF3A2AJT9 711 aaKnown RBP15.39■□□□□ 0.05
ATL3-203ENST00000538786 KBTBD13C9JR72 458 aa15.39■□□□□ 0.05
ATL3-203ENST00000538786 NR2C2P49116 596 aa15.39■□□□□ 0.05
ATL3-203ENST00000538786 MAPRE1Q15691 268 aaKnown RBP15.39■□□□□ 0.05
ATL3-203ENST00000538786 ZSCAN26Q16670 478 aa15.39■□□□□ 0.05
ATL3-203ENST00000538786 LONRF1Q17RB8 773 aa15.39■□□□□ 0.05
ATL3-203ENST00000538786 SYPL2Q5VXT5 272 aa15.39■□□□□ 0.05
ATL3-203ENST00000538786 HFE2Q6ZVN8 426 aa15.39■□□□□ 0.05
ATL3-203ENST00000538786 GPRIN1Q7Z2K8 1008 aa15.39■□□□□ 0.05
ATL3-203ENST00000538786 THEM5Q8N1Q8 247 aa15.39■□□□□ 0.05
ATL3-203ENST00000538786 NAT8LQ8N9F0 302 aa15.39■□□□□ 0.05
ATL3-203ENST00000538786 ZNF296Q8WUU4 475 aaPredicted RBP15.39■□□□□ 0.05
ATL3-203ENST00000538786 FTHL17Q9BXU8 183 aa15.39■□□□□ 0.05
ATL3-203ENST00000538786 SEZ6LQ9BYH1 1024 aa15.39■□□□□ 0.05
ATL3-203ENST00000538786 CNOT10Q9H9A5 744 aaKnown RBP15.39■□□□□ 0.05
ATL3-203ENST00000538786 PRDM16Q9HAZ2 1276 aa15.39■□□□□ 0.05
ATL3-203ENST00000538786 YJEFN3A6XGL0 299 aa15.39■□□□□ 0.05
ATL3-203ENST00000538786 E7ENQ6 273 aa15.39■□□□□ 0.05
ATL3-203ENST00000538786 M0QYT0 321 aa15.39■□□□□ 0.05
ATL3-203ENST00000538786 ALOX15BO15296 676 aa15.39■□□□□ 0.05
ATL3-203ENST00000538786 ZBED1O96006 694 aa15.39■□□□□ 0.05
ATL3-203ENST00000538786 ITGB1P05556 798 aa15.39■□□□□ 0.05
ATL3-203ENST00000538786 FYNP06241 537 aa15.39■□□□□ 0.05
ATL3-203ENST00000538786 PITX1P78337 314 aaPredicted RBP15.39■□□□□ 0.05
ATL3-203ENST00000538786 DSC1Q08554 894 aa15.39■□□□□ 0.05
ATL3-203ENST00000538786 STAT4Q14765 748 aa15.39■□□□□ 0.05
ATL3-203ENST00000538786 HIF1AQ16665 826 aa15.39■□□□□ 0.05
ATL3-203ENST00000538786 NOMO2Q5JPE7 1267 aa15.39■□□□□ 0.05
ATL3-203ENST00000538786 CLLU1OSQ5K130 101 aa15.39■□□□□ 0.05
ATL3-203ENST00000538786 LRRC8DQ7L1W4 858 aa15.39■□□□□ 0.05
ATL3-203ENST00000538786 URGCPQ8TCY9 931 aa15.39■□□□□ 0.05
ATL3-203ENST00000538786 SLC9A7Q96T83 725 aa15.39■□□□□ 0.05
ATL3-203ENST00000538786 CCDC77Q9BR77 488 aa15.39■□□□□ 0.05
ATL3-203ENST00000538786 CWC15Q9P013 229 aaKnown RBP15.39■□□□□ 0.05
ATL3-203ENST00000538786 NAALADL1Q9UQQ1 740 aa15.39■□□□□ 0.05
ATL3-203ENST00000538786 USP3Q9Y6I4 520 aa15.39■□□□□ 0.05
ATL3-203ENST00000538786 CAPN9O14815 690 aa15.38■□□□□ 0.05
ATL3-203ENST00000538786 IVLP07476 585 aa15.38■□□□□ 0.05
ATL3-203ENST00000538786 SELPP16109 830 aa15.38■□□□□ 0.05
ATL3-203ENST00000538786 LSP1P33241 339 aa15.38■□□□□ 0.05
ATL3-203ENST00000538786 ARL4AP40617 200 aa15.38■□□□□ 0.05
ATL3-203ENST00000538786 RABGGTBP53611 331 aa15.38■□□□□ 0.05
ATL3-203ENST00000538786 IFI35P80217 286 aaPredicted RBP15.38■□□□□ 0.05
ATL3-203ENST00000538786 DEUP1Q05D60 604 aa15.38■□□□□ 0.05
ATL3-203ENST00000538786 XRCC4Q13426 336 aa15.38■□□□□ 0.05
ATL3-203ENST00000538786 ANKRD22Q5VYY1 191 aa15.38■□□□□ 0.05
ATL3-203ENST00000538786 CDKL3Q8IVW4 592 aaPredicted RBP15.38■□□□□ 0.05
ATL3-203ENST00000538786 OR10T2Q8NGX3 314 aa15.38■□□□□ 0.05
ATL3-203ENST00000538786 RHOBTB2Q9BYZ6 727 aa15.38■□□□□ 0.05
ATL3-203ENST00000538786 MAGEB5Q9BZ81 275 aa15.38■□□□□ 0.05
ATL3-203ENST00000538786 DMAP1Q9NPF5 467 aaPredicted RBP15.38■□□□□ 0.05
ATL3-203ENST00000538786 PAK5Q9P286 719 aa15.38■□□□□ 0.05
ATL3-203ENST00000538786 KANSL3Q9P2N6 904 aa15.38■□□□□ 0.05
ATL3-203ENST00000538786 PCDHB8Q9UN66 801 aa15.38■□□□□ 0.05
ATL3-203ENST00000538786 A0A087WUV0 522 aaPredicted RBP15.37■□□□□ 0.05
ATL3-203ENST00000538786 F8W810 466 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 KCNN4O15554 427 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 DDHD2O94830 711 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 LTFP02788 710 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 USP17L7P0C7H9 530 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 COL6A1P12109 1028 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 CDK7P50613 346 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 AIF1P55008 147 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 ARL4CP56559 192 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 TSPY1Q01534 308 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 PDIA2Q13087 525 aaKnown RBP15.37■□□□□ 0.05
ATL3-203ENST00000538786 NME3Q13232 169 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 B4GALNT4Q76KP1 1039 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms