RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 SOAT2O75908 522 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 FARP2O94887 1054 aaPredicted RBP5.53□□□□□ -1.52
LRP6-203ENST00000538239 GJB6O95452 261 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 PYGBP11216 843 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 ALOX15P16050 662 aaPredicted RBP5.53□□□□□ -1.52
LRP6-203ENST00000538239 SLC8A1P32418 973 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 RENBPP51606 427 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 SLC13A5Q86YT5 568 aaPredicted RBP5.53□□□□□ -1.52
LRP6-203ENST00000538239 MAP4K3Q8IVH8 894 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 SKA1Q96BD8 255 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 HES6Q96HZ4 224 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 ATP6V1G3Q96LB4 118 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 LRRC37BQ96QE4 947 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 KCNF1Q9H3M0 494 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 IL1RL2Q9HB29 575 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 OSGEPQ9NPF4 335 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 VPS9D1Q9Y2B5 631 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 CICQ96RK0 1608 aaPredicted RBP5.53□□□□□ -1.52
LRP6-203ENST00000538239 TBL1XO60907 577 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 STAU1O95793 577 aaKnown RBP5.53□□□□□ -1.52
LRP6-203ENST00000538239 SELPP16109 830 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 AMPD1P23109 780 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 ATP5C1P36542 298 aaKnown RBP5.53□□□□□ -1.52
LRP6-203ENST00000538239 GEMIN4P57678 1058 aaKnown RBP5.53□□□□□ -1.52
LRP6-203ENST00000538239 CAPSQ13938 189 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 MTFR1Q15390 333 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 MAPRE2Q15555 327 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 NFIL3Q16649 462 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 MARC1Q5VT66 337 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 RAP1GAP2Q684P5 730 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 ZNF571Q7Z3V5 609 aaPredicted RBP5.53□□□□□ -1.52
LRP6-203ENST00000538239 NT5DC4Q86YG4 428 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 ZNF606Q8WXB4 792 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 ACO2Q99798 780 aaKnown RBP5.53□□□□□ -1.52
LRP6-203ENST00000538239 PIH1D1Q9NWS0 290 aaKnown RBP5.53□□□□□ -1.52
LRP6-203ENST00000538239 GGT7Q9UJ14 662 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 AURKCQ9UQB9 309 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 PDZK1P1A8MUH7 402 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 TCP11X1B4DZS4 312 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 NDUFB5O43674 189 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 TPH1P17752 444 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 HDCP19113 662 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 YWHAZP63104 245 aaKnown RBP5.53□□□□□ -1.52
LRP6-203ENST00000538239 PABPC1LQ4VXU2 614 aaKnown RBP5.53□□□□□ -1.52
LRP6-203ENST00000538239 RETSATQ6NUM9 610 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 TMCO5AQ8N6Q1 288 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 FAM161BQ96MY7 647 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 UNKQ9C0B0 810 aaKnown RBP5.53□□□□□ -1.52
LRP6-203ENST00000538239 UBE2OQ9C0C9 1292 aaKnown RBP5.53□□□□□ -1.52
LRP6-203ENST00000538239 PSD3Q9NYI0 1048 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 MARCH2Q9P0N8 246 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 DNMT3LQ9UJW3 386 aa5.53□□□□□ -1.52
LRP6-203ENST00000538239 H0Y3Z8 333 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 GLP2RO95838 553 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 ACRP10323 421 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 CRHR2Q13324 411 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 KYNUQ16719 465 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 E4F1Q66K89 784 aaPredicted RBP5.52□□□□□ -1.53
LRP6-203ENST00000538239 TATDN1Q6P1N9 297 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 DSG4Q86SJ6 1040 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 SERAC1Q96JX3 654 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 MRPL40Q9NQ50 206 aaKnown RBP5.52□□□□□ -1.53
LRP6-203ENST00000538239 ABCC13Q9NSE7 274 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 BTBD7Q9P203 1132 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 NDOR1Q9UHB4 597 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 LNPEPQ9UIQ6 1025 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 E5RJQ4 531 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 RBAK-RBAKDNI3L0D1 243 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 CLDN5O00501 218 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 PLA2G6O60733 806 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 ATP5BP06576 529 aaKnown RBP5.52□□□□□ -1.53
LRP6-203ENST00000538239 SNRPAP09012 282 aaKnown RBP5.52□□□□□ -1.53
LRP6-203ENST00000538239 RARGP13631 454 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 CTSEP14091 401 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 GLRBP48167 497 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 NCALDP61601 193 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 CDC16Q13042 620 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 POU6F1Q14863 301 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 DDR2Q16832 855 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 FBXL19Q6PCT2 694 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 ILDR2Q71H61 639 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 USP38Q8NB14 1042 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 ARNTL2Q8WYA1 636 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 ECT2Q9H8V3 914 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 TBC1D13Q9NVG8 400 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 TMEM161AQ9NX61 479 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 ARHGAP26Q9UNA1 814 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 SPACA6W5XKT8 324 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 MYOM1P52179 1685 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 SALL3Q9BXA9 1300 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 A0A087X0B3 334 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 PIK3CDO00329 1044 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 FOXP2O15409 715 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 GUCA1CO95843 209 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 YBX3P16989 372 aaKnown RBP eCLIP5.52□□□□□ -1.53
LRP6-203ENST00000538239 ABCE1P61221 599 aaKnown RBP5.52□□□□□ -1.53
LRP6-203ENST00000538239 PLIN5Q00G26 463 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 KDSRQ06136 332 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 BCL2L1Q07817 233 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 FAM83EQ2M2I3 478 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms