RNA–Protein interactions for RNA: ENST00000537004.5

CLIP1-208, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-208ENST00000537004 SEPT5Q99719 369 aaPredicted RBP12.52□□□□□ -0.41
CLIP1-208ENST00000537004 LPIN3Q9BQK8 851 aa12.52□□□□□ -0.41
CLIP1-208ENST00000537004 OXCT2Q9BYC2 517 aaPredicted RBP12.52□□□□□ -0.41
CLIP1-208ENST00000537004 ACBD3Q9H3P7 528 aa12.52□□□□□ -0.41
CLIP1-208ENST00000537004 ABI2Q9NYB9 513 aaPredicted RBP12.52□□□□□ -0.41
CLIP1-208ENST00000537004 HPCAL4Q9UM19 191 aa12.52□□□□□ -0.41
CLIP1-208ENST00000537004 MYO1FO00160 1098 aa12.51□□□□□ -0.41
CLIP1-208ENST00000537004 ATP2C2O75185 946 aa12.51□□□□□ -0.41
CLIP1-208ENST00000537004 POU2F2P09086 479 aa12.51□□□□□ -0.41
CLIP1-208ENST00000537004 PYGMP11217 842 aa12.51□□□□□ -0.41
CLIP1-208ENST00000537004 MYL4P12829 197 aa12.51□□□□□ -0.41
CLIP1-208ENST00000537004 MMP8P22894 467 aa12.51□□□□□ -0.41
CLIP1-208ENST00000537004 OAS2P29728 719 aaKnown RBP12.51□□□□□ -0.41
CLIP1-208ENST00000537004 ATICP31939 592 aa12.51□□□□□ -0.41
CLIP1-208ENST00000537004 MYO1EQ12965 1108 aa12.51□□□□□ -0.41
CLIP1-208ENST00000537004 MAMLD1Q13495 774 aa12.51□□□□□ -0.41
CLIP1-208ENST00000537004 HTR4Q13639 388 aa12.51□□□□□ -0.41
CLIP1-208ENST00000537004 MGAT5BQ3V5L5 792 aa12.51□□□□□ -0.41
CLIP1-208ENST00000537004 PRSS36Q5K4E3 855 aa12.51□□□□□ -0.41
CLIP1-208ENST00000537004 SEL1L2Q5TEA6 688 aa12.51□□□□□ -0.41
CLIP1-208ENST00000537004 PLEKHA7Q6IQ23 1121 aa12.51□□□□□ -0.41
CLIP1-208ENST00000537004 SND1Q7KZF4 910 aaKnown RBP eCLIP12.51□□□□□ -0.41
CLIP1-208ENST00000537004 CCDC26Q8TAB7 109 aa12.51□□□□□ -0.41
CLIP1-208ENST00000537004 ZSWIM3Q96MP5 696 aa12.51□□□□□ -0.41
CLIP1-208ENST00000537004 MRPL47Q9HD33 250 aaKnown RBP12.51□□□□□ -0.41
CLIP1-208ENST00000537004 AMACRQ9UHK6 382 aa12.51□□□□□ -0.41
CLIP1-208ENST00000537004 NFU1Q9UMS0 254 aa12.51□□□□□ -0.41
CLIP1-208ENST00000537004 SCINQ9Y6U3 715 aa12.51□□□□□ -0.41
CLIP1-208ENST00000537004 FRYLO94915 3013 aa12.51□□□□□ -0.41
CLIP1-208ENST00000537004 ANHXE9PGG2 379 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 H3BQF6 201 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 MOSPD3O75425 235 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 PDGFRBP09619 1106 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 ATF6P18850 670 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 SLC1A1P43005 524 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 ALDH1A3P47895 512 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 GPR15P49685 360 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 CDH8P55286 799 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 RWDD2BP57060 319 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 PSMC1P62191 440 aaKnown RBP12.5□□□□□ -0.41
CLIP1-208ENST00000537004 TRADDQ15628 312 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 PPP2R5EQ16537 467 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 PDZD4Q76G19 769 aaPredicted RBP12.5□□□□□ -0.41
CLIP1-208ENST00000537004 MAATS1Q7Z4T9 603 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 UBALD2Q8IYN6 164 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 TMEM35BQ8NCS4 154 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 C1orf131Q8NDD1 294 aaKnown RBP12.5□□□□□ -0.41
CLIP1-208ENST00000537004 GIPC2Q8TF65 315 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 KXD1Q9BQD3 176 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 ZNF518BQ9C0D4 1074 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 SDCBP2Q9H190 292 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 SMYD3Q9H7B4 428 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 VRTNQ9H8Y1 702 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 IGSF9Q9P2J2 1179 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 PCDHGC3Q9UN70 934 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 NME7Q9Y5B8 376 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 MYBPHLA2RUH7 354 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 GABRDO14764 452 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 CALB1P05937 261 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 P4HA1P13674 534 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 CD19P15391 556 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 STXBP5Q5T5C0 1151 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 IER5LQ5T953 404 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 SDHAF4Q5VUM1 108 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 LIMS2Q7Z4I7 341 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 ELMOD1Q8N336 334 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 TOP6BLQ8N6T0 577 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 CAVIN3Q969G5 261 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 ZBTB9Q96C00 473 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 MRPL45Q9BRJ2 306 aaKnown RBP12.5□□□□□ -0.41
CLIP1-208ENST00000537004 LRRC3Q9BY71 257 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 ZNF334Q9HCZ1 680 aaPredicted RBP12.5□□□□□ -0.41
CLIP1-208ENST00000537004 ASAH2Q9NR71 780 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 PARVAQ9NVD7 372 aa12.5□□□□□ -0.41
CLIP1-208ENST00000537004 TSC2P49815 1807 aa12.49□□□□□ -0.41
CLIP1-208ENST00000537004 A0A1W2PRU2 124 aa12.49□□□□□ -0.41
CLIP1-208ENST00000537004 BHMG1C9JSJ3 638 aaPredicted RBP12.49□□□□□ -0.41
CLIP1-208ENST00000537004 TTI1O43156 1089 aa12.49□□□□□ -0.41
CLIP1-208ENST00000537004 PROSCO94903 275 aa12.49□□□□□ -0.41
CLIP1-208ENST00000537004 PAEPP09466 180 aa12.49□□□□□ -0.41
CLIP1-208ENST00000537004 CYP2F1P24903 491 aa12.49□□□□□ -0.41
CLIP1-208ENST00000537004 CDH5P33151 784 aaPredicted RBP12.49□□□□□ -0.41
CLIP1-208ENST00000537004 RAD23BP54727 409 aa12.49□□□□□ -0.41
CLIP1-208ENST00000537004 EPHB3P54753 998 aa12.49□□□□□ -0.41
CLIP1-208ENST00000537004 TSPY1Q01534 308 aa12.49□□□□□ -0.41
CLIP1-208ENST00000537004 CYP4A22Q5TCH4 519 aa12.49□□□□□ -0.41
CLIP1-208ENST00000537004 DNAJB7Q7Z6W7 309 aaPredicted RBP12.49□□□□□ -0.41
CLIP1-208ENST00000537004 TMC8Q8IU68 726 aa12.49□□□□□ -0.41
CLIP1-208ENST00000537004 TMEM86AQ8N2M4 240 aa12.49□□□□□ -0.41
CLIP1-208ENST00000537004 PKMYT1Q99640 499 aa12.49□□□□□ -0.41
CLIP1-208ENST00000537004 ACBD6Q9BR61 282 aa12.49□□□□□ -0.41
CLIP1-208ENST00000537004 CYP3A43Q9HB55 503 aa12.49□□□□□ -0.41
CLIP1-208ENST00000537004 MAFFQ9ULX9 164 aa12.49□□□□□ -0.41
CLIP1-208ENST00000537004 DUSP12Q9UNI6 340 aa12.49□□□□□ -0.41
CLIP1-208ENST00000537004 CEP83Q9Y592 693 aa12.49□□□□□ -0.41
CLIP1-208ENST00000537004 MED7O43513 233 aa12.49□□□□□ -0.41
CLIP1-208ENST00000537004 CILPO75339 1184 aa12.49□□□□□ -0.41
CLIP1-208ENST00000537004 VCPP55072 806 aaKnown RBP12.49□□□□□ -0.41
CLIP1-208ENST00000537004 NNTQ13423 1086 aa12.49□□□□□ -0.41
CLIP1-208ENST00000537004 CUL1Q13616 776 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms