RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 RPLP0P6Q8NHW5 317 aa18.76■□□□□ 0.59
TNFRSF1A-209ENST00000536717 UBA3Q8TBC4 463 aa18.76■□□□□ 0.59
TNFRSF1A-209ENST00000536717 NDST4Q9H3R1 872 aa18.76■□□□□ 0.59
TNFRSF1A-209ENST00000536717 POLR3BQ9NW08 1133 aaPredicted RBP18.76■□□□□ 0.59
TNFRSF1A-209ENST00000536717 TAB2Q9NYJ8 693 aa18.76■□□□□ 0.59
TNFRSF1A-209ENST00000536717 HESX1Q9UBX0 185 aa18.76■□□□□ 0.59
TNFRSF1A-209ENST00000536717 LIMA1Q9UHB6 759 aaKnown RBP18.76■□□□□ 0.59
TNFRSF1A-209ENST00000536717 DNMT3LQ9UJW3 386 aa18.76■□□□□ 0.59
TNFRSF1A-209ENST00000536717 K7EQS6 105 aa18.75■□□□□ 0.59
TNFRSF1A-209ENST00000536717 ATG13O75143 517 aa18.75■□□□□ 0.59
TNFRSF1A-209ENST00000536717 CALCAP01258 141 aa18.75■□□□□ 0.59
TNFRSF1A-209ENST00000536717 RALAP11233 206 aa18.75■□□□□ 0.59
TNFRSF1A-209ENST00000536717 ATP1A3P13637 1013 aa18.75■□□□□ 0.59
TNFRSF1A-209ENST00000536717 HOXA6P31267 233 aa18.75■□□□□ 0.59
TNFRSF1A-209ENST00000536717 EIF2DP41214 584 aaKnown RBP18.75■□□□□ 0.59
TNFRSF1A-209ENST00000536717 FNTBP49356 437 aa18.75■□□□□ 0.59
TNFRSF1A-209ENST00000536717 ZNF132P52740 706 aa18.75■□□□□ 0.59
TNFRSF1A-209ENST00000536717 BHLHA9Q7RTU4 235 aa18.75■□□□□ 0.59
TNFRSF1A-209ENST00000536717 RBBP8NLQ8NC74 664 aaPredicted RBP18.75■□□□□ 0.59
TNFRSF1A-209ENST00000536717 NDRG1Q92597 394 aaKnown RBP18.75■□□□□ 0.59
TNFRSF1A-209ENST00000536717 ULBP1Q9BZM6 244 aa18.75■□□□□ 0.59
TNFRSF1A-209ENST00000536717 VPS16Q9H269 839 aa18.75■□□□□ 0.59
TNFRSF1A-209ENST00000536717 SPHK2Q9NRA0 654 aa18.75■□□□□ 0.59
TNFRSF1A-209ENST00000536717 ZBED1O96006 694 aa18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 SETSIPP0DME0 302 aa18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 BRD2P25440 801 aaKnown RBP18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 GAD2Q05329 585 aa18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 ADIGQ0VDE8 80 aa18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 MIIPQ5JXC2 388 aa18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 HEATR6Q6AI08 1181 aaKnown RBP18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 SFTPA1Q8IWL2 248 aa18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 CRACR2AQ9BSW2 395 aa18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 CNTN6Q9UQ52 1028 aa18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 CEP250Q9BV73 2442 aa18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 LRRC10BA6NIK2 292 aa18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 HOXC11O43248 304 aaPredicted RBP18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 STC2O76061 302 aa18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 COPB1P53618 953 aaKnown RBP18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 YWHAGP61981 247 aaKnown RBP eCLIP18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 GOLGA8FQ08AF8 430 aa18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 GOLGA8DPQ0D2H9 430 aa18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 CNGA2Q16280 664 aa18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 TRIM65Q6PJ69 517 aa18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 Q6ZNB5 142 aa18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 TADA2BQ86TJ2 420 aa18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 LONP2Q86WA8 852 aa18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 TMEM25Q86YD3 366 aa18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 MIB1Q86YT6 1006 aa18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 ETFBKMTQ8IXQ9 262 aa18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 ARHGAP18Q8N392 663 aa18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 PHTF2Q8N3S3 785 aa18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 SLC35F5Q8WV83 523 aa18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 KCTD13Q8WZ19 329 aa18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 CDK5RAP1Q96SZ6 601 aaKnown RBP18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 PNKPQ96T60 521 aa18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 LRRC4Q9HBW1 653 aa18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 LSM7Q9UK45 103 aaKnown RBP18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 SMG5Q9UPR3 1016 aaKnown RBP18.74■□□□□ 0.59
TNFRSF1A-209ENST00000536717 ABCA7Q8IZY2 2146 aa18.73■□□□□ 0.59
TNFRSF1A-209ENST00000536717 GTPBP10A4D1E9 387 aaKnown RBP18.73■□□□□ 0.59
TNFRSF1A-209ENST00000536717 HRO43593 1189 aa18.73■□□□□ 0.59
TNFRSF1A-209ENST00000536717 GABBR2O75899 941 aa18.73■□□□□ 0.59
TNFRSF1A-209ENST00000536717 SERPINC1P01008 464 aa18.73■□□□□ 0.59
TNFRSF1A-209ENST00000536717 CHRM1P11229 460 aaPredicted RBP18.73■□□□□ 0.59
TNFRSF1A-209ENST00000536717 SLC9A1P19634 815 aa18.73■□□□□ 0.59
TNFRSF1A-209ENST00000536717 EFEMP1Q12805 493 aa18.73■□□□□ 0.59
TNFRSF1A-209ENST00000536717 FILIP1LQ4L180 1135 aa18.73■□□□□ 0.59
TNFRSF1A-209ENST00000536717 PMF1Q6P1K2 205 aa18.73■□□□□ 0.59
TNFRSF1A-209ENST00000536717 SYT13Q7L8C5 426 aa18.73■□□□□ 0.59
TNFRSF1A-209ENST00000536717 DCLK2Q8N568 766 aa18.73■□□□□ 0.59
TNFRSF1A-209ENST00000536717 USP33Q8TEY7 942 aa18.73■□□□□ 0.59
TNFRSF1A-209ENST00000536717 RUBCNQ92622 972 aa18.73■□□□□ 0.59
TNFRSF1A-209ENST00000536717 UBE2TQ9NPD8 197 aaPredicted RBP18.73■□□□□ 0.59
TNFRSF1A-209ENST00000536717 RASAL2Q9UJF2 1139 aa18.73■□□□□ 0.59
TNFRSF1A-209ENST00000536717 SLC8A2Q9UPR5 921 aa18.73■□□□□ 0.59
TNFRSF1A-209ENST00000536717 A0A0A0MRY4 1105 aa18.72■□□□□ 0.59
TNFRSF1A-209ENST00000536717 M0QYV0 167 aa18.72■□□□□ 0.59
TNFRSF1A-209ENST00000536717 KAT7O95251 611 aa18.72■□□□□ 0.59
TNFRSF1A-209ENST00000536717 KLKB1P03952 638 aa18.72■□□□□ 0.59
TNFRSF1A-209ENST00000536717 PXNP49023 591 aaPredicted RBP18.72■□□□□ 0.59
TNFRSF1A-209ENST00000536717 SEC13P55735 322 aa18.72■□□□□ 0.59
TNFRSF1A-209ENST00000536717 APBA1Q02410 837 aa18.72■□□□□ 0.59
TNFRSF1A-209ENST00000536717 SRSF5Q13243 272 aaKnown RBP18.72■□□□□ 0.59
TNFRSF1A-209ENST00000536717 STILQ15468 1287 aa18.72■□□□□ 0.59
TNFRSF1A-209ENST00000536717 ANO4Q32M45 955 aa18.72■□□□□ 0.59
TNFRSF1A-209ENST00000536717 FKBP15Q5T1M5 1219 aa18.72■□□□□ 0.59
TNFRSF1A-209ENST00000536717 GJB7Q6PEY0 223 aa18.72■□□□□ 0.59
TNFRSF1A-209ENST00000536717 GBP6Q6ZN66 633 aa18.72■□□□□ 0.59
TNFRSF1A-209ENST00000536717 WDR5BQ86VZ2 330 aa18.72■□□□□ 0.59
TNFRSF1A-209ENST00000536717 NAT16Q8N8M0 369 aa18.72■□□□□ 0.59
TNFRSF1A-209ENST00000536717 SECISBP2LQ93073 1101 aaKnown RBP18.72■□□□□ 0.59
TNFRSF1A-209ENST00000536717 YJEFN3A6XGL0 299 aa18.71■□□□□ 0.59
TNFRSF1A-209ENST00000536717 E7ENQ6 273 aa18.71■□□□□ 0.59
TNFRSF1A-209ENST00000536717 TULP3O75386 442 aa18.71■□□□□ 0.59
TNFRSF1A-209ENST00000536717 APODP05090 189 aa18.71■□□□□ 0.59
TNFRSF1A-209ENST00000536717 RGS7P49802 495 aa18.71■□□□□ 0.59
TNFRSF1A-209ENST00000536717 COG7P83436 770 aa18.71■□□□□ 0.59
TNFRSF1A-209ENST00000536717 KDSRQ06136 332 aa18.71■□□□□ 0.59
TNFRSF1A-209ENST00000536717 DMC1Q14565 340 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms